RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 GPD1P21695 349 aa15.26■□□□□ 0.03
TPM3-206ENST00000330188 STX2P32856 288 aa15.26■□□□□ 0.03
TPM3-206ENST00000330188 RPL22P35268 128 aaKnown RBP15.26■□□□□ 0.03
TPM3-206ENST00000330188 GAD2Q05329 585 aa15.26■□□□□ 0.03
TPM3-206ENST00000330188 NR1H3Q13133 447 aa15.26■□□□□ 0.03
TPM3-206ENST00000330188 GRIK4Q16099 956 aa15.26■□□□□ 0.03
TPM3-206ENST00000330188 HIF1AQ16665 826 aa15.26■□□□□ 0.03
TPM3-206ENST00000330188 NUGGCQ68CJ6 796 aa15.26■□□□□ 0.03
TPM3-206ENST00000330188 CAPN12Q6ZSI9 719 aa15.26■□□□□ 0.03
TPM3-206ENST00000330188 FAM183BPQ6ZVS7 135 aa15.26■□□□□ 0.03
TPM3-206ENST00000330188 CYP4V2Q6ZWL3 525 aaPredicted RBP15.26■□□□□ 0.03
TPM3-206ENST00000330188 NT5DC4Q86YG4 428 aa15.26■□□□□ 0.03
TPM3-206ENST00000330188 RSAD2Q8WXG1 361 aa15.26■□□□□ 0.03
TPM3-206ENST00000330188 KIF12Q96FN5 646 aa15.26■□□□□ 0.03
TPM3-206ENST00000330188 PIWIL1Q96J94 861 aaKnown RBP15.26■□□□□ 0.03
TPM3-206ENST00000330188 PHACTR1Q9C0D0 580 aa15.26■□□□□ 0.03
TPM3-206ENST00000330188 FAM124BQ9H5Z6 455 aaPredicted RBP15.26■□□□□ 0.03
TPM3-206ENST00000330188 NKIRAS1Q9NYS0 192 aa15.26■□□□□ 0.03
TPM3-206ENST00000330188 TSPAN16Q9UKR8 245 aa15.26■□□□□ 0.03
TPM3-206ENST00000330188 KAT6AQ92794 2004 aa15.26■□□□□ 0.03
TPM3-206ENST00000330188 C2CD4BA6NLJ0 364 aa15.26■□□□□ 0.03
TPM3-206ENST00000330188 E5RJQ4 531 aa15.26■□□□□ 0.03
TPM3-206ENST00000330188 PIK3R2O00459 728 aa15.26■□□□□ 0.03
TPM3-206ENST00000330188 RASSF9O75901 435 aa15.26■□□□□ 0.03
TPM3-206ENST00000330188 ENDOD1O94919 500 aa15.26■□□□□ 0.03
TPM3-206ENST00000330188 GRM5P41594 1212 aa15.26■□□□□ 0.03
TPM3-206ENST00000330188 GPX6P59796 221 aa15.26■□□□□ 0.03
TPM3-206ENST00000330188 RAB6CQ53S08 254 aa15.26■□□□□ 0.03
TPM3-206ENST00000330188 SH3PXD2AQ5TCZ1 1133 aa15.26■□□□□ 0.03
TPM3-206ENST00000330188 PPP1R21Q6ZMI0 780 aa15.26■□□□□ 0.03
TPM3-206ENST00000330188 ZNF467Q7Z7K2 595 aaPredicted RBP15.26■□□□□ 0.03
TPM3-206ENST00000330188 ANKMY2Q8IV38 441 aa15.26■□□□□ 0.03
TPM3-206ENST00000330188 SLC10A4Q96EP9 437 aa15.26■□□□□ 0.03
TPM3-206ENST00000330188 MAGEB18Q96M61 343 aa15.26■□□□□ 0.03
TPM3-206ENST00000330188 TGS1Q96RS0 853 aaKnown RBP15.26■□□□□ 0.03
TPM3-206ENST00000330188 NT5C1AQ9BXI3 368 aa15.26■□□□□ 0.03
TPM3-206ENST00000330188 RAB6CQ9H0N0 254 aa15.26■□□□□ 0.03
TPM3-206ENST00000330188 UBN1Q9NPG3 1134 aa15.26■□□□□ 0.03
TPM3-206ENST00000330188 KIAA1257Q9ULG3 409 aa15.26■□□□□ 0.03
TPM3-206ENST00000330188 USP15Q9Y4E8 981 aaPredicted RBP15.26■□□□□ 0.03
TPM3-206ENST00000330188 SCN1AP35498 2009 aa15.25■□□□□ 0.03
TPM3-206ENST00000330188 CLUHO75153 1309 aa15.25■□□□□ 0.03
TPM3-206ENST00000330188 PDHXO00330 501 aa15.25■□□□□ 0.03
TPM3-206ENST00000330188 EIF3EP60228 445 aaKnown RBP15.25■□□□□ 0.03
TPM3-206ENST00000330188 FNBP1LQ5T0N5 605 aa15.25■□□□□ 0.03
TPM3-206ENST00000330188 OR6B2Q6IFH4 312 aa15.25■□□□□ 0.03
TPM3-206ENST00000330188 TRPM8Q7Z2W7 1104 aa15.25■□□□□ 0.03
TPM3-206ENST00000330188 TTC39CQ8N584 583 aa15.25■□□□□ 0.03
TPM3-206ENST00000330188 C12orf29Q8N999 325 aa15.25■□□□□ 0.03
TPM3-206ENST00000330188 RXFP2Q8WXD0 754 aa15.25■□□□□ 0.03
TPM3-206ENST00000330188 CNPY3Q9BT09 278 aa15.25■□□□□ 0.03
TPM3-206ENST00000330188 CALN1Q9BXU9 219 aa15.25■□□□□ 0.03
TPM3-206ENST00000330188 CXCL16Q9H2A7 254 aa15.25■□□□□ 0.03
TPM3-206ENST00000330188 RSAD1Q9HA92 442 aa15.25■□□□□ 0.03
TPM3-206ENST00000330188 SLC40A1Q9NP59 571 aa15.25■□□□□ 0.03
TPM3-206ENST00000330188 TCRBV7S3A2A0A539 114 aa15.25■□□□□ 0.03
TPM3-206ENST00000330188 FAM47DPA6NHR8 397 aa15.25■□□□□ 0.03
TPM3-206ENST00000330188 DNAJC8O75937 253 aaPredicted RBP15.25■□□□□ 0.03
TPM3-206ENST00000330188 YBX3P16989 372 aaKnown RBP eCLIP15.25■□□□□ 0.03
TPM3-206ENST00000330188 ARL4CP56559 192 aa15.25■□□□□ 0.03
TPM3-206ENST00000330188 MKRN3Q13064 507 aaKnown RBP15.25■□□□□ 0.03
TPM3-206ENST00000330188 MMRN1Q13201 1228 aa15.25■□□□□ 0.03
TPM3-206ENST00000330188 PKN2Q16513 984 aaKnown RBP15.25■□□□□ 0.03
TPM3-206ENST00000330188 C15orf59Q2T9L4 293 aaPredicted RBP15.25■□□□□ 0.03
TPM3-206ENST00000330188 MSS51Q4VC12 460 aa15.25■□□□□ 0.03
TPM3-206ENST00000330188 DPY19L2Q6NUT2 758 aa15.25■□□□□ 0.03
TPM3-206ENST00000330188 ZNF410Q86VK4 478 aa15.25■□□□□ 0.03
TPM3-206ENST00000330188 SGSM3Q96HU1 749 aa15.25■□□□□ 0.03
TPM3-206ENST00000330188 GBA2Q9HCG7 927 aaPredicted RBP15.25■□□□□ 0.03
TPM3-206ENST00000330188 ABCF3Q9NUQ8 709 aa15.25■□□□□ 0.03
TPM3-206ENST00000330188 ZMYND8Q9ULU4 1186 aaPredicted RBP15.25■□□□□ 0.03
TPM3-206ENST00000330188 SLC12A4Q9UP95 1085 aa15.25■□□□□ 0.03
TPM3-206ENST00000330188 E7ESA3 106 aa15.24■□□□□ 0.03
TPM3-206ENST00000330188 MCF2LO15068 1137 aa15.24■□□□□ 0.03
TPM3-206ENST00000330188 PRPF4O43172 522 aaKnown RBP eCLIP15.24■□□□□ 0.03
TPM3-206ENST00000330188 SPAG7O75391 227 aa15.24■□□□□ 0.03
TPM3-206ENST00000330188 TMEM63AO94886 807 aa15.24■□□□□ 0.03
TPM3-206ENST00000330188 MMP3P08254 477 aa15.24■□□□□ 0.03
TPM3-206ENST00000330188 RBP3P10745 1247 aa15.24■□□□□ 0.03
TPM3-206ENST00000330188 HOXD8P13378 290 aaPredicted RBP15.24■□□□□ 0.03
TPM3-206ENST00000330188 PDGFRAP16234 1089 aa15.24■□□□□ 0.03
TPM3-206ENST00000330188 SMPD1P17405 629 aa15.24■□□□□ 0.03
TPM3-206ENST00000330188 CDH6P55285 790 aa15.24■□□□□ 0.03
TPM3-206ENST00000330188 WDR4P57081 412 aaKnown RBP15.24■□□□□ 0.03
TPM3-206ENST00000330188 RASA2Q15283 850 aa15.24■□□□□ 0.03
TPM3-206ENST00000330188 GOLGA7BQ2TAP0 167 aa15.24■□□□□ 0.03
TPM3-206ENST00000330188 EFHC2Q5JST6 749 aa15.24■□□□□ 0.03
TPM3-206ENST00000330188 FAM71DQ8N9W8 422 aa15.24■□□□□ 0.03
TPM3-206ENST00000330188 WDR83Q9BRX9 315 aaKnown RBP15.24■□□□□ 0.03
TPM3-206ENST00000330188 MIS12Q9H081 205 aa15.24■□□□□ 0.03
TPM3-206ENST00000330188 PPCSQ9HAB8 311 aa15.24■□□□□ 0.03
TPM3-206ENST00000330188 KIF9Q9HAQ2 790 aa15.24■□□□□ 0.03
TPM3-206ENST00000330188 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.24■□□□□ 0.03
TPM3-206ENST00000330188 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.24■□□□□ 0.032e-12■■□□□ 14
TPM3-206ENST00000330188 SLC24A2Q9UI40 661 aa15.24■□□□□ 0.03
TPM3-206ENST00000330188 BTBD19C9JJ37 291 aa15.23■□□□□ 0.03
TPM3-206ENST00000330188 STRNO43815 780 aa15.23■□□□□ 0.03
TPM3-206ENST00000330188 NPTXRO95502 500 aa15.23■□□□□ 0.03
TPM3-206ENST00000330188 GSTA1P08263 222 aa15.23■□□□□ 0.03
TPM3-206ENST00000330188 TAC1P20366 129 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms