RNA–Protein interactions for RNA: ENST00000329291.5

PGBD2-201, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PGBD2, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-201ENST00000329291 CCDC142Q17RM4 750 aa16.67■□□□□ 0.26
PGBD2-201ENST00000329291 CYP4V2Q6ZWL3 525 aaPredicted RBP16.67■□□□□ 0.26
PGBD2-201ENST00000329291 LIMS2Q7Z4I7 341 aa16.67■□□□□ 0.26
PGBD2-201ENST00000329291 CCDC25Q86WR0 208 aa16.67■□□□□ 0.26
PGBD2-201ENST00000329291 SNF8Q96H20 258 aa16.67■□□□□ 0.26
PGBD2-201ENST00000329291 C10orf88Q9H8K7 445 aa16.67■□□□□ 0.26
PGBD2-201ENST00000329291 DNAJC17Q9NVM6 304 aaKnown RBP16.67■□□□□ 0.26
PGBD2-201ENST00000329291 MTRF1LQ9UGC7 380 aaKnown RBP16.67■□□□□ 0.26
PGBD2-201ENST00000329291 FEZ2Q9UHY8 353 aaPredicted RBP16.67■□□□□ 0.26
PGBD2-201ENST00000329291 TRPV2Q9Y5S1 764 aa16.67■□□□□ 0.26
PGBD2-201ENST00000329291 GAS8O95995 478 aa16.66■□□□□ 0.26
PGBD2-201ENST00000329291 RPLP2P05387 115 aaKnown RBP16.66■□□□□ 0.26
PGBD2-201ENST00000329291 PDGFRAP16234 1089 aa16.66■□□□□ 0.26
PGBD2-201ENST00000329291 CETN2P41208 172 aa16.66■□□□□ 0.26
PGBD2-201ENST00000329291 DYNLT1P63172 113 aa16.66■□□□□ 0.26
PGBD2-201ENST00000329291 BYSLQ13895 437 aaKnown RBP16.66■□□□□ 0.26
PGBD2-201ENST00000329291 TAZQ16635 292 aa16.66■□□□□ 0.26
PGBD2-201ENST00000329291 SKIDA1Q1XH10 827 aa16.66■□□□□ 0.26
PGBD2-201ENST00000329291 SPDYCQ5MJ68 293 aa16.66■□□□□ 0.26
PGBD2-201ENST00000329291 OLFML1Q6UWY5 402 aa16.66■□□□□ 0.26
PGBD2-201ENST00000329291 UNC93AQ86WB7 457 aa16.66■□□□□ 0.26
PGBD2-201ENST00000329291 GSTCDQ8NEC7 633 aa16.66■□□□□ 0.26
PGBD2-201ENST00000329291 CFHR5Q9BXR6 569 aa16.66■□□□□ 0.26
PGBD2-201ENST00000329291 GDAP2Q9NXN4 497 aa16.66■□□□□ 0.26
PGBD2-201ENST00000329291 BCCIPQ9P287 314 aaKnown RBP eCLIP16.66■□□□□ 0.26
PGBD2-201ENST00000329291 SRRDQ9UH36 339 aa16.66■□□□□ 0.26
PGBD2-201ENST00000329291 USP18Q9UMW8 372 aa16.66■□□□□ 0.26
PGBD2-201ENST00000329291 GRIN2DO15399 1336 aa16.66■□□□□ 0.26
PGBD2-201ENST00000329291 PAPSS1O43252 624 aaPredicted RBP16.66■□□□□ 0.26
PGBD2-201ENST00000329291 SHOX2O60902 331 aaPredicted RBP16.66■□□□□ 0.26
PGBD2-201ENST00000329291 TRPA1O75762 1119 aa16.66■□□□□ 0.26
PGBD2-201ENST00000329291 ASGR1P07306 291 aa16.66■□□□□ 0.26
PGBD2-201ENST00000329291 ATF2P15336 505 aa16.66■□□□□ 0.26
PGBD2-201ENST00000329291 LILRA4P59901 499 aa16.66■□□□□ 0.26
PGBD2-201ENST00000329291 STILQ15468 1287 aa16.66■□□□□ 0.26
PGBD2-201ENST00000329291 KCNA10Q16322 511 aa16.66■□□□□ 0.26
PGBD2-201ENST00000329291 CCDC14Q49A88 953 aa16.66■□□□□ 0.26
PGBD2-201ENST00000329291 ODF2Q5BJF6 829 aa16.66■□□□□ 0.26
PGBD2-201ENST00000329291 LRRC31Q6UY01 552 aa16.66■□□□□ 0.26
PGBD2-201ENST00000329291 TMEM110Q86TL2 294 aa16.66■□□□□ 0.26
PGBD2-201ENST00000329291 OSTM1Q86WC4 334 aa16.66■□□□□ 0.26
PGBD2-201ENST00000329291 CRYBG2Q8N1P7 616 aa16.66■□□□□ 0.26
PGBD2-201ENST00000329291 CMASQ8NFW8 434 aaPredicted RBP16.66■□□□□ 0.26
PGBD2-201ENST00000329291 IPO4Q8TEX9 1081 aaKnown RBP16.66■□□□□ 0.26
PGBD2-201ENST00000329291 CLEC4CQ8WTT0 213 aa16.66■□□□□ 0.26
PGBD2-201ENST00000329291 HSPH1Q92598 858 aa16.66■□□□□ 0.26
PGBD2-201ENST00000329291 DDX23Q9BUQ8 820 aaKnown RBP16.66■□□□□ 0.26
PGBD2-201ENST00000329291 MIOSQ9NXC5 875 aa16.66■□□□□ 0.26
PGBD2-201ENST00000329291 KRT7P08729 469 aa16.65■□□□□ 0.26
PGBD2-201ENST00000329291 NUDT17P0C025 328 aa16.65■□□□□ 0.26
PGBD2-201ENST00000329291 RARGP13631 454 aa16.65■□□□□ 0.26
PGBD2-201ENST00000329291 GPD1P21695 349 aa16.65■□□□□ 0.26
PGBD2-201ENST00000329291 ADORA2BP29275 332 aa16.65■□□□□ 0.26
PGBD2-201ENST00000329291 IRAK1P51617 712 aa16.65■□□□□ 0.26
PGBD2-201ENST00000329291 SKOR1P84550 965 aa16.65■□□□□ 0.26
PGBD2-201ENST00000329291 OASLQ15646 514 aaKnown RBP16.65■□□□□ 0.26
PGBD2-201ENST00000329291 HADHQ16836 314 aaKnown RBP16.65■□□□□ 0.26
PGBD2-201ENST00000329291 ARHGAP17Q68EM7 881 aa16.65■□□□□ 0.26
PGBD2-201ENST00000329291 GSTA5Q7RTV2 222 aa16.65■□□□□ 0.26
PGBD2-201ENST00000329291 PCSK9Q8NBP7 692 aaKnown RBP16.65■□□□□ 0.26
PGBD2-201ENST00000329291 KLHDC9Q8NEP7 349 aa16.65■□□□□ 0.26
PGBD2-201ENST00000329291 LPPQ93052 612 aa16.65■□□□□ 0.26
PGBD2-201ENST00000329291 CFAP57Q96MR6 1250 aa16.65■□□□□ 0.26
PGBD2-201ENST00000329291 PPP1R10Q96QC0 940 aaKnown RBP16.65■□□□□ 0.26
PGBD2-201ENST00000329291 TSPAN18Q96SJ8 248 aa16.65■□□□□ 0.26
PGBD2-201ENST00000329291 CNPY3Q9BT09 278 aa16.65■□□□□ 0.26
PGBD2-201ENST00000329291 MIS12Q9H081 205 aa16.65■□□□□ 0.26
PGBD2-201ENST00000329291 ADAM7Q9H2U9 754 aa16.65■□□□□ 0.26
PGBD2-201ENST00000329291 AGO3Q9H9G7 860 aaKnown RBP16.65■□□□□ 0.26
PGBD2-201ENST00000329291 ANAPC5Q9UJX4 755 aa16.65■□□□□ 0.26
PGBD2-201ENST00000329291 ZNF148Q9UQR1 794 aa16.65■□□□□ 0.26
PGBD2-201ENST00000329291 SCN10AQ9Y5Y9 1956 aa16.65■□□□□ 0.26
PGBD2-201ENST00000329291 HMGB1P1B2RPK0 211 aaPredicted RBP16.64■□□□□ 0.25
PGBD2-201ENST00000329291 RIPK2O43353 540 aa16.64■□□□□ 0.25
PGBD2-201ENST00000329291 XPOTO43592 962 aaKnown RBP16.64■□□□□ 0.25
PGBD2-201ENST00000329291 CST8O60676 142 aa16.64■□□□□ 0.25
PGBD2-201ENST00000329291 CAND2O75155 1236 aa16.64■□□□□ 0.25
PGBD2-201ENST00000329291 ATP2C2O75185 946 aa16.64■□□□□ 0.25
PGBD2-201ENST00000329291 RPS6KA5O75582 802 aa16.64■□□□□ 0.25
PGBD2-201ENST00000329291 TFE3P19532 575 aaPredicted RBP16.64■□□□□ 0.25
PGBD2-201ENST00000329291 ACTN2P35609 894 aa16.64■□□□□ 0.25
PGBD2-201ENST00000329291 TAF6P49848 677 aa16.64■□□□□ 0.25
PGBD2-201ENST00000329291 IFFO1Q0D2I5 559 aa16.64■□□□□ 0.25
PGBD2-201ENST00000329291 MMRN1Q13201 1228 aa16.64■□□□□ 0.25
PGBD2-201ENST00000329291 CDO1Q16878 200 aa16.64■□□□□ 0.25
PGBD2-201ENST00000329291 KRT71Q3SY84 523 aa16.64■□□□□ 0.25
PGBD2-201ENST00000329291 EMC10Q5UCC4 262 aa16.64■□□□□ 0.25
PGBD2-201ENST00000329291 DRICH1Q6PGQ1 229 aaPredicted RBP16.64■□□□□ 0.25
PGBD2-201ENST00000329291 ZNF365Q70YC5 407 aa16.64■□□□□ 0.25
PGBD2-201ENST00000329291 SERINC5Q86VE9 423 aa16.64■□□□□ 0.25
PGBD2-201ENST00000329291 CD99L2Q8TCZ2 262 aa16.64■□□□□ 0.25
PGBD2-201ENST00000329291 SENP6Q9GZR1 1112 aaPredicted RBP16.64■□□□□ 0.25
PGBD2-201ENST00000329291 ASNSD1Q9NWL6 643 aa16.64■□□□□ 0.25
PGBD2-201ENST00000329291 PRDM4Q9UKN5 801 aa16.64■□□□□ 0.25
PGBD2-201ENST00000329291 GOLGA6L10A6NI86 522 aa16.64■□□□□ 0.25
PGBD2-201ENST00000329291 RNF8O76064 485 aa16.64■□□□□ 0.25
PGBD2-201ENST00000329291 NR1D1P20393 614 aa16.64■□□□□ 0.25
PGBD2-201ENST00000329291 CST5P28325 142 aaPredicted RBP16.64■□□□□ 0.25
PGBD2-201ENST00000329291 VCPP55072 806 aaKnown RBP16.64■□□□□ 0.25
PGBD2-201ENST00000329291 ATP11AP98196 1134 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms