RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 TJP2Q9UDY2 1190 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 COG5Q9UP83 839 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 CDY1Q9Y6F8 540 aa10.81□□□□□ -0.68
VIPAS39-201ENST00000327028 TCRBV5S1A1TA0A578 114 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 MTMR11A4FU01 709 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 C2CD2LO14523 706 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 BUB1O43683 1085 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 BEST1O76090 585 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 ARHGEF15O94989 841 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 MOCS3O95396 460 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 TUBB4AP04350 444 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 CTSAP10619 480 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 BDNFP23560 247 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 BMP8BP34820 402 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 CACNA2D1P54289 1103 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 DNAJC24Q6P3W2 148 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 PIGZQ86VD9 579 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 C3orf20Q8ND61 904 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 ZMIZ2Q8NF64 920 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 CLSTN3Q9BQT9 956 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 C17orf80Q9BSJ5 609 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 IRX2Q9BZI1 471 aaPredicted RBP10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 MRPL47Q9HD33 250 aaKnown RBP10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 PNPLA8Q9NP80 782 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 MRPL17Q9NRX2 175 aaKnown RBP10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 PARVAQ9NVD7 372 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 ABI2Q9NYB9 513 aaPredicted RBP10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 SSX2IPQ9Y2D8 614 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 GABBR2O75899 941 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 RB1P06400 928 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 CA3P07451 260 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 NOP2P46087 812 aaKnown RBP10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 ARPP19P56211 112 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 ETF1P62495 437 aaKnown RBP10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 ROR1Q01973 937 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 UBE3AQ05086 875 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 MAMLD1Q13495 774 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 LLGL2Q6P1M3 1020 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 VSTM1Q6UX27 236 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 ZDHHC17Q8IUH5 632 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 TRIM58Q8NG06 486 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 TPCN2Q8NHX9 752 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 ZNF564Q8TBZ8 553 aaPredicted RBP10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 SPPL2BQ8TCT7 592 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 MCRS1Q96EZ8 462 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 ALS2CR12Q96Q35 445 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 RXFP1Q9HBX9 757 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 OSGEPQ9NPF4 335 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 FNIP2Q9P278 1114 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 CHORDC1Q9UHD1 332 aaPredicted RBP10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 YBX2Q9Y2T7 364 aaKnown RBP10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 PCDHGC5Q9Y5F6 944 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 CAPN6Q9Y6Q1 641 aa10.8□□□□□ -0.68
VIPAS39-201ENST00000327028 HHLA1C9JL84 531 aa10.79□□□□□ -0.68
VIPAS39-201ENST00000327028 ADAM12O43184 909 aa10.79□□□□□ -0.68
VIPAS39-201ENST00000327028 LILRB3O75022 631 aa10.79□□□□□ -0.68
VIPAS39-201ENST00000327028 RPL17P18621 184 aaKnown RBP10.79□□□□□ -0.68
VIPAS39-201ENST00000327028 OR1D2P34982 312 aa10.79□□□□□ -0.68
VIPAS39-201ENST00000327028 CDR1P51861 262 aa10.79□□□□□ -0.68
VIPAS39-201ENST00000327028 NAP1L1P55209 391 aaKnown RBP10.79□□□□□ -0.68
VIPAS39-201ENST00000327028 GNG11P61952 73 aa10.79□□□□□ -0.68
VIPAS39-201ENST00000327028 TAP1Q03518 808 aa10.79□□□□□ -0.68
VIPAS39-201ENST00000327028 ZNF569Q5MCW4 686 aa10.79□□□□□ -0.68
VIPAS39-201ENST00000327028 RNF19BQ6ZMZ0 732 aa10.79□□□□□ -0.68
VIPAS39-201ENST00000327028 FAM183BPQ6ZVS7 135 aa10.79□□□□□ -0.68
VIPAS39-201ENST00000327028 PHLDB2Q86SQ0 1253 aa10.79□□□□□ -0.68
VIPAS39-201ENST00000327028 TGS1Q96RS0 853 aaKnown RBP10.79□□□□□ -0.68
VIPAS39-201ENST00000327028 C11orf84Q9BUA3 381 aaPredicted RBP10.79□□□□□ -0.68
VIPAS39-201ENST00000327028 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.79□□□□□ -0.68
VIPAS39-201ENST00000327028 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.79□□□□□ -0.68
VIPAS39-201ENST00000327028 WDR27A2RRH5 827 aa10.79□□□□□ -0.68
VIPAS39-201ENST00000327028 TRIM66O15016 1216 aa10.79□□□□□ -0.68
VIPAS39-201ENST00000327028 VNN2O95498 520 aa10.79□□□□□ -0.68
VIPAS39-201ENST00000327028 CYP2F1P24903 491 aa10.79□□□□□ -0.68
VIPAS39-201ENST00000327028 DNAJB2P25686 324 aa10.79□□□□□ -0.68
VIPAS39-201ENST00000327028 SCNN1AP37088 669 aa10.79□□□□□ -0.68
VIPAS39-201ENST00000327028 RGS19P49795 217 aa10.79□□□□□ -0.68
VIPAS39-201ENST00000327028 NDUFV1P49821 464 aa10.79□□□□□ -0.68
VIPAS39-201ENST00000327028 ERVK-21P61565 698 aa10.79□□□□□ -0.68
VIPAS39-201ENST00000327028 RAB30Q15771 203 aa10.79□□□□□ -0.68
VIPAS39-201ENST00000327028 RAB41Q5JT25 222 aa10.79□□□□□ -0.68
VIPAS39-201ENST00000327028 PPP1R15BQ5SWA1 713 aa10.79□□□□□ -0.68
VIPAS39-201ENST00000327028 TPGS2Q68CL5 300 aa10.79□□□□□ -0.68
VIPAS39-201ENST00000327028 OR6B2Q6IFH4 312 aa10.79□□□□□ -0.68
VIPAS39-201ENST00000327028 OLFML1Q6UWY5 402 aa10.79□□□□□ -0.68
VIPAS39-201ENST00000327028 C8orf48Q96LL4 319 aa10.79□□□□□ -0.68
VIPAS39-201ENST00000327028 PGLYRP2Q96PD5 576 aa10.79□□□□□ -0.68
VIPAS39-201ENST00000327028 KCNK16Q96T55 309 aa10.79□□□□□ -0.68
VIPAS39-201ENST00000327028 LRRC4Q9HBW1 653 aa10.79□□□□□ -0.68
VIPAS39-201ENST00000327028 AFF4Q9UHB7 1163 aaKnown RBP10.79□□□□□ -0.68
VIPAS39-201ENST00000327028 GRID2IPA4D2P6 1211 aa10.78□□□□□ -0.68
VIPAS39-201ENST00000327028 F8VP50 259 aa10.78□□□□□ -0.68
VIPAS39-201ENST00000327028 GOLGA8SH3BPF8 625 aa10.78□□□□□ -0.68
VIPAS39-201ENST00000327028 PAPSS1O43252 624 aaPredicted RBP10.78□□□□□ -0.68
VIPAS39-201ENST00000327028 ADIGQ0VDE8 80 aa10.78□□□□□ -0.68
VIPAS39-201ENST00000327028 C11orf63Q6NUN7 778 aa10.78□□□□□ -0.68
VIPAS39-201ENST00000327028 SIX6OS1Q8N1H7 587 aa10.78□□□□□ -0.68
VIPAS39-201ENST00000327028 SLC35F6Q8N357 371 aa10.78□□□□□ -0.68
VIPAS39-201ENST00000327028 LRRC57Q8N9N7 239 aa10.78□□□□□ -0.68
VIPAS39-201ENST00000327028 ATAD1Q8NBU5 361 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms