RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 ARSAP15289 507 aa18.88■□□□□ 0.61
PTPMT1-201ENST00000326656 PTPN1P18031 435 aaKnown RBP18.88■□□□□ 0.61
PTPMT1-201ENST00000326656 IFNAR2P48551 515 aa18.88■□□□□ 0.61
PTPMT1-201ENST00000326656 GALK1P51570 392 aa18.88■□□□□ 0.61
PTPMT1-201ENST00000326656 CUL4BQ13620 913 aa18.88■□□□□ 0.61
PTPMT1-201ENST00000326656 CCDC142Q17RM4 750 aa18.88■□□□□ 0.61
PTPMT1-201ENST00000326656 FOXD4L5Q5VV16 416 aaPredicted RBP18.88■□□□□ 0.61
PTPMT1-201ENST00000326656 PRR23BQ6ZRT6 265 aa18.88■□□□□ 0.61
PTPMT1-201ENST00000326656 SLC9A9Q8IVB4 645 aa18.88■□□□□ 0.61
PTPMT1-201ENST00000326656 ARL14EPQ8N8R7 260 aaPredicted RBP18.88■□□□□ 0.61
PTPMT1-201ENST00000326656 RIN3Q8TB24 985 aa18.88■□□□□ 0.61
PTPMT1-201ENST00000326656 FOXD4L4Q8WXT5 416 aaPredicted RBP18.88■□□□□ 0.61
PTPMT1-201ENST00000326656 ZNF516Q92618 1163 aa18.88■□□□□ 0.61
PTPMT1-201ENST00000326656 CHFRQ96EP1 664 aa18.88■□□□□ 0.61
PTPMT1-201ENST00000326656 SLC22A12Q96S37 553 aa18.88■□□□□ 0.61
PTPMT1-201ENST00000326656 ELOVL4Q9GZR5 314 aa18.88■□□□□ 0.61
PTPMT1-201ENST00000326656 USP18Q9UMW8 372 aa18.88■□□□□ 0.61
PTPMT1-201ENST00000326656 AKAP3O75969 853 aa18.87■□□□□ 0.61
PTPMT1-201ENST00000326656 AFMP43652 599 aa18.87■□□□□ 0.61
PTPMT1-201ENST00000326656 DMWDQ09019 674 aa18.87■□□□□ 0.61
PTPMT1-201ENST00000326656 EML3Q32P44 896 aa18.87■□□□□ 0.61
PTPMT1-201ENST00000326656 HEATR6Q6AI08 1181 aaKnown RBP18.87■□□□□ 0.61
PTPMT1-201ENST00000326656 SH3RF2Q8TEC5 729 aa18.87■□□□□ 0.61
PTPMT1-201ENST00000326656 LOXL4Q96JB6 756 aa18.87■□□□□ 0.61
PTPMT1-201ENST00000326656 MRPL45Q9BRJ2 306 aaKnown RBP18.87■□□□□ 0.61
PTPMT1-201ENST00000326656 GZF1Q9H116 711 aaPredicted RBP18.87■□□□□ 0.61
PTPMT1-201ENST00000326656 XYLT2Q9H1B5 865 aa18.87■□□□□ 0.61
PTPMT1-201ENST00000326656 PARD6AQ9NPB6 346 aa18.87■□□□□ 0.61
PTPMT1-201ENST00000326656 C2orf42Q9NWW7 574 aa18.87■□□□□ 0.61
PTPMT1-201ENST00000326656 CDV3Q9UKY7 258 aaKnown RBP18.87■□□□□ 0.61
PTPMT1-201ENST00000326656 SLC8A2Q9UPR5 921 aa18.87■□□□□ 0.61
PTPMT1-201ENST00000326656 C2orf78A6NCI8 922 aa18.86■□□□□ 0.61
PTPMT1-201ENST00000326656 ZNF840PA6NDX5 716 aa18.86■□□□□ 0.61
PTPMT1-201ENST00000326656 PHACTR2O75167 634 aa18.86■□□□□ 0.61
PTPMT1-201ENST00000326656 NFATC1O95644 943 aa18.86■□□□□ 0.61
PTPMT1-201ENST00000326656 CMA1P23946 247 aa18.86■□□□□ 0.61
PTPMT1-201ENST00000326656 CASP1P29466 404 aa18.86■□□□□ 0.61
PTPMT1-201ENST00000326656 MYL6P60660 151 aa18.86■□□□□ 0.61
PTPMT1-201ENST00000326656 SLC7A9P82251 487 aa18.86■□□□□ 0.61
PTPMT1-201ENST00000326656 SPEM2Q0P670 501 aa18.86■□□□□ 0.61
PTPMT1-201ENST00000326656 CSRP2Q16527 193 aa18.86■□□□□ 0.61
PTPMT1-201ENST00000326656 FOXD4L6Q3SYB3 417 aaPredicted RBP18.86■□□□□ 0.61
PTPMT1-201ENST00000326656 MDH1BQ5I0G3 518 aa18.86■□□□□ 0.61
PTPMT1-201ENST00000326656 TDRD10Q5VZ19 366 aaKnown RBP18.86■□□□□ 0.61
PTPMT1-201ENST00000326656 FOXD4L3Q6VB84 417 aaPredicted RBP18.86■□□□□ 0.61
PTPMT1-201ENST00000326656 CEP68Q76N32 757 aa18.86■□□□□ 0.61
PTPMT1-201ENST00000326656 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.86■□□□□ 0.61
PTPMT1-201ENST00000326656 PARD3BQ8TEW8 1205 aa18.86■□□□□ 0.61
PTPMT1-201ENST00000326656 GAB3Q8WWW8 586 aa18.86■□□□□ 0.61
PTPMT1-201ENST00000326656 CD101Q93033 1021 aa18.86■□□□□ 0.61
PTPMT1-201ENST00000326656 RTKNQ9BST9 563 aa18.86■□□□□ 0.61
PTPMT1-201ENST00000326656 DMAC2Q9NW81 257 aa18.86■□□□□ 0.61
PTPMT1-201ENST00000326656 RALGAPA1Q6GYQ0 2036 aa18.85■□□□□ 0.61
PTPMT1-201ENST00000326656 HELZP42694 1942 aaKnown RBP18.85■□□□□ 0.61
PTPMT1-201ENST00000326656 A8MXQ7 604 aa18.85■□□□□ 0.61
PTPMT1-201ENST00000326656 F8VP50 259 aa18.85■□□□□ 0.61
PTPMT1-201ENST00000326656 PDXKO00764 312 aa18.85■□□□□ 0.61
PTPMT1-201ENST00000326656 SLC9A3R1O14745 358 aaPredicted RBP18.85■□□□□ 0.61
PTPMT1-201ENST00000326656 KLRC4O43908 158 aa18.85■□□□□ 0.61
PTPMT1-201ENST00000326656 OLFM2O95897 454 aa18.85■□□□□ 0.61
PTPMT1-201ENST00000326656 EGFP01133 1207 aa18.85■□□□□ 0.61
PTPMT1-201ENST00000326656 ATXN1P54253 815 aaKnown RBP18.85■□□□□ 0.61
PTPMT1-201ENST00000326656 DNM1Q05193 864 aaKnown RBP18.85■□□□□ 0.61
PTPMT1-201ENST00000326656 LPAL2Q16609 132 aa18.85■□□□□ 0.61
PTPMT1-201ENST00000326656 SYT13Q7L8C5 426 aa18.85■□□□□ 0.61
PTPMT1-201ENST00000326656 B3GALNT2Q8NCR0 500 aa18.85■□□□□ 0.61
PTPMT1-201ENST00000326656 PAGE5Q96GU1 130 aa18.85■□□□□ 0.61
PTPMT1-201ENST00000326656 SLITRK1Q96PX8 696 aa18.85■□□□□ 0.61
PTPMT1-201ENST00000326656 FBRSL1Q9HCM7 1045 aaKnown RBP18.85■□□□□ 0.61
PTPMT1-201ENST00000326656 SEMA4GQ9NTN9 838 aa18.85■□□□□ 0.61
PTPMT1-201ENST00000326656 NXF1Q9UBU9 619 aaKnown RBP18.85■□□□□ 0.61
PTPMT1-201ENST00000326656 SERTAD1Q9UHV2 236 aa18.85■□□□□ 0.61
PTPMT1-201ENST00000326656 WNT6Q9Y6F9 365 aa18.85■□□□□ 0.61
PTPMT1-201ENST00000326656 NCOR2Q9Y618 2525 aa18.84■□□□□ 0.61
PTPMT1-201ENST00000326656 DNAH14Q0VDD8 3507 aa18.84■□□□□ 0.61
PTPMT1-201ENST00000326656 SPAG17Q6Q759 2223 aa18.84■□□□□ 0.61
PTPMT1-201ENST00000326656 ATP8B3O60423 1300 aa18.84■□□□□ 0.61
PTPMT1-201ENST00000326656 RNF40O75150 1001 aa18.84■□□□□ 0.61
PTPMT1-201ENST00000326656 RTN3O95197 1032 aaPredicted RBP18.84■□□□□ 0.61
PTPMT1-201ENST00000326656 RPN1P04843 607 aaKnown RBP18.84■□□□□ 0.61
PTPMT1-201ENST00000326656 USP46P62068 366 aa18.84■□□□□ 0.61
PTPMT1-201ENST00000326656 STK4Q13043 487 aa18.84■□□□□ 0.61
PTPMT1-201ENST00000326656 PKN3Q6P5Z2 889 aa18.84■□□□□ 0.61
PTPMT1-201ENST00000326656 CACNA2D4Q7Z3S7 1137 aa18.84■□□□□ 0.61
PTPMT1-201ENST00000326656 NUP93Q8N1F7 819 aa18.84■□□□□ 0.61
PTPMT1-201ENST00000326656 PDZD8Q8NEN9 1154 aa18.84■□□□□ 0.61
PTPMT1-201ENST00000326656 OVCA2Q8WZ82 227 aa18.84■□□□□ 0.61
PTPMT1-201ENST00000326656 ACDQ96AP0 544 aa18.84■□□□□ 0.61
PTPMT1-201ENST00000326656 TNIP3Q96KP6 325 aa18.84■□□□□ 0.61
PTPMT1-201ENST00000326656 EXOC1Q9NV70 894 aa18.84■□□□□ 0.61
PTPMT1-201ENST00000326656 NME7Q9Y5B8 376 aa18.84■□□□□ 0.61
PTPMT1-201ENST00000326656 ATG2BQ96BY7 2078 aa18.83■□□□□ 0.61
PTPMT1-201ENST00000326656 LEFTY2O00292 366 aa18.83■□□□□ 0.6
PTPMT1-201ENST00000326656 IKBKBO14920 756 aa18.83■□□□□ 0.6
PTPMT1-201ENST00000326656 ACTN4O43707 911 aaKnown RBP18.83■□□□□ 0.6
PTPMT1-201ENST00000326656 RPP40O75818 363 aaKnown RBP18.83■□□□□ 0.6
PTPMT1-201ENST00000326656 KIF20AO95235 890 aa18.83■□□□□ 0.6
PTPMT1-201ENST00000326656 C4BPAP04003 597 aaKnown RBP18.83■□□□□ 0.6
PTPMT1-201ENST00000326656 P4HA1P13674 534 aa18.83■□□□□ 0.6
PTPMT1-201ENST00000326656 TAF10Q12962 218 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms