RNA–Protein interactions for RNA: ENST00000324659.12

NLRC3-201, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 5 BASIC

Gene NLRC3, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-201ENST00000324659 PSMA2P25787 234 aa12.62□□□□□ -0.39
NLRC3-201ENST00000324659 TNFSF9P41273 254 aa12.62□□□□□ -0.39
NLRC3-201ENST00000324659 YWHAGP61981 247 aaKnown RBP eCLIP12.62□□□□□ -0.39
NLRC3-201ENST00000324659 C15orf39Q6ZRI6 1047 aa12.62□□□□□ -0.39
NLRC3-201ENST00000324659 CTAGE3PQ8IX95 158 aa12.62□□□□□ -0.39
NLRC3-201ENST00000324659 INPP5DQ92835 1189 aa12.62□□□□□ -0.39
NLRC3-201ENST00000324659 OPTNQ96CV9 577 aa12.62□□□□□ -0.39
NLRC3-201ENST00000324659 TSSK1BQ9BXA7 367 aa12.62□□□□□ -0.39
NLRC3-201ENST00000324659 CALN1Q9BXU9 219 aa12.62□□□□□ -0.39
NLRC3-201ENST00000324659 JPH1Q9HDC5 661 aaPredicted RBP12.62□□□□□ -0.39
NLRC3-201ENST00000324659 KANSL3Q9P2N6 904 aa12.62□□□□□ -0.39
NLRC3-201ENST00000324659 IKBKGQ9Y6K9 419 aa12.62□□□□□ -0.39
NLRC3-201ENST00000324659 TMEM191CA6NGB0 347 aa12.61□□□□□ -0.39
NLRC3-201ENST00000324659 NFKBIEO00221 500 aa12.61□□□□□ -0.39
NLRC3-201ENST00000324659 NOP56O00567 594 aaKnown RBP12.61□□□□□ -0.39
NLRC3-201ENST00000324659 CAPN9O14815 690 aa12.61□□□□□ -0.39
NLRC3-201ENST00000324659 ZC3H11AO75152 810 aaKnown RBP eCLIP12.61□□□□□ -0.39
NLRC3-201ENST00000324659 AVILO75366 819 aa12.61□□□□□ -0.39
NLRC3-201ENST00000324659 FAM155BO75949 473 aa12.61□□□□□ -0.39
NLRC3-201ENST00000324659 MT-ND3P03897 115 aa12.61□□□□□ -0.39
NLRC3-201ENST00000324659 TMEM191BP0C7N4 346 aa12.61□□□□□ -0.39
NLRC3-201ENST00000324659 ARFIP2P53365 341 aa12.61□□□□□ -0.39
NLRC3-201ENST00000324659 ARL4CP56559 192 aa12.61□□□□□ -0.39
NLRC3-201ENST00000324659 MCL1Q07820 350 aa12.61□□□□□ -0.39
NLRC3-201ENST00000324659 PSMD6Q15008 389 aa12.61□□□□□ -0.39
NLRC3-201ENST00000324659 MOB2Q70IA6 237 aa12.61□□□□□ -0.39
NLRC3-201ENST00000324659 SAMD3Q8N6K7 520 aa12.61□□□□□ -0.39
NLRC3-201ENST00000324659 ATP11CQ8NB49 1132 aa12.61□□□□□ -0.39
NLRC3-201ENST00000324659 ASAP3Q8TDY4 903 aa12.61□□□□□ -0.39
NLRC3-201ENST00000324659 CPT1BQ92523 772 aa12.61□□□□□ -0.39
NLRC3-201ENST00000324659 STMN2Q93045 179 aa12.61□□□□□ -0.39
NLRC3-201ENST00000324659 TRIM55Q9BYV6 548 aa12.61□□□□□ -0.39
NLRC3-201ENST00000324659 MTMR12Q9C0I1 747 aa12.61□□□□□ -0.39
NLRC3-201ENST00000324659 TTLL13PA6NNM8 815 aa12.61□□□□□ -0.39
NLRC3-201ENST00000324659 CSDE1O75534 798 aaKnown RBP12.61□□□□□ -0.39
NLRC3-201ENST00000324659 DGAT1O75907 488 aa12.61□□□□□ -0.39
NLRC3-201ENST00000324659 WFS1O76024 890 aa12.61□□□□□ -0.39
NLRC3-201ENST00000324659 TMEM63AO94886 807 aa12.61□□□□□ -0.39
NLRC3-201ENST00000324659 MMP8P22894 467 aa12.61□□□□□ -0.39
NLRC3-201ENST00000324659 PHBP35232 272 aa12.61□□□□□ -0.39
NLRC3-201ENST00000324659 LBRQ14739 615 aaKnown RBP12.61□□□□□ -0.39
NLRC3-201ENST00000324659 TAF5Q15542 800 aa12.61□□□□□ -0.39
NLRC3-201ENST00000324659 OASLQ15646 514 aaKnown RBP12.61□□□□□ -0.39
NLRC3-201ENST00000324659 SMAD1Q15797 465 aaKnown RBP12.61□□□□□ -0.39
NLRC3-201ENST00000324659 NIPA1Q7RTP0 329 aa12.61□□□□□ -0.39
NLRC3-201ENST00000324659 PHF13Q86YI8 300 aaPredicted RBP12.61□□□□□ -0.39
NLRC3-201ENST00000324659 RELL1Q8IUW5 271 aa12.61□□□□□ -0.39
NLRC3-201ENST00000324659 TMEM120AQ9BXJ8 343 aa12.61□□□□□ -0.39
NLRC3-201ENST00000324659 SENP1Q9P0U3 644 aa12.61□□□□□ -0.39
NLRC3-201ENST00000324659 NXF1Q9UBU9 619 aaKnown RBP12.61□□□□□ -0.39
NLRC3-201ENST00000324659 SLC9A2Q9UBY0 812 aa12.61□□□□□ -0.39
NLRC3-201ENST00000324659 XPO7Q9UIA9 1087 aaKnown RBP12.61□□□□□ -0.39
NLRC3-201ENST00000324659 ASB3Q9Y575 518 aa12.61□□□□□ -0.39
NLRC3-201ENST00000324659 EDN1P05305 212 aa12.6□□□□□ -0.39
NLRC3-201ENST00000324659 KRT19P08727 400 aa12.6□□□□□ -0.39
NLRC3-201ENST00000324659 RFC1P35251 1148 aaPredicted RBP12.6□□□□□ -0.39
NLRC3-201ENST00000324659 CCNFP41002 786 aa12.6□□□□□ -0.39
NLRC3-201ENST00000324659 CDKN2BP42772 138 aa12.6□□□□□ -0.39
NLRC3-201ENST00000324659 C1QBPQ07021 282 aaKnown RBP12.6□□□□□ -0.39
NLRC3-201ENST00000324659 EMC2Q15006 297 aa12.6□□□□□ -0.39
NLRC3-201ENST00000324659 ZRSR2Q15696 482 aaKnown RBP12.6□□□□□ -0.39
NLRC3-201ENST00000324659 CFAP157Q5JU67 520 aa12.6□□□□□ -0.39
NLRC3-201ENST00000324659 FAXCQ5TGI0 409 aa12.6□□□□□ -0.39
NLRC3-201ENST00000324659 TRIM72Q6ZMU5 477 aa12.6□□□□□ -0.39
NLRC3-201ENST00000324659 RFX6Q8HWS3 928 aa12.6□□□□□ -0.39
NLRC3-201ENST00000324659 UNC45BQ8IWX7 931 aa12.6□□□□□ -0.39
NLRC3-201ENST00000324659 CFAP36Q96G28 342 aa12.6□□□□□ -0.39
NLRC3-201ENST00000324659 WDR83Q9BRX9 315 aaKnown RBP12.6□□□□□ -0.39
NLRC3-201ENST00000324659 MECRQ9BV79 373 aa12.6□□□□□ -0.39
NLRC3-201ENST00000324659 MMADHCQ9H3L0 296 aaPredicted RBP12.6□□□□□ -0.39
NLRC3-201ENST00000324659 SYNCQ9H7C4 482 aa12.6□□□□□ -0.39
NLRC3-201ENST00000324659 CSADQ9Y600 493 aa12.6□□□□□ -0.39
NLRC3-201ENST00000324659 CCDC160A6NGH7 325 aa12.6□□□□□ -0.39
NLRC3-201ENST00000324659 C2CD2LO14523 706 aa12.6□□□□□ -0.39
NLRC3-201ENST00000324659 DDNO94850 711 aaPredicted RBP12.6□□□□□ -0.39
NLRC3-201ENST00000324659 ZWINTO95229 277 aa12.6□□□□□ -0.39
NLRC3-201ENST00000324659 PGK2P07205 417 aa12.6□□□□□ -0.39
NLRC3-201ENST00000324659 PSAPP07602 524 aa12.6□□□□□ -0.39
NLRC3-201ENST00000324659 RPL22P35268 128 aaKnown RBP12.6□□□□□ -0.39
NLRC3-201ENST00000324659 MYL6P60660 151 aa12.6□□□□□ -0.39
NLRC3-201ENST00000324659 SLC45A4Q5BKX6 768 aa12.6□□□□□ -0.39
NLRC3-201ENST00000324659 FOXB2Q5VYV0 432 aa12.6□□□□□ -0.39
NLRC3-201ENST00000324659 C4orf50Q6ZRC1 276 aa12.6□□□□□ -0.39
NLRC3-201ENST00000324659 RINLQ6ZS11 566 aa12.6□□□□□ -0.39
NLRC3-201ENST00000324659 IGDCC3Q8IVU1 814 aa12.6□□□□□ -0.39
NLRC3-201ENST00000324659 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.6□□□□□ -0.39
NLRC3-201ENST00000324659 MCPH1Q8NEM0 835 aa12.6□□□□□ -0.39
NLRC3-201ENST00000324659 JOSD2Q8TAC2 188 aa12.6□□□□□ -0.39
NLRC3-201ENST00000324659 TMEM174Q8WUU8 243 aa12.6□□□□□ -0.39
NLRC3-201ENST00000324659 WDR60Q8WVS4 1066 aa12.6□□□□□ -0.39
NLRC3-201ENST00000324659 SLC7A3Q8WY07 619 aa12.6□□□□□ -0.39
NLRC3-201ENST00000324659 CYTH2Q99418 400 aa12.6□□□□□ -0.39
NLRC3-201ENST00000324659 ELP3Q9H9T3 547 aa12.6□□□□□ -0.39
NLRC3-201ENST00000324659 PCDH9Q9HC56 1237 aa12.6□□□□□ -0.39
NLRC3-201ENST00000324659 DNAAF2Q9NVR5 837 aaKnown RBP12.6□□□□□ -0.39
NLRC3-201ENST00000324659 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.6□□□□□ -0.39
NLRC3-201ENST00000324659 SHOC2Q9UQ13 582 aa12.6□□□□□ -0.39
NLRC3-201ENST00000324659 LOXHD1Q8IVV2 1947 aa12.6□□□□□ -0.39
NLRC3-201ENST00000324659 FAM237BA0A1B0GVD1 139 aa12.6□□□□□ -0.39
NLRC3-201ENST00000324659 ATP6V1G1O75348 118 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms