RNA–Protein interactions for RNA: ENST00000324309.8

CCDC149-201, Transcript of coiled-coil domain containing 149, humanhuman

TSL 2

Gene CCDC149, Length 5,604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149-201ENST00000324309 NAT9Q9BTE0 207 aa13.33□□□□□ -0.28
CCDC149-201ENST00000324309 C1QTNF7Q9BXJ2 289 aa13.33□□□□□ -0.28
CCDC149-201ENST00000324309 AIPL1Q9NZN9 384 aa13.33□□□□□ -0.28
CCDC149-201ENST00000324309 PLA2G4CQ9UP65 541 aa13.33□□□□□ -0.28
CCDC149-201ENST00000324309 SQORQ9Y6N5 450 aa13.33□□□□□ -0.28
CCDC149-201ENST00000324309 COL18A1P39060 1754 aa13.33□□□□□ -0.28
CCDC149-201ENST00000324309 ABHD14A-ACY1A0A1B0GW23 586 aa13.33□□□□□ -0.28
CCDC149-201ENST00000324309 LRRIQ3A6PVS8 624 aaPredicted RBP13.33□□□□□ -0.28
CCDC149-201ENST00000324309 BUB1BO60566 1050 aaPredicted RBP13.33□□□□□ -0.28
CCDC149-201ENST00000324309 ASS1P00966 412 aaKnown RBP13.33□□□□□ -0.28
CCDC149-201ENST00000324309 EPHB2P29323 1055 aa13.33□□□□□ -0.28
CCDC149-201ENST00000324309 AIF1P55008 147 aa13.33□□□□□ -0.28
CCDC149-201ENST00000324309 IZUMO3Q5VZ72 239 aa13.33□□□□□ -0.28
CCDC149-201ENST00000324309 DOLKQ9UPQ8 538 aa13.33□□□□□ -0.28
CCDC149-201ENST00000324309 COPEO14579 308 aa13.32□□□□□ -0.28
CCDC149-201ENST00000324309 CTIFO43310 598 aaKnown RBP13.32□□□□□ -0.28
CCDC149-201ENST00000324309 CD52P31358 61 aa13.32□□□□□ -0.28
CCDC149-201ENST00000324309 CXCR5P32302 372 aa13.32□□□□□ -0.28
CCDC149-201ENST00000324309 NNTQ13423 1086 aa13.32□□□□□ -0.28
CCDC149-201ENST00000324309 TPX2Q9ULW0 747 aaKnown RBP13.32□□□□□ -0.28
CCDC149-201ENST00000324309 UBR2Q8IWV8 1755 aa13.32□□□□□ -0.28
CCDC149-201ENST00000324309 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.32□□□□□ -0.28
CCDC149-201ENST00000324309 MYO1DO94832 1006 aa13.32□□□□□ -0.28
CCDC149-201ENST00000324309 SCNN1GP51170 649 aa13.32□□□□□ -0.28
CCDC149-201ENST00000324309 ARSEP51690 589 aa13.32□□□□□ -0.28
CCDC149-201ENST00000324309 TBCCQ15814 346 aa13.32□□□□□ -0.28
CCDC149-201ENST00000324309 HIF1AQ16665 826 aa13.32□□□□□ -0.28
CCDC149-201ENST00000324309 TRMT10CQ7L0Y3 403 aaKnown RBP13.32□□□□□ -0.28
CCDC149-201ENST00000324309 C17orf53Q8N3J3 647 aaPredicted RBP13.32□□□□□ -0.28
CCDC149-201ENST00000324309 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.32□□□□□ -0.28
CCDC149-201ENST00000324309 FOXN3O00409 490 aaPredicted RBP13.32□□□□□ -0.28
CCDC149-201ENST00000324309 FGF10O15520 208 aaPredicted RBP13.32□□□□□ -0.28
CCDC149-201ENST00000324309 B4GALT4O60513 344 aa13.32□□□□□ -0.28
CCDC149-201ENST00000324309 ARL2P36404 184 aa13.32□□□□□ -0.28
CCDC149-201ENST00000324309 MLH1P40692 756 aa13.32□□□□□ -0.28
CCDC149-201ENST00000324309 ZNF131P52739 623 aa13.32□□□□□ -0.28
CCDC149-201ENST00000324309 FPGSQ05932 587 aa13.32□□□□□ -0.28
CCDC149-201ENST00000324309 BYSLQ13895 437 aaKnown RBP13.32□□□□□ -0.28
CCDC149-201ENST00000324309 CNGA2Q16280 664 aa13.32□□□□□ -0.28
CCDC149-201ENST00000324309 SLC28A3Q9HAS3 691 aa13.32□□□□□ -0.28
CCDC149-201ENST00000324309 SMYD2Q9NRG4 433 aa13.32□□□□□ -0.28
CCDC149-201ENST00000324309 TBC1D13Q9NVG8 400 aa13.32□□□□□ -0.28
CCDC149-201ENST00000324309 TMEM247A6NEH6 219 aa13.32□□□□□ -0.28
CCDC149-201ENST00000324309 SUN1O94901 812 aa13.32□□□□□ -0.28
CCDC149-201ENST00000324309 HIST1H2AGP0C0S8 130 aaPredicted RBP13.32□□□□□ -0.28
CCDC149-201ENST00000324309 HIST1H2ADP20671 130 aa13.32□□□□□ -0.28
CCDC149-201ENST00000324309 MAP4P27816 1152 aaKnown RBP13.32□□□□□ -0.28
CCDC149-201ENST00000324309 PABPC5Q96DU9 382 aaKnown RBP13.32□□□□□ -0.28
CCDC149-201ENST00000324309 HIST1H2AHQ96KK5 128 aa13.32□□□□□ -0.28
CCDC149-201ENST00000324309 HIST1H2AJQ99878 128 aa13.32□□□□□ -0.28
CCDC149-201ENST00000324309 H2AFJQ9BTM1 129 aa13.32□□□□□ -0.28
CCDC149-201ENST00000324309 DDX23Q9BUQ8 820 aaKnown RBP13.32□□□□□ -0.28
CCDC149-201ENST00000324309 ATXN3LQ9H3M9 355 aa13.32□□□□□ -0.28
CCDC149-201ENST00000324309 DRG1Q9Y295 367 aaKnown RBP13.32□□□□□ -0.28
CCDC149-201ENST00000324309 CLTBP09497 229 aa13.31□□□□□ -0.28
CCDC149-201ENST00000324309 PTPN1P18031 435 aaKnown RBP13.31□□□□□ -0.28
CCDC149-201ENST00000324309 CASP4P49662 377 aa13.31□□□□□ -0.28
CCDC149-201ENST00000324309 ACLYP53396 1101 aa13.31□□□□□ -0.28
CCDC149-201ENST00000324309 YWHAZP63104 245 aaKnown RBP13.31□□□□□ -0.28
CCDC149-201ENST00000324309 TRIP13Q15645 432 aaPredicted RBP13.31□□□□□ -0.28
CCDC149-201ENST00000324309 PSMD5Q16401 504 aa13.31□□□□□ -0.28
CCDC149-201ENST00000324309 TTLL9Q3SXZ7 439 aa13.31□□□□□ -0.28
CCDC149-201ENST00000324309 EARS2Q5JPH6 523 aaKnown RBP13.31□□□□□ -0.28
CCDC149-201ENST00000324309 CNKSR3Q6P9H4 555 aa13.31□□□□□ -0.28
CCDC149-201ENST00000324309 CACNA2D3Q8IZS8 1091 aa13.31□□□□□ -0.28
CCDC149-201ENST00000324309 EXD1Q8NHP7 514 aa13.31□□□□□ -0.28
CCDC149-201ENST00000324309 PDLIM2Q96JY6 352 aa13.31□□□□□ -0.28
CCDC149-201ENST00000324309 RNPEPQ9H4A4 650 aa13.31□□□□□ -0.28
CCDC149-201ENST00000324309 TSPAN16Q9UKR8 245 aa13.31□□□□□ -0.28
CCDC149-201ENST00000324309 BAG5Q9UL15 447 aa13.31□□□□□ -0.28
CCDC149-201ENST00000324309 NCKAP1Q9Y2A7 1128 aa13.31□□□□□ -0.28
CCDC149-201ENST00000324309 C2orf81A6NN90 581 aa13.31□□□□□ -0.28
CCDC149-201ENST00000324309 HACD1B0YJ81 288 aa13.31□□□□□ -0.28
CCDC149-201ENST00000324309 PROSCO94903 275 aa13.31□□□□□ -0.28
CCDC149-201ENST00000324309 NR2C2P49116 596 aa13.31□□□□□ -0.28
CCDC149-201ENST00000324309 VSTM1Q6UX27 236 aa13.31□□□□□ -0.28
CCDC149-201ENST00000324309 ADGRE3Q9BY15 652 aa13.31□□□□□ -0.28
CCDC149-201ENST00000324309 USH1CQ9Y6N9 552 aa13.31□□□□□ -0.28
CCDC149-201ENST00000324309 KIF3CO14782 793 aa13.31□□□□□ -0.28
CCDC149-201ENST00000324309 GYPCP04921 128 aa13.31□□□□□ -0.28
CCDC149-201ENST00000324309 GLI1P08151 1106 aa13.31□□□□□ -0.28
CCDC149-201ENST00000324309 GABPB1Q06547 395 aaPredicted RBP13.31□□□□□ -0.28
CCDC149-201ENST00000324309 EFEMP1Q12805 493 aa13.31□□□□□ -0.28
CCDC149-201ENST00000324309 TMEM175Q9BSA9 504 aa13.31□□□□□ -0.28
CCDC149-201ENST00000324309 DHX33Q9H6R0 707 aaKnown RBP13.31□□□□□ -0.28
CCDC149-201ENST00000324309 POPDC2Q9HBU9 364 aa13.31□□□□□ -0.28
CCDC149-201ENST00000324309 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.31□□□□□ -0.28
CCDC149-201ENST00000324309 GLUD1P00367 558 aa13.31□□□□□ -0.28
CCDC149-201ENST00000324309 CCL5P13501 91 aa13.31□□□□□ -0.28
CCDC149-201ENST00000324309 CHKAP35790 457 aa13.31□□□□□ -0.28
CCDC149-201ENST00000324309 NLRP9Q7RTR0 991 aa13.31□□□□□ -0.28
CCDC149-201ENST00000324309 DDI1Q8WTU0 396 aa13.31□□□□□ -0.28
CCDC149-201ENST00000324309 OSCP1Q8WVF1 389 aa13.31□□□□□ -0.28
CCDC149-201ENST00000324309 PIK3R5Q8WYR1 880 aa13.31□□□□□ -0.28
CCDC149-201ENST00000324309 VCX3BQ9H321 246 aa13.31□□□□□ -0.28
CCDC149-201ENST00000324309 EML4Q9HC35 981 aaKnown RBP13.31□□□□□ -0.28
CCDC149-201ENST00000324309 ATP5BP06576 529 aaKnown RBP13.31□□□□□ -0.28
CCDC149-201ENST00000324309 ZNF792Q3KQV3 632 aa13.31□□□□□ -0.28
CCDC149-201ENST00000324309 ANO5Q75V66 913 aa13.31□□□□□ -0.28
CCDC149-201ENST00000324309 SLC35C1Q96A29 364 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 185.4 ms