RNA–Protein interactions for RNA: ENST00000321027.7

GCFC2-201, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCFC2, Length 4,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-201ENST00000321027 DGKZQ13574 1117 aa16.02■□□□□ 0.16
GCFC2-201ENST00000321027 BMPR2Q13873 1038 aa16.02■□□□□ 0.16
GCFC2-201ENST00000321027 TRIP10Q15642 601 aa16.02■□□□□ 0.16
GCFC2-201ENST00000321027 EXOC3L1Q86VI1 746 aa16.02■□□□□ 0.16
GCFC2-201ENST00000321027 GIPC2Q8TF65 315 aa16.02■□□□□ 0.16
GCFC2-201ENST00000321027 A1CFQ9NQ94 594 aaKnown RBP16.02■□□□□ 0.16
GCFC2-201ENST00000321027 POLIQ9UNA4 740 aa16.02■□□□□ 0.16
GCFC2-201ENST00000321027 TRIM33Q9UPN9 1127 aa16.02■□□□□ 0.16
GCFC2-201ENST00000321027 C6orf222P0C671 652 aaPredicted RBP16.02■□□□□ 0.16
GCFC2-201ENST00000321027 RARBP10826 455 aa16.02■□□□□ 0.16
GCFC2-201ENST00000321027 PYGBP11216 843 aa16.02■□□□□ 0.16
GCFC2-201ENST00000321027 BGNP21810 368 aa16.02■□□□□ 0.16
GCFC2-201ENST00000321027 STIP1P31948 543 aaKnown RBP16.02■□□□□ 0.16
GCFC2-201ENST00000321027 VCPP55072 806 aaKnown RBP16.02■□□□□ 0.16
GCFC2-201ENST00000321027 FMO1Q01740 532 aa16.02■□□□□ 0.16
GCFC2-201ENST00000321027 HYIQ5T013 277 aa16.02■□□□□ 0.16
GCFC2-201ENST00000321027 ATXN2LQ8WWM7 1075 aaKnown RBP16.02■□□□□ 0.16
GCFC2-201ENST00000321027 YY1AP1Q9H869 796 aa16.02■□□□□ 0.16
GCFC2-201ENST00000321027 PRMT7Q9NVM4 692 aaPredicted RBP16.02■□□□□ 0.16
GCFC2-201ENST00000321027 PCYOX1Q9UHG3 505 aa16.02■□□□□ 0.16
GCFC2-201ENST00000321027 NPM3O75607 178 aaKnown RBP16.02■□□□□ 0.15
GCFC2-201ENST00000321027 ITGB5P18084 799 aa16.02■□□□□ 0.15
GCFC2-201ENST00000321027 PTPRAP18433 802 aa16.02■□□□□ 0.15
GCFC2-201ENST00000321027 ADAMTSL3P82987 1691 aa16.02■□□□□ 0.15
GCFC2-201ENST00000321027 DEUP1Q05D60 604 aa16.02■□□□□ 0.15
GCFC2-201ENST00000321027 TTC39BQ5VTQ0 682 aaPredicted RBP16.02■□□□□ 0.15
GCFC2-201ENST00000321027 ICA1LQ8NDH6 482 aa16.02■□□□□ 0.15
GCFC2-201ENST00000321027 IL31RAQ8NI17 732 aa16.02■□□□□ 0.15
GCFC2-201ENST00000321027 TCP10LQ8TDR4 215 aa16.02■□□□□ 0.15
GCFC2-201ENST00000321027 DNALI1O14645 258 aaPredicted RBP16.01■□□□□ 0.15
GCFC2-201ENST00000321027 AIM2O14862 343 aa16.01■□□□□ 0.15
GCFC2-201ENST00000321027 PPP1R12AO14974 1030 aaPredicted RBP16.01■□□□□ 0.15
GCFC2-201ENST00000321027 CACNB2Q08289 660 aaPredicted RBP16.01■□□□□ 0.15
GCFC2-201ENST00000321027 AMHR2Q16671 573 aa16.01■□□□□ 0.15
GCFC2-201ENST00000321027 FAM71AQ8IYT1 594 aa16.01■□□□□ 0.15
GCFC2-201ENST00000321027 ZBTB18Q99592 522 aa16.01■□□□□ 0.15
GCFC2-201ENST00000321027 SYNPO2Q9UMS6 1093 aa16.01■□□□□ 0.15
GCFC2-201ENST00000321027 COL14A1Q05707 1796 aaKnown RBP16.01■□□□□ 0.15
GCFC2-201ENST00000321027 TCRBV7S2A1N4TA0A589 114 aa16.01■□□□□ 0.15
GCFC2-201ENST00000321027 UBA6A0AVT1 1052 aaPredicted RBP16.01■□□□□ 0.15
GCFC2-201ENST00000321027 SHOX2O60902 331 aaPredicted RBP16.01■□□□□ 0.15
GCFC2-201ENST00000321027 NAMPTP43490 491 aa16.01■□□□□ 0.15
GCFC2-201ENST00000321027 ANO5Q75V66 913 aa16.01■□□□□ 0.15
GCFC2-201ENST00000321027 CGRRF1Q99675 332 aa16.01■□□□□ 0.15
GCFC2-201ENST00000321027 DONSONQ9NYP3 566 aa16.01■□□□□ 0.15
GCFC2-201ENST00000321027 ADM5C9JUS6 153 aa16.01■□□□□ 0.15
GCFC2-201ENST00000321027 SNX2O60749 519 aa16.01■□□□□ 0.15
GCFC2-201ENST00000321027 SPAG6O75602 509 aa16.01■□□□□ 0.15
GCFC2-201ENST00000321027 CETPP11597 493 aa16.01■□□□□ 0.15
GCFC2-201ENST00000321027 ENO3P13929 434 aaPredicted RBP16.01■□□□□ 0.15
GCFC2-201ENST00000321027 EPHB2P29323 1055 aa16.01■□□□□ 0.15
GCFC2-201ENST00000321027 MCL1Q07820 350 aa16.01■□□□□ 0.15
GCFC2-201ENST00000321027 DNAL1Q4LDG9 190 aa16.01■□□□□ 0.15
GCFC2-201ENST00000321027 FRA10AC1Q70Z53 315 aa16.01■□□□□ 0.15
GCFC2-201ENST00000321027 ULK4Q96C45 1275 aa16.01■□□□□ 0.15
GCFC2-201ENST00000321027 IFT43Q96FT9 208 aa16.01■□□□□ 0.15
GCFC2-201ENST00000321027 NAF1Q96HR8 494 aaKnown RBP16.01■□□□□ 0.15
GCFC2-201ENST00000321027 PARK7Q99497 189 aaKnown RBP16.01■□□□□ 0.15
GCFC2-201ENST00000321027 CCDC90BQ9GZT6 254 aa16.01■□□□□ 0.15
GCFC2-201ENST00000321027 YDJCA8MPS7 323 aa16.01■□□□□ 0.15
GCFC2-201ENST00000321027 ADRA1DP25100 572 aa16.01■□□□□ 0.15
GCFC2-201ENST00000321027 HUNKP57058 714 aa16.01■□□□□ 0.15
GCFC2-201ENST00000321027 CAPRIN1Q14444 709 aaKnown RBP16.01■□□□□ 0.15
GCFC2-201ENST00000321027 TTC39CQ8N584 583 aa16.01■□□□□ 0.15
GCFC2-201ENST00000321027 LRRC57Q8N9N7 239 aa16.01■□□□□ 0.15
GCFC2-201ENST00000321027 SHC3Q92529 594 aa16.01■□□□□ 0.15
GCFC2-201ENST00000321027 P2RX7Q99572 595 aaKnown RBP16.01■□□□□ 0.15
GCFC2-201ENST00000321027 FAM53CQ9NYF3 392 aa16.01■□□□□ 0.15
GCFC2-201ENST00000321027 NCANO14594 1321 aa16■□□□□ 0.15
GCFC2-201ENST00000321027 CTSHP09668 335 aa16■□□□□ 0.15
GCFC2-201ENST00000321027 NUDT17P0C025 328 aa16■□□□□ 0.15
GCFC2-201ENST00000321027 MED21Q13503 144 aa16■□□□□ 0.15
GCFC2-201ENST00000321027 LAMC2Q13753 1193 aa16■□□□□ 0.15
GCFC2-201ENST00000321027 EFTUD2Q15029 972 aaKnown RBP eCLIP16■□□□□ 0.151e-11■■□□□ 12.9
GCFC2-201ENST00000321027 USP33Q8TEY7 942 aa16■□□□□ 0.15
GCFC2-201ENST00000321027 HACD3Q9P035 362 aa16■□□□□ 0.15
GCFC2-201ENST00000321027 MAPTP10636 758 aaKnown RBP16■□□□□ 0.15
GCFC2-201ENST00000321027 VHLP40337 213 aa16■□□□□ 0.15
GCFC2-201ENST00000321027 SERPINB4P48594 390 aa16■□□□□ 0.15
GCFC2-201ENST00000321027 DRG2P55039 364 aaKnown RBP16■□□□□ 0.15
GCFC2-201ENST00000321027 C1QBPQ07021 282 aaKnown RBP16■□□□□ 0.15
GCFC2-201ENST00000321027 MAP4K3Q8IVH8 894 aa16■□□□□ 0.15
GCFC2-201ENST00000321027 AGAP11Q8TF27 550 aa16■□□□□ 0.15
GCFC2-201ENST00000321027 VAV3Q9UKW4 847 aa16■□□□□ 0.15
GCFC2-201ENST00000321027 FOXO6A8MYZ6 492 aa16■□□□□ 0.15
GCFC2-201ENST00000321027 TCN1P20061 433 aaPredicted RBP16■□□□□ 0.15
GCFC2-201ENST00000321027 ELK3P41970 407 aa16■□□□□ 0.15
GCFC2-201ENST00000321027 ZNF157P51786 506 aaPredicted RBP16■□□□□ 0.15
GCFC2-201ENST00000321027 CDH8P55286 799 aa16■□□□□ 0.15
GCFC2-201ENST00000321027 TSPY1Q01534 308 aa16■□□□□ 0.15
GCFC2-201ENST00000321027 CRYMQ14894 314 aa16■□□□□ 0.15
GCFC2-201ENST00000321027 BMT2Q1RMZ1 405 aa16■□□□□ 0.15
GCFC2-201ENST00000321027 DCAF6Q58WW2 860 aa16■□□□□ 0.15
GCFC2-201ENST00000321027 FOXR2Q6PJQ5 311 aa16■□□□□ 0.15
GCFC2-201ENST00000321027 SLC30A9Q6PML9 568 aa16■□□□□ 0.15
GCFC2-201ENST00000321027 NIPA1Q7RTP0 329 aa16■□□□□ 0.15
GCFC2-201ENST00000321027 THEM5Q8N1Q8 247 aa16■□□□□ 0.15
GCFC2-201ENST00000321027 LRRC15Q8TF66 581 aa16■□□□□ 0.15
GCFC2-201ENST00000321027 PCDHB18PQ96TA0 734 aa16■□□□□ 0.15
GCFC2-201ENST00000321027 SLCO1B3Q9NPD5 702 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms