RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 NR2E3Q9Y5X4 410 aa15.49■□□□□ 0.07
CLK4-201ENST00000316308 A0A1B0GUA9 196 aa15.49■□□□□ 0.07
CLK4-201ENST00000316308 H0YHG0 523 aa15.49■□□□□ 0.07
CLK4-201ENST00000316308 AVILO75366 819 aa15.49■□□□□ 0.07
CLK4-201ENST00000316308 TRUB2O95900 331 aaKnown RBP15.49■□□□□ 0.07
CLK4-201ENST00000316308 ITGAVP06756 1048 aa15.49■□□□□ 0.07
CLK4-201ENST00000316308 AKAP5P24588 427 aa15.49■□□□□ 0.07
CLK4-201ENST00000316308 HNRNPH1P31943 449 aaKnown RBP15.49■□□□□ 0.07
CLK4-201ENST00000316308 SCTRP47872 440 aa15.49■□□□□ 0.07
CLK4-201ENST00000316308 DRICH1Q6PGQ1 229 aaPredicted RBP15.49■□□□□ 0.07
CLK4-201ENST00000316308 MICALCLQ6ZW33 695 aa15.49■□□□□ 0.07
CLK4-201ENST00000316308 NETO2Q8NC67 525 aa15.49■□□□□ 0.07
CLK4-201ENST00000316308 CCDC197Q8NCU1 140 aa15.49■□□□□ 0.07
CLK4-201ENST00000316308 PAIP2Q9BPZ3 127 aaKnown RBP15.49■□□□□ 0.07
CLK4-201ENST00000316308 ADPGKQ9BRR6 497 aa15.49■□□□□ 0.07
CLK4-201ENST00000316308 NFKBIZQ9BYH8 718 aa15.49■□□□□ 0.07
CLK4-201ENST00000316308 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.49■□□□□ 0.07
CLK4-201ENST00000316308 HAUS2Q9NVX0 235 aa15.49■□□□□ 0.07
CLK4-201ENST00000316308 STRIP2Q9ULQ0 834 aa15.49■□□□□ 0.07
CLK4-201ENST00000316308 FARP1Q9Y4F1 1045 aaPredicted RBP15.49■□□□□ 0.07
CLK4-201ENST00000316308 SNX9Q9Y5X1 595 aa15.49■□□□□ 0.07
CLK4-201ENST00000316308 CETN2P41208 172 aa15.48■□□□□ 0.07
CLK4-201ENST00000316308 FAM187BQ17R55 369 aa15.48■□□□□ 0.07
CLK4-201ENST00000316308 FAM133BQ5BKY9 247 aaKnown RBP15.48■□□□□ 0.07
CLK4-201ENST00000316308 NPLOC4Q8TAT6 608 aa15.48■□□□□ 0.07
CLK4-201ENST00000316308 ACAP3Q96P50 834 aa15.48■□□□□ 0.07
CLK4-201ENST00000316308 OSMRQ99650 979 aa15.48■□□□□ 0.07
CLK4-201ENST00000316308 DRG1Q9Y295 367 aaKnown RBP15.48■□□□□ 0.07
CLK4-201ENST00000316308 TRIP12Q14669 1992 aaPredicted RBP15.48■□□□□ 0.07
CLK4-201ENST00000316308 ATXN2Q99700 1313 aaKnown RBP15.48■□□□□ 0.07
CLK4-201ENST00000316308 CDH16O75309 829 aa15.48■□□□□ 0.07
CLK4-201ENST00000316308 FGFR1P11362 822 aa15.48■□□□□ 0.07
CLK4-201ENST00000316308 ZNF200P98182 395 aaPredicted RBP15.48■□□□□ 0.07
CLK4-201ENST00000316308 C1orf228Q6PIY5 440 aa15.48■□□□□ 0.07
CLK4-201ENST00000316308 FAM47EQ6ZV65 393 aa15.48■□□□□ 0.07
CLK4-201ENST00000316308 TMEM40Q8WWA1 233 aa15.48■□□□□ 0.07
CLK4-201ENST00000316308 KLF6Q99612 283 aaPredicted RBP15.48■□□□□ 0.07
CLK4-201ENST00000316308 PTPN18Q99952 460 aa15.48■□□□□ 0.07
CLK4-201ENST00000316308 NXF3Q9H4D5 531 aaKnown RBP15.48■□□□□ 0.07
CLK4-201ENST00000316308 GOLGA2P5Q9HBQ8 144 aa15.48■□□□□ 0.07
CLK4-201ENST00000316308 DDX56Q9NY93 547 aaKnown RBP15.48■□□□□ 0.07
CLK4-201ENST00000316308 KLK14Q9P0G3 267 aa15.48■□□□□ 0.07
CLK4-201ENST00000316308 PLXNB2O15031 1838 aa15.48■□□□□ 0.07
CLK4-201ENST00000316308 CCL15-CCL14A0A0B4J2E2 113 aa15.47■□□□□ 0.07
CLK4-201ENST00000316308 MED7O43513 233 aa15.47■□□□□ 0.07
CLK4-201ENST00000316308 PDGFRAP16234 1089 aa15.47■□□□□ 0.07
CLK4-201ENST00000316308 CDH6P55285 790 aa15.47■□□□□ 0.07
CLK4-201ENST00000316308 CCL15Q16663 113 aa15.47■□□□□ 0.07
CLK4-201ENST00000316308 GOLGA7BQ2TAP0 167 aa15.47■□□□□ 0.07
CLK4-201ENST00000316308 FAXCQ5TGI0 409 aa15.47■□□□□ 0.07
CLK4-201ENST00000316308 SCYL2Q6P3W7 929 aa15.47■□□□□ 0.07
CLK4-201ENST00000316308 BBS12Q6ZW61 710 aa15.47■□□□□ 0.07
CLK4-201ENST00000316308 ARMC9Q7Z3E5 817 aa15.47■□□□□ 0.07
CLK4-201ENST00000316308 POLNQ7Z5Q5 900 aa15.47■□□□□ 0.07
CLK4-201ENST00000316308 RELL1Q8IUW5 271 aa15.47■□□□□ 0.07
CLK4-201ENST00000316308 AGGF1Q8N302 714 aaeCLIP15.47■□□□□ 0.07
CLK4-201ENST00000316308 KHSRPQ92945 711 aaKnown RBP eCLIP15.47■□□□□ 0.073e-6■■■□□ 16.4
CLK4-201ENST00000316308 MIS12Q9H081 205 aa15.47■□□□□ 0.07
CLK4-201ENST00000316308 CCDC134Q9H6E4 229 aa15.47■□□□□ 0.07
CLK4-201ENST00000316308 CACNG4Q9UBN1 327 aa15.47■□□□□ 0.07
CLK4-201ENST00000316308 LGALS13Q9UHV8 139 aa15.47■□□□□ 0.07
CLK4-201ENST00000316308 BARX2Q9UMQ3 279 aaPredicted RBP15.47■□□□□ 0.07
CLK4-201ENST00000316308 C2CD4BA6NLJ0 364 aa15.47■□□□□ 0.07
CLK4-201ENST00000316308 SNX3O60493 162 aa15.47■□□□□ 0.07
CLK4-201ENST00000316308 TCEA3O75764 348 aa15.47■□□□□ 0.07
CLK4-201ENST00000316308 MMP3P08254 477 aa15.47■□□□□ 0.07
CLK4-201ENST00000316308 IL4RP24394 825 aa15.47■□□□□ 0.07
CLK4-201ENST00000316308 PTPN7P35236 360 aa15.47■□□□□ 0.07
CLK4-201ENST00000316308 COPS2P61201 443 aa15.47■□□□□ 0.07
CLK4-201ENST00000316308 ZNF268Q14587 947 aaPredicted RBP15.47■□□□□ 0.07
CLK4-201ENST00000316308 USP50Q70EL3 339 aaPredicted RBP15.47■□□□□ 0.07
CLK4-201ENST00000316308 GPR142Q7Z601 462 aa15.47■□□□□ 0.07
CLK4-201ENST00000316308 DPP9Q86TI2 863 aa15.47■□□□□ 0.07
CLK4-201ENST00000316308 SPATS2Q86XZ4 545 aaKnown RBP15.47■□□□□ 0.07
CLK4-201ENST00000316308 EXOC8Q8IYI6 725 aa15.47■□□□□ 0.07
CLK4-201ENST00000316308 CMASQ8NFW8 434 aaPredicted RBP15.47■□□□□ 0.07
CLK4-201ENST00000316308 SPATA18Q8TC71 538 aa15.47■□□□□ 0.07
CLK4-201ENST00000316308 UPF1Q92900 1129 aaKnown RBP eCLIP15.47■□□□□ 0.07
CLK4-201ENST00000316308 TRIM56Q9BRZ2 755 aaKnown RBP15.47■□□□□ 0.07
CLK4-201ENST00000316308 MAK16Q9BXY0 300 aaKnown RBP15.47■□□□□ 0.07
CLK4-201ENST00000316308 RNF39Q9H2S5 420 aa15.47■□□□□ 0.07
CLK4-201ENST00000316308 PCDH9Q9HC56 1237 aa15.47■□□□□ 0.07
CLK4-201ENST00000316308 SPON1Q9HCB6 807 aa15.47■□□□□ 0.07
CLK4-201ENST00000316308 UBN1Q9NPG3 1134 aa15.47■□□□□ 0.07
CLK4-201ENST00000316308 CCT8L1PA6NM43 557 aa15.46■□□□□ 0.07
CLK4-201ENST00000316308 RBP3P10745 1247 aa15.46■□□□□ 0.07
CLK4-201ENST00000316308 LMO2P25791 158 aa15.46■□□□□ 0.07
CLK4-201ENST00000316308 GABRB2P47870 512 aa15.46■□□□□ 0.07
CLK4-201ENST00000316308 EIF3EP60228 445 aaKnown RBP15.46■□□□□ 0.07
CLK4-201ENST00000316308 TAP1Q03518 808 aa15.46■□□□□ 0.07
CLK4-201ENST00000316308 MGAT5Q09328 741 aa15.46■□□□□ 0.07
CLK4-201ENST00000316308 TAZQ16635 292 aa15.46■□□□□ 0.07
CLK4-201ENST00000316308 CCDC14Q49A88 953 aa15.46■□□□□ 0.07
CLK4-201ENST00000316308 TRABD2AQ86V40 505 aa15.46■□□□□ 0.07
CLK4-201ENST00000316308 CNPY4Q8N129 248 aa15.46■□□□□ 0.07
CLK4-201ENST00000316308 NAT8LQ8N9F0 302 aa15.46■□□□□ 0.07
CLK4-201ENST00000316308 NDRG1Q92597 394 aaKnown RBP15.46■□□□□ 0.07
CLK4-201ENST00000316308 ASB7Q9H672 318 aa15.46■□□□□ 0.07
CLK4-201ENST00000316308 SLCO1B3Q9NPD5 702 aa15.46■□□□□ 0.07
CLK4-201ENST00000316308 GGA2Q9UJY4 613 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms