RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 RPGRIP1Q96KN7 1286 aa8.35□□□□□ -1.07
CDC42-201ENST00000315554 PCMTD1Q96MG8 357 aaPredicted RBP8.35□□□□□ -1.07
CDC42-201ENST00000315554 RIPOR3Q96MK2 946 aa8.35□□□□□ -1.07
CDC42-201ENST00000315554 ZNF334Q9HCZ1 680 aaPredicted RBP8.35□□□□□ -1.07
CDC42-201ENST00000315554 ACP6Q9NPH0 428 aa8.35□□□□□ -1.07
CDC42-201ENST00000315554 KRT82Q9NSB4 513 aa8.35□□□□□ -1.07
CDC42-201ENST00000315554 FAM207AQ9NSI2 230 aaPredicted RBP8.35□□□□□ -1.07
CDC42-201ENST00000315554 APEX2Q9UBZ4 518 aa8.35□□□□□ -1.07
CDC42-201ENST00000315554 DNAJC12Q9UKB3 198 aa8.35□□□□□ -1.07
CDC42-201ENST00000315554 MAGED2Q9UNF1 606 aaPredicted RBP8.35□□□□□ -1.07
CDC42-201ENST00000315554 FHOD1Q9Y613 1164 aa8.35□□□□□ -1.07
CDC42-201ENST00000315554 CLUHO75153 1309 aa8.34□□□□□ -1.07
CDC42-201ENST00000315554 FAM170AA1A519 330 aa8.34□□□□□ -1.07
CDC42-201ENST00000315554 GTPBP10A4D1E9 387 aaKnown RBP8.34□□□□□ -1.07
CDC42-201ENST00000315554 AP1G2O75843 785 aa8.34□□□□□ -1.07
CDC42-201ENST00000315554 BEST1O76090 585 aa8.34□□□□□ -1.07
CDC42-201ENST00000315554 SERPINC1P01008 464 aa8.34□□□□□ -1.07
CDC42-201ENST00000315554 HOXA9P31269 272 aa8.34□□□□□ -1.07
CDC42-201ENST00000315554 CCR2P41597 374 aa8.34□□□□□ -1.07
CDC42-201ENST00000315554 TUFMP49411 452 aaKnown RBP8.34□□□□□ -1.07
CDC42-201ENST00000315554 MAP3K7CLP57077 242 aa8.34□□□□□ -1.07
CDC42-201ENST00000315554 YWHAEP62258 255 aaKnown RBP8.34□□□□□ -1.07
CDC42-201ENST00000315554 TPM4P67936 248 aa8.34□□□□□ -1.07
CDC42-201ENST00000315554 FANCCQ00597 558 aa8.34□□□□□ -1.07
CDC42-201ENST00000315554 GCNT1Q02742 428 aa8.34□□□□□ -1.07
CDC42-201ENST00000315554 SMARCB1Q12824 385 aa8.34□□□□□ -1.07
CDC42-201ENST00000315554 MAPRE1Q15691 268 aaKnown RBP8.34□□□□□ -1.07
CDC42-201ENST00000315554 TAF12Q16514 161 aa8.34□□□□□ -1.07
CDC42-201ENST00000315554 CFAP221Q4G0U5 840 aa8.34□□□□□ -1.07
CDC42-201ENST00000315554 PABPC1LQ4VXU2 614 aaKnown RBP8.34□□□□□ -1.07
CDC42-201ENST00000315554 PPP1R26Q5T8A7 1209 aaPredicted RBP8.34□□□□□ -1.07
CDC42-201ENST00000315554 KLHDC7AQ5VTJ3 777 aa8.34□□□□□ -1.07
CDC42-201ENST00000315554 DNAJB7Q7Z6W7 309 aaPredicted RBP8.34□□□□□ -1.07
CDC42-201ENST00000315554 CRYBG2Q8N1P7 616 aa8.34□□□□□ -1.07
CDC42-201ENST00000315554 ELMOD1Q8N336 334 aa8.34□□□□□ -1.07
CDC42-201ENST00000315554 TFAP2BQ92481 460 aa8.34□□□□□ -1.07
CDC42-201ENST00000315554 CYFIP2Q96F07 1278 aa8.34□□□□□ -1.07
CDC42-201ENST00000315554 ZNF512Q96ME7 567 aaPredicted RBP8.34□□□□□ -1.07
CDC42-201ENST00000315554 KCNK16Q96T55 309 aa8.34□□□□□ -1.07
CDC42-201ENST00000315554 IL21Q9HBE4 155 aa8.34□□□□□ -1.07
CDC42-201ENST00000315554 MAFFQ9ULX9 164 aa8.34□□□□□ -1.07
CDC42-201ENST00000315554 C2orf16Q68DN1 1984 aa8.34□□□□□ -1.07
CDC42-201ENST00000315554 MTCL1Q9Y4B5 1905 aaKnown RBP8.34□□□□□ -1.07
CDC42-201ENST00000315554 SLC38A8A6NNN8 435 aa8.33□□□□□ -1.08
CDC42-201ENST00000315554 C2CD4DB7Z1M9 353 aa8.33□□□□□ -1.08
CDC42-201ENST00000315554 NOL4O94818 638 aa8.33□□□□□ -1.08
CDC42-201ENST00000315554 CEBPBP17676 345 aa8.33□□□□□ -1.08
CDC42-201ENST00000315554 PTPN2P17706 415 aa8.33□□□□□ -1.08
CDC42-201ENST00000315554 FSHRP23945 695 aa8.33□□□□□ -1.08
CDC42-201ENST00000315554 ANXA13P27216 316 aa8.33□□□□□ -1.08
CDC42-201ENST00000315554 GBP2P32456 591 aaPredicted RBP8.33□□□□□ -1.08
CDC42-201ENST00000315554 MAGEA11P43364 429 aa8.33□□□□□ -1.08
CDC42-201ENST00000315554 MFAP3P55082 362 aa8.33□□□□□ -1.08
CDC42-201ENST00000315554 ZNF445P59923 1031 aa8.33□□□□□ -1.08
CDC42-201ENST00000315554 POLR2FP61218 127 aaKnown RBP8.33□□□□□ -1.08
CDC42-201ENST00000315554 USP46P62068 366 aa8.33□□□□□ -1.08
CDC42-201ENST00000315554 RPL10AP62906 217 aaKnown RBP8.33□□□□□ -1.08
CDC42-201ENST00000315554 CYP4F8P98187 520 aa8.33□□□□□ -1.08
CDC42-201ENST00000315554 VEPH1Q14D04 833 aa8.33□□□□□ -1.08
CDC42-201ENST00000315554 GOLGA7BQ2TAP0 167 aa8.33□□□□□ -1.08
CDC42-201ENST00000315554 PUS10Q3MIT2 529 aaKnown RBP8.33□□□□□ -1.08
CDC42-201ENST00000315554 PDZD4Q76G19 769 aaPredicted RBP8.33□□□□□ -1.08
CDC42-201ENST00000315554 ZMIZ2Q8NF64 920 aa8.33□□□□□ -1.08
CDC42-201ENST00000315554 UBA3Q8TBC4 463 aa8.33□□□□□ -1.08
CDC42-201ENST00000315554 ADAMTS19Q8TE59 1207 aa8.33□□□□□ -1.08
CDC42-201ENST00000315554 MCRS1Q96EZ8 462 aa8.33□□□□□ -1.08
CDC42-201ENST00000315554 FUBP3Q96I24 572 aaKnown RBP eCLIP8.33□□□□□ -1.08
CDC42-201ENST00000315554 FAXDC2Q96IV6 333 aa8.33□□□□□ -1.08
CDC42-201ENST00000315554 MYADMQ96S97 322 aa8.33□□□□□ -1.08
CDC42-201ENST00000315554 HNRNPABQ99729 332 aaKnown RBP8.33□□□□□ -1.08
CDC42-201ENST00000315554 SMOQ99835 787 aa8.33□□□□□ -1.08
CDC42-201ENST00000315554 ZSWIM1Q9BR11 485 aa8.33□□□□□ -1.08
CDC42-201ENST00000315554 PHF7Q9BWX1 381 aaPredicted RBP8.33□□□□□ -1.08
CDC42-201ENST00000315554 GANQ9H2C0 597 aa8.33□□□□□ -1.08
CDC42-201ENST00000315554 WDR6Q9NNW5 1121 aaKnown RBP8.33□□□□□ -1.08
CDC42-201ENST00000315554 ABCB6Q9NP58 842 aa8.33□□□□□ -1.08
CDC42-201ENST00000315554 NLRC4Q9NPP4 1024 aa8.33□□□□□ -1.08
CDC42-201ENST00000315554 ASAH2Q9NR71 780 aa8.33□□□□□ -1.08
CDC42-201ENST00000315554 FAM50BQ9Y247 325 aa8.33□□□□□ -1.08
CDC42-201ENST00000315554 SIK3Q9Y2K2 1263 aa8.33□□□□□ -1.08
CDC42-201ENST00000315554 MRPS23Q9Y3D9 190 aaKnown RBP8.33□□□□□ -1.08
CDC42-201ENST00000315554 TCF20Q9UGU0 1960 aaKnown RBP8.33□□□□□ -1.08
CDC42-201ENST00000315554 DOCK6Q96HP0 2047 aa8.33□□□□□ -1.08
CDC42-201ENST00000315554 ATP8B3O60423 1300 aa8.33□□□□□ -1.08
CDC42-201ENST00000315554 A0A1W2PRU2 124 aa8.32□□□□□ -1.08
CDC42-201ENST00000315554 LRRC10BA6NIK2 292 aa8.32□□□□□ -1.08
CDC42-201ENST00000315554 TULP2O00295 520 aa8.32□□□□□ -1.08
CDC42-201ENST00000315554 FOXN3O00409 490 aaPredicted RBP8.32□□□□□ -1.08
CDC42-201ENST00000315554 TRIM66O15016 1216 aa8.32□□□□□ -1.08
CDC42-201ENST00000315554 CYP26A1O43174 497 aa8.32□□□□□ -1.08
CDC42-201ENST00000315554 MOSPD3O75425 235 aa8.32□□□□□ -1.08
CDC42-201ENST00000315554 CAVIN2O95810 425 aa8.32□□□□□ -1.08
CDC42-201ENST00000315554 CFHP08603 1231 aa8.32□□□□□ -1.08
CDC42-201ENST00000315554 FAM200BP0CF97 657 aa8.32□□□□□ -1.08
CDC42-201ENST00000315554 UCHL3P15374 230 aa8.32□□□□□ -1.08
CDC42-201ENST00000315554 HMGA1P17096 107 aaKnown RBP8.32□□□□□ -1.08
CDC42-201ENST00000315554 GABRR2P28476 465 aa8.32□□□□□ -1.08
CDC42-201ENST00000315554 ZNF132P52740 706 aa8.32□□□□□ -1.08
CDC42-201ENST00000315554 ZP2Q05996 745 aa8.32□□□□□ -1.08
CDC42-201ENST00000315554 DRAP1Q14919 205 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms