RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 AGLP35573 1532 aa9.69□□□□□ -0.86
BDNF-201ENST00000314915 USP42Q9H9J4 1324 aaKnown RBP9.69□□□□□ -0.86
BDNF-201ENST00000314915 C8BP07358 591 aa9.69□□□□□ -0.86
BDNF-201ENST00000314915 ICAM2P13598 275 aa9.69□□□□□ -0.86
BDNF-201ENST00000314915 DNAJB2P25686 324 aa9.69□□□□□ -0.86
BDNF-201ENST00000314915 MAGEA1P43355 309 aa9.69□□□□□ -0.86
BDNF-201ENST00000314915 YWHAGP61981 247 aaKnown RBP eCLIP9.69□□□□□ -0.86
BDNF-201ENST00000314915 GSTO1P78417 241 aa9.69□□□□□ -0.86
BDNF-201ENST00000314915 CSTF3Q12996 717 aaKnown RBP9.69□□□□□ -0.86
BDNF-201ENST00000314915 MOGSQ13724 837 aa9.69□□□□□ -0.86
BDNF-201ENST00000314915 SPARCL1Q14515 664 aa9.69□□□□□ -0.86
BDNF-201ENST00000314915 USPL1Q5W0Q7 1092 aa9.69□□□□□ -0.86
BDNF-201ENST00000314915 TATDN1Q6P1N9 297 aa9.69□□□□□ -0.86
BDNF-201ENST00000314915 C15orf52Q6ZUT6 534 aaKnown RBP9.69□□□□□ -0.86
BDNF-201ENST00000314915 CLNKQ7Z7G1 428 aa9.69□□□□□ -0.86
BDNF-201ENST00000314915 KCTD4Q8WVF5 259 aa9.69□□□□□ -0.86
BDNF-201ENST00000314915 GAL3ST1Q99999 423 aa9.69□□□□□ -0.86
BDNF-201ENST00000314915 NUDT12Q9BQG2 462 aa9.69□□□□□ -0.86
BDNF-201ENST00000314915 WACQ9BTA9 647 aa9.69□□□□□ -0.86
BDNF-201ENST00000314915 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.69□□□□□ -0.86
BDNF-201ENST00000314915 FBXO40Q9UH90 709 aa9.69□□□□□ -0.86
BDNF-201ENST00000314915 KCNJ18B7U540 433 aa9.69□□□□□ -0.86
BDNF-201ENST00000314915 ASS1P00966 412 aaKnown RBP9.69□□□□□ -0.86
BDNF-201ENST00000314915 IFNA16P05015 189 aa9.69□□□□□ -0.86
BDNF-201ENST00000314915 ALDH3B2P48448 385 aa9.69□□□□□ -0.86
BDNF-201ENST00000314915 NKX2-5P52952 324 aaPredicted RBP9.69□□□□□ -0.86
BDNF-201ENST00000314915 AUHQ13825 339 aaKnown RBP9.69□□□□□ -0.86
BDNF-201ENST00000314915 KCNJ12Q14500 433 aa9.69□□□□□ -0.86
BDNF-201ENST00000314915 TOMM20Q15388 145 aa9.69□□□□□ -0.86
BDNF-201ENST00000314915 SLC9C1Q4G0N8 1177 aa9.69□□□□□ -0.86
BDNF-201ENST00000314915 AARS2Q5JTZ9 985 aaKnown RBP9.69□□□□□ -0.86
BDNF-201ENST00000314915 CDH26Q8IXH8 852 aa9.69□□□□□ -0.86
BDNF-201ENST00000314915 TBC1D15Q8TC07 691 aa9.69□□□□□ -0.86
BDNF-201ENST00000314915 SLC9A6Q92581 669 aa9.69□□□□□ -0.86
BDNF-201ENST00000314915 SNX18Q96RF0 628 aa9.69□□□□□ -0.86
BDNF-201ENST00000314915 C17orf62Q9BQA9 187 aa9.69□□□□□ -0.86
BDNF-201ENST00000314915 LBHD1Q9BQE6 289 aaPredicted RBP9.69□□□□□ -0.86
BDNF-201ENST00000314915 NOC4LQ9BVI4 516 aaKnown RBP9.69□□□□□ -0.86
BDNF-201ENST00000314915 TARS2Q9BW92 718 aaKnown RBP9.69□□□□□ -0.86
BDNF-201ENST00000314915 C17orf75Q9HAS0 396 aa9.69□□□□□ -0.86
BDNF-201ENST00000314915 TXNDC16Q9P2K2 825 aa9.69□□□□□ -0.86
BDNF-201ENST00000314915 POLG2Q9UHN1 485 aa9.69□□□□□ -0.86
BDNF-201ENST00000314915 NEU2Q9Y3R4 380 aa9.69□□□□□ -0.86
BDNF-201ENST00000314915 AP4S1Q9Y587 144 aa9.69□□□□□ -0.86
BDNF-201ENST00000314915 KIAA0556O60303 1618 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 MYO3BQ8WXR4 1341 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 SH2B2O14492 632 aaPredicted RBP9.68□□□□□ -0.86
BDNF-201ENST00000314915 PI15O43692 258 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 CTDNEP1O95476 244 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 TAC1P20366 129 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 DNM2P50570 870 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 RPP38P78345 283 aaKnown RBP9.68□□□□□ -0.86
BDNF-201ENST00000314915 BTN2A1Q7KYR7 527 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 G2E3Q7L622 706 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 PSD4Q8NDX1 1056 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 GDPD5Q8WTR4 605 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 MTBPQ96DY7 904 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 RANBP9Q96S59 729 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 C1orf50Q9BV19 199 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 EMILIN2Q9BXX0 1053 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 PLEKHA5Q9HAU0 1116 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 FAM8A1Q9UBU6 413 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 SIK3Q9Y2K2 1263 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 ADAM11O75078 769 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 KRT8P05787 483 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 C6orf222P0C671 652 aaPredicted RBP9.68□□□□□ -0.86
BDNF-201ENST00000314915 AMPD1P23109 780 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 NAMPTP43490 491 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 ADCY7P51828 1080 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 AP3B2Q13367 1082 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 CLUL1Q15846 466 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 BRDTQ58F21 947 aaPredicted RBP9.68□□□□□ -0.86
BDNF-201ENST00000314915 PLEKHA7Q6IQ23 1121 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 SRRM1Q8IYB3 904 aaKnown RBP9.68□□□□□ -0.86
BDNF-201ENST00000314915 CLYBLQ8N0X4 340 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 PSPC1Q8WXF1 523 aaKnown RBP9.68□□□□□ -0.86
BDNF-201ENST00000314915 ZSCAN5AQ9BUG6 496 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 PAQR5Q9NXK6 330 aaPredicted RBP9.68□□□□□ -0.86
BDNF-201ENST00000314915 PHTF1Q9UMS5 762 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 ANGEL1Q9UNK9 670 aaKnown RBP9.68□□□□□ -0.86
BDNF-201ENST00000314915 ZNF175Q9Y473 711 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 USP32Q8NFA0 1604 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 WDR91A4D1P6 747 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 LGALS16A8MUM7 142 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 E2F3O00716 465 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 MAFO75444 373 aaPredicted RBP9.68□□□□□ -0.86
BDNF-201ENST00000314915 TTKP33981 857 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 BTDP43251 543 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 POU6F2P78424 691 aaPredicted RBP9.68□□□□□ -0.86
BDNF-201ENST00000314915 ATAD3BQ5T9A4 648 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 GSTA5Q7RTV2 222 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 GPR180Q86V85 440 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 TMPRSS6Q8IU80 811 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 ACTRT1Q8TDG2 376 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 ANKS1AQ92625 1134 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 KRT35Q92764 455 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 TXNDC15Q96J42 360 aa9.68□□□□□ -0.86
BDNF-201ENST00000314915 TRIT1Q9H3H1 467 aaKnown RBP9.68□□□□□ -0.86
BDNF-201ENST00000314915 LIN28AQ9H9Z2 209 aaKnown RBP9.68□□□□□ -0.86
BDNF-201ENST00000314915 APPL1Q9UKG1 709 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms