RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 PCDHGB5Q9Y5G0 923 aa18.84■□□□□ 0.61
SPSB4-201ENST00000310546 CLUHO75153 1309 aa18.84■□□□□ 0.61
SPSB4-201ENST00000310546 COL4A5P29400 1685 aa18.84■□□□□ 0.61
SPSB4-201ENST00000310546 ZNF646O15015 1829 aaPredicted RBP18.84■□□□□ 0.61
SPSB4-201ENST00000310546 MYOCOSA0A1B0GUC4 107 aa18.84■□□□□ 0.61
SPSB4-201ENST00000310546 FAM86B1E9PN63 330 aa18.84■□□□□ 0.61
SPSB4-201ENST00000310546 STRNO43815 780 aa18.84■□□□□ 0.61
SPSB4-201ENST00000310546 VIL1P09327 827 aaKnown RBP18.84■□□□□ 0.61
SPSB4-201ENST00000310546 FAM86B2P0C5J1 330 aa18.84■□□□□ 0.61
SPSB4-201ENST00000310546 PMLP29590 882 aa18.84■□□□□ 0.61
SPSB4-201ENST00000310546 SERPINB8P50452 374 aa18.84■□□□□ 0.61
SPSB4-201ENST00000310546 ZNF543Q08ER8 600 aa18.84■□□□□ 0.61
SPSB4-201ENST00000310546 USH1GQ495M9 461 aa18.84■□□□□ 0.61
SPSB4-201ENST00000310546 DLK2Q6UY11 383 aa18.84■□□□□ 0.61
SPSB4-201ENST00000310546 DHX38Q92620 1227 aaKnown RBP18.84■□□□□ 0.61
SPSB4-201ENST00000310546 TIMMDC1Q9NPL8 285 aa18.84■□□□□ 0.61
SPSB4-201ENST00000310546 TUBGCP4Q9UGJ1 667 aa18.84■□□□□ 0.61
SPSB4-201ENST00000310546 CCDC195A0A1B0GUA6 201 aa18.83■□□□□ 0.61
SPSB4-201ENST00000310546 DENND3A2RUS2 1198 aa18.83■□□□□ 0.61
SPSB4-201ENST00000310546 VARSP26640 1264 aaKnown RBP18.83■□□□□ 0.61
SPSB4-201ENST00000310546 AQP5P55064 265 aa18.83■□□□□ 0.61
SPSB4-201ENST00000310546 TAS2R40P59535 323 aa18.83■□□□□ 0.61
SPSB4-201ENST00000310546 DGKZQ13574 1117 aa18.83■□□□□ 0.61
SPSB4-201ENST00000310546 TLR1Q15399 786 aa18.83■□□□□ 0.61
SPSB4-201ENST00000310546 MYLK3Q32MK0 819 aa18.83■□□□□ 0.61
SPSB4-201ENST00000310546 HSF5Q4G112 596 aaPredicted RBP18.83■□□□□ 0.61
SPSB4-201ENST00000310546 RALGPS1Q5JS13 557 aa18.83■□□□□ 0.61
SPSB4-201ENST00000310546 ADGRD1Q6QNK2 874 aa18.83■□□□□ 0.61
SPSB4-201ENST00000310546 TSHZ1Q6ZSZ6 1077 aa18.83■□□□□ 0.61
SPSB4-201ENST00000310546 ZSWIM2Q8NEG5 633 aa18.83■□□□□ 0.61
SPSB4-201ENST00000310546 PIP4K2CQ8TBX8 421 aa18.83■□□□□ 0.61
SPSB4-201ENST00000310546 IQCGQ9H095 443 aaKnown RBP18.83■□□□□ 0.61
SPSB4-201ENST00000310546 SLC26A4O43511 780 aa18.83■□□□□ 0.6
SPSB4-201ENST00000310546 PIM1P11309 404 aaPredicted RBP18.83■□□□□ 0.6
SPSB4-201ENST00000310546 HSP90AA5PQ58FG0 334 aa18.83■□□□□ 0.6
SPSB4-201ENST00000310546 AAGABQ6PD74 315 aa18.83■□□□□ 0.6
SPSB4-201ENST00000310546 TMC7Q7Z402 723 aa18.83■□□□□ 0.6
SPSB4-201ENST00000310546 ALKBH8Q96BT7 664 aaKnown RBP18.83■□□□□ 0.6
SPSB4-201ENST00000310546 CYP4F11Q9HBI6 524 aa18.83■□□□□ 0.6
SPSB4-201ENST00000310546 BARX2Q9UMQ3 279 aaPredicted RBP18.83■□□□□ 0.6
SPSB4-201ENST00000310546 KRT5P13647 590 aa18.82■□□□□ 0.6
SPSB4-201ENST00000310546 PHBP35232 272 aa18.82■□□□□ 0.6
SPSB4-201ENST00000310546 MXI1P50539 228 aa18.82■□□□□ 0.6
SPSB4-201ENST00000310546 PPIDQ08752 370 aaKnown RBP18.82■□□□□ 0.6
SPSB4-201ENST00000310546 NFIL3Q16649 462 aa18.82■□□□□ 0.6
SPSB4-201ENST00000310546 TBC1D10BQ4KMP7 808 aaPredicted RBP18.82■□□□□ 0.6
SPSB4-201ENST00000310546 IYDQ6PHW0 289 aa18.82■□□□□ 0.6
SPSB4-201ENST00000310546 STXBP4Q6ZWJ1 553 aa18.82■□□□□ 0.6
SPSB4-201ENST00000310546 POU5F2Q8N7G0 328 aa18.82■□□□□ 0.6
SPSB4-201ENST00000310546 MRPL1Q9BYD6 325 aaKnown RBP18.82■□□□□ 0.6
SPSB4-201ENST00000310546 SHCBP1LQ9BZQ2 653 aa18.82■□□□□ 0.6
SPSB4-201ENST00000310546 PPCSQ9HAB8 311 aa18.82■□□□□ 0.6
SPSB4-201ENST00000310546 KCNK4Q9NYG8 393 aa18.82■□□□□ 0.6
SPSB4-201ENST00000310546 SERPINA10Q9UK55 444 aa18.82■□□□□ 0.6
SPSB4-201ENST00000310546 SOX13Q9UN79 622 aa18.82■□□□□ 0.6
SPSB4-201ENST00000310546 BTBD19C9JJ37 291 aa18.82■□□□□ 0.6
SPSB4-201ENST00000310546 I3L4J1 428 aa18.82■□□□□ 0.6
SPSB4-201ENST00000310546 C6orf222P0C671 652 aaPredicted RBP18.82■□□□□ 0.6
SPSB4-201ENST00000310546 RAG1P15918 1043 aa18.82■□□□□ 0.6
SPSB4-201ENST00000310546 STIP1P31948 543 aaKnown RBP18.82■□□□□ 0.6
SPSB4-201ENST00000310546 NCKAP1LP55160 1127 aa18.82■□□□□ 0.6
SPSB4-201ENST00000310546 TMPRSS15P98073 1019 aa18.82■□□□□ 0.6
SPSB4-201ENST00000310546 PRKG1Q13976 671 aa18.82■□□□□ 0.6
SPSB4-201ENST00000310546 MORF4L2Q15014 288 aa18.82■□□□□ 0.6
SPSB4-201ENST00000310546 ATP13A4Q4VNC1 1196 aa18.82■□□□□ 0.6
SPSB4-201ENST00000310546 C1orf186Q6ZWK4 172 aa18.82■□□□□ 0.6
SPSB4-201ENST00000310546 ADGRG6Q86SQ4 1221 aa18.82■□□□□ 0.6
SPSB4-201ENST00000310546 RHPN2Q8IUC4 686 aa18.82■□□□□ 0.6
SPSB4-201ENST00000310546 EFCAB3Q8N7B9 438 aa18.82■□□□□ 0.6
SPSB4-201ENST00000310546 SERAC1Q96JX3 654 aa18.82■□□□□ 0.6
SPSB4-201ENST00000310546 FIZ1Q96SL8 496 aa18.82■□□□□ 0.6
SPSB4-201ENST00000310546 CYP3A7-CYP3A51PA0A087WV96 503 aa18.81■□□□□ 0.6
SPSB4-201ENST00000310546 SPDYE2BA6NHP3 402 aa18.81■□□□□ 0.6
SPSB4-201ENST00000310546 LIASO43766 372 aa18.81■□□□□ 0.6
SPSB4-201ENST00000310546 SPDYE6P0CI01 402 aa18.81■□□□□ 0.6
SPSB4-201ENST00000310546 CYP3A7P24462 503 aa18.81■□□□□ 0.6
SPSB4-201ENST00000310546 ETV4P43268 484 aa18.81■□□□□ 0.6
SPSB4-201ENST00000310546 ACAP1Q15027 740 aa18.81■□□□□ 0.6
SPSB4-201ENST00000310546 NCCRP1Q6ZVX7 275 aaPredicted RBP18.81■□□□□ 0.6
SPSB4-201ENST00000310546 SIAH1Q8IUQ4 282 aa18.81■□□□□ 0.6
SPSB4-201ENST00000310546 DIS3LQ8TF46 1054 aaKnown RBP18.81■□□□□ 0.6
SPSB4-201ENST00000310546 MZB1Q8WU39 189 aa18.81■□□□□ 0.6
SPSB4-201ENST00000310546 P2RX7Q99572 595 aaKnown RBP18.81■□□□□ 0.6
SPSB4-201ENST00000310546 TMEM121Q9BTD3 319 aa18.81■□□□□ 0.6
SPSB4-201ENST00000310546 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.81■□□□□ 0.6
SPSB4-201ENST00000310546 GINM1Q9NU53 330 aa18.81■□□□□ 0.6
SPSB4-201ENST00000310546 TMOD2Q9NZR1 351 aa18.81■□□□□ 0.6
SPSB4-201ENST00000310546 ZNRF3Q9ULT6 936 aa18.81■□□□□ 0.6
SPSB4-201ENST00000310546 HEMK1Q9Y5R4 338 aaPredicted RBP18.81■□□□□ 0.6
SPSB4-201ENST00000310546 SIPA1L1O43166 1804 aa18.81■□□□□ 0.6
SPSB4-201ENST00000310546 RBM47A0AV96 593 aaKnown RBP18.81■□□□□ 0.6
SPSB4-201ENST00000310546 SGK1O00141 431 aa18.81■□□□□ 0.6
SPSB4-201ENST00000310546 NFKBIEO00221 500 aa18.81■□□□□ 0.6
SPSB4-201ENST00000310546 DKC1O60832 514 aaKnown RBP eCLIP18.81■□□□□ 0.6
SPSB4-201ENST00000310546 TRMUO75648 421 aaKnown RBP18.81■□□□□ 0.6
SPSB4-201ENST00000310546 SLC5A2P31639 672 aa18.81■□□□□ 0.6
SPSB4-201ENST00000310546 MFAP3P55082 362 aa18.81■□□□□ 0.6
SPSB4-201ENST00000310546 MSS51Q4VC12 460 aa18.81■□□□□ 0.6
SPSB4-201ENST00000310546 KYAT3Q6YP21 454 aaKnown RBP18.81■□□□□ 0.6
SPSB4-201ENST00000310546 PALM2Q8IXS6 379 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms