RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 TRPM7Q96QT4 1865 aa5.71□□□□□ -1.49
VPS50-202ENST00000305866 ZNF106Q9H2Y7 1883 aaKnown RBP5.71□□□□□ -1.49
VPS50-202ENST00000305866 MIA3Q5JRA6 1907 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 CXorf49A8MYA2 514 aaPredicted RBP5.71□□□□□ -1.5
VPS50-202ENST00000305866 C19orf81C9J6K1 198 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 K7ENM7 598 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 TM9SF1O15321 606 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 GABBR2O75899 941 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 AOC1P19801 751 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 TBXAS1P24557 533 aaPredicted RBP5.71□□□□□ -1.5
VPS50-202ENST00000305866 MARK3P27448 753 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 RDXP35241 583 aaKnown RBP5.71□□□□□ -1.5
VPS50-202ENST00000305866 VHLP40337 213 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 ARL4CP56559 192 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 RPL26P61254 145 aaKnown RBP5.71□□□□□ -1.5
VPS50-202ENST00000305866 KCNC4Q03721 635 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 CDC16Q13042 620 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 ACAP1Q15027 740 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 USH1GQ495M9 461 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 RAB6CQ53S08 254 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 SGO2Q562F6 1265 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 DUS1LQ6P1R4 473 aaKnown RBP5.71□□□□□ -1.5
VPS50-202ENST00000305866 FAM47EQ6ZV65 393 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 CAND1Q86VP6 1230 aaKnown RBP5.71□□□□□ -1.5
VPS50-202ENST00000305866 CDAN1Q8IWY9 1227 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 ADGRF2Q8IZF7 708 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 TEKT4Q8WW24 435 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 SLC44A1Q8WWI5 657 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 DPF3Q92784 378 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 ISL2Q96A47 359 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 C7orf26Q96N11 449 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 TTC25Q96NG3 672 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 NUDCD1Q96RS6 583 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 CGRRF1Q99675 332 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 NSRP1Q9H0G5 558 aaKnown RBP5.71□□□□□ -1.5
VPS50-202ENST00000305866 RAB6CQ9H0N0 254 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 GPAMQ9HCL2 828 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 FZD9O00144 591 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 WNT10BO00744 389 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 PIAS1O75925 651 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 TM7SF2O76062 418 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 ZWINTO95229 277 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 LUC7L3O95232 432 aaKnown RBP5.71□□□□□ -1.5
VPS50-202ENST00000305866 LDHAP00338 332 aaKnown RBP5.71□□□□□ -1.5
VPS50-202ENST00000305866 TFAP2AP05549 437 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 CCND2P30279 289 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 CACNB3P54284 484 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 NRLP54845 237 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 VCPP55072 806 aaKnown RBP5.71□□□□□ -1.5
VPS50-202ENST00000305866 MAP2K1Q02750 393 aaPredicted RBP5.71□□□□□ -1.5
VPS50-202ENST00000305866 TRIP13Q15645 432 aaPredicted RBP5.71□□□□□ -1.5
VPS50-202ENST00000305866 ZBTB41Q5SVQ8 909 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 DHRS4L2Q6PKH6 230 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 CYS1Q717R9 158 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 ARCQ7LC44 396 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 ALYREFQ86V81 257 aaKnown RBP5.71□□□□□ -1.5
VPS50-202ENST00000305866 TCP10LQ8TDR4 215 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 KHSRPQ92945 711 aaKnown RBP eCLIP5.71□□□□□ -1.58e-7■■■□□ 18.8
VPS50-202ENST00000305866 ITFG2Q969R8 447 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 RBM41Q96IZ5 413 aaKnown RBP5.71□□□□□ -1.5
VPS50-202ENST00000305866 AGBL1Q96MI9 1066 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 LRRC37BQ96QE4 947 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 PEBP4Q96S96 227 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 BCO2Q9BYV7 579 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 OSBPL8Q9BZF1 889 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 CTTNBP2NLQ9P2B4 639 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.71□□□□□ -1.5
VPS50-202ENST00000305866 MTRF1LQ9UGC7 380 aaKnown RBP5.71□□□□□ -1.5
VPS50-202ENST00000305866 ZNF510Q9Y2H8 683 aa5.71□□□□□ -1.5
VPS50-202ENST00000305866 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.71□□□□□ -1.5
VPS50-202ENST00000305866 SF3B1O75533 1304 aaKnown RBP eCLIP5.71□□□□□ -1.5
VPS50-202ENST00000305866 RASA4BC9J798 803 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 RASA4O43374 803 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 TFDP1Q14186 410 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 SLFN12LQ6IEE8 588 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 TMEM154Q6P9G4 183 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 LVRNQ6Q4G3 990 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 LIMS2Q7Z4I7 341 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 NET1Q7Z628 596 aaPredicted RBP5.7□□□□□ -1.5
VPS50-202ENST00000305866 CCDC105Q8IYK2 499 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 PPM1KQ8N3J5 372 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 RBM15BQ8NDT2 890 aaKnown RBP5.7□□□□□ -1.5
VPS50-202ENST00000305866 FAM172AQ8WUF8 416 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 CPA5Q8WXQ8 436 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 YIPF3Q9GZM5 350 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 ZCWPW1Q9H0M4 648 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 PCIF1Q9H4Z3 704 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 POPDC2Q9HBU9 364 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 TJP2Q9UDY2 1190 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 ANAPC5Q9UJX4 755 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 MTUS1Q9ULD2 1270 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 STK38LQ9Y2H1 464 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 KIAA1671Q9BY89 1806 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 EIF4E1BA6NMX2 242 aaKnown RBP5.7□□□□□ -1.5
VPS50-202ENST00000305866 THAP12O43422 761 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 HNRNPCL1O60812 293 aaKnown RBP5.7□□□□□ -1.5
VPS50-202ENST00000305866 ALDH2P05091 517 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 SUPT20HL2P0C7V6 817 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 ANPEPP15144 967 aa5.7□□□□□ -1.5
VPS50-202ENST00000305866 EIF4BP23588 611 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms