RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 LIN7AO14910 233 aaPredicted RBP7.91□□□□□ -1.14
SF3B3-201ENST00000302516 ZNF23P17027 643 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 HIST2H2ACQ16777 129 aaPredicted RBP7.91□□□□□ -1.14
SF3B3-201ENST00000302516 HIST2H2AA3Q6FI13 130 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 ERO1BQ86YB8 467 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 C19orf18Q8NEA5 215 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 DDX17Q92841 729 aaKnown RBP7.91□□□□□ -1.14
SF3B3-201ENST00000302516 CENPTQ96BT3 561 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 PPP1R16BQ96T49 567 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 ZNF184Q99676 751 aaPredicted RBP7.91□□□□□ -1.14
SF3B3-201ENST00000302516 AFF4Q9UHB7 1163 aaKnown RBP7.91□□□□□ -1.14
SF3B3-201ENST00000302516 RAB21Q9UL25 225 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 NPHP3-ACAD11A0A0J9YXS1 232 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 GUCY1A2P33402 732 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 ATG9AQ7Z3C6 839 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 HDDC2Q7Z4H3 204 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 FAM111AQ96PZ2 611 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 CDK5RAP1Q96SZ6 601 aaKnown RBP7.91□□□□□ -1.14
SF3B3-201ENST00000302516 GANQ9H2C0 597 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 CAAP1Q9H8G2 361 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 PRMT7Q9NVM4 692 aaPredicted RBP7.91□□□□□ -1.14
SF3B3-201ENST00000302516 BTBD7Q9P203 1132 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 HEY2Q9UBP5 337 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 UBA2Q9UBT2 640 aaPredicted RBP7.91□□□□□ -1.14
SF3B3-201ENST00000302516 ZC3H4Q9UPT8 1303 aaKnown RBP7.91□□□□□ -1.14
SF3B3-201ENST00000302516 F5H423 210 aaPredicted RBP7.91□□□□□ -1.14
SF3B3-201ENST00000302516 VWA5AO00534 786 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 NMT1P30419 496 aaKnown RBP7.91□□□□□ -1.14
SF3B3-201ENST00000302516 CUL2Q13617 745 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 TSNQ15631 228 aaKnown RBP7.91□□□□□ -1.14
SF3B3-201ENST00000302516 MRNIPQ6NTE8 343 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 EEPD1Q7L9B9 569 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 RNF149Q8NC42 400 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 TMEM120AQ9BXJ8 343 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 NCKIPSDQ9NZQ3 722 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 NAGPAQ9UK23 515 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 SLC39A10Q9ULF5 831 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 SORCS3Q9UPU3 1222 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 F5H6K3 240 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 RPS6KA4O75676 772 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 PDE9AO76083 593 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 RARBP10826 455 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 KLRC3Q07444 240 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 DNAJC3Q13217 504 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 OASLQ15646 514 aaKnown RBP7.91□□□□□ -1.14
SF3B3-201ENST00000302516 CYP51A1Q16850 503 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 CYP4Z2PQ8N1L4 340 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 MSL3Q8N5Y2 521 aaKnown RBP7.91□□□□□ -1.14
SF3B3-201ENST00000302516 OR2W6PQ8NHA6 318 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 MYH1P12882 1939 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 MYH2Q9UKX2 1941 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 MYH4Q9Y623 1939 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 SF3B1O75533 1304 aaKnown RBP eCLIP7.91□□□□□ -1.148e-6■■■■■ 80.9
SF3B3-201ENST00000302516 ADGRA2Q96PE1 1338 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 EIF4E1BA6NMX2 242 aaKnown RBP7.91□□□□□ -1.14
SF3B3-201ENST00000302516 BCL10O95999 233 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 PGK2P07205 417 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 KCNMA1Q12791 1236 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 BFSP2Q13515 415 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 ARHGAP17Q68EM7 881 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 RFWD2Q8NHY2 731 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 KCTD14Q9BQ13 255 aaPredicted RBP7.91□□□□□ -1.14
SF3B3-201ENST00000302516 KLHL25Q9H0H3 589 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 THAP1Q9NVV9 213 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 DPYSL4O14531 572 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 NR2C2P49116 596 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 SEC24CP53992 1094 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 PSMC6P62333 389 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 EPS8Q12929 822 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 STK4Q13043 487 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 EIF2B5Q13144 721 aaKnown RBP7.9□□□□□ -1.14
SF3B3-201ENST00000302516 SLC26A11Q86WA9 606 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 TMPRSS6Q8IU80 811 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 NSUN4Q96CB9 384 aaKnown RBP7.9□□□□□ -1.14
SF3B3-201ENST00000302516 SIK2Q9H0K1 926 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 TMCO1Q9UM00 188 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 ALDH1A1P00352 501 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 KRT6BP04259 564 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 PON1P27169 355 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 PRDX5P30044 214 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 AKT1P31749 480 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 KRT6CP48668 564 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 GEMP55040 296 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 COG2Q14746 738 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 RBM46Q8TBY0 533 aaKnown RBP7.9□□□□□ -1.14
SF3B3-201ENST00000302516 ZNF483Q8TF39 744 aaPredicted RBP7.9□□□□□ -1.14
SF3B3-201ENST00000302516 CELF4Q9BZC1 486 aaKnown RBP7.9□□□□□ -1.14
SF3B3-201ENST00000302516 RAVER2Q9HCJ3 691 aaKnown RBP7.9□□□□□ -1.14
SF3B3-201ENST00000302516 KRT84Q9NSB2 600 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 TRMT6Q9UJA5 497 aaKnown RBP7.9□□□□□ -1.14
SF3B3-201ENST00000302516 RNF112Q9ULX5 631 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 TBX20Q9UMR3 447 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 C2orf81A6NN90 581 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 RAD17O75943 681 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 FBXO21O94952 628 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 HLA-DRAP01903 254 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 XRCC4Q13426 336 aa7.9□□□□□ -1.14
SF3B3-201ENST00000302516 ZNF772Q68DY9 489 aaPredicted RBP7.9□□□□□ -1.14
SF3B3-201ENST00000302516 PTRHD1Q6GMV3 140 aaKnown RBP7.9□□□□□ -1.14
SF3B3-201ENST00000302516 IZUMO2Q6UXV1 221 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms