RNA–Protein interactions for RNA: ENST00000301453.7

OTUB1-201, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,493 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-201ENST00000301453 STRIP2Q9ULQ0 834 aa17.06■□□□□ 0.32
OTUB1-201ENST00000301453 PTPN4P29074 926 aa17.06■□□□□ 0.32
OTUB1-201ENST00000301453 MIPP30301 263 aa17.06■□□□□ 0.32
OTUB1-201ENST00000301453 ELK3P41970 407 aa17.06■□□□□ 0.32
OTUB1-201ENST00000301453 RAD23BP54727 409 aa17.06■□□□□ 0.32
OTUB1-201ENST00000301453 EIF3EP60228 445 aaKnown RBP17.06■□□□□ 0.32
OTUB1-201ENST00000301453 YWHAEP62258 255 aaKnown RBP17.06■□□□□ 0.32
OTUB1-201ENST00000301453 BASP1P80723 227 aaKnown RBP17.06■□□□□ 0.32
OTUB1-201ENST00000301453 MMRN1Q13201 1228 aa17.06■□□□□ 0.32
OTUB1-201ENST00000301453 SH3PXD2AQ5TCZ1 1133 aa17.06■□□□□ 0.32
OTUB1-201ENST00000301453 RFX6Q8HWS3 928 aa17.06■□□□□ 0.32
OTUB1-201ENST00000301453 MICALL2Q8IY33 904 aa17.06■□□□□ 0.32
OTUB1-201ENST00000301453 TMEM192Q8IY95 271 aa17.06■□□□□ 0.32
OTUB1-201ENST00000301453 LRRC71Q8N4P6 559 aa17.06■□□□□ 0.32
OTUB1-201ENST00000301453 TTC13Q8NBP0 860 aa17.06■□□□□ 0.32
OTUB1-201ENST00000301453 CMASQ8NFW8 434 aaPredicted RBP17.06■□□□□ 0.32
OTUB1-201ENST00000301453 FNIP1Q8TF40 1166 aa17.06■□□□□ 0.32
OTUB1-201ENST00000301453 HSPH1Q92598 858 aa17.06■□□□□ 0.32
OTUB1-201ENST00000301453 VPS11Q9H270 941 aa17.06■□□□□ 0.32
OTUB1-201ENST00000301453 LHX5Q9H2C1 402 aa17.06■□□□□ 0.32
OTUB1-201ENST00000301453 NRBP2Q9NSY0 501 aa17.06■□□□□ 0.32
OTUB1-201ENST00000301453 TNS1Q9HBL0 1735 aaKnown RBP17.05■□□□□ 0.32
OTUB1-201ENST00000301453 NDC80O14777 642 aa17.05■□□□□ 0.32
OTUB1-201ENST00000301453 TM9SF1O15321 606 aa17.05■□□□□ 0.32
OTUB1-201ENST00000301453 PRKCBP05771 671 aa17.05■□□□□ 0.32
OTUB1-201ENST00000301453 RBP3P10745 1247 aa17.05■□□□□ 0.32
OTUB1-201ENST00000301453 ETV4P43268 484 aa17.05■□□□□ 0.32
OTUB1-201ENST00000301453 EN1Q05925 392 aaPredicted RBP17.05■□□□□ 0.32
OTUB1-201ENST00000301453 LAMTOR4Q0VGL1 99 aa17.05■□□□□ 0.32
OTUB1-201ENST00000301453 SPDYAQ5MJ70 313 aa17.05■□□□□ 0.32
OTUB1-201ENST00000301453 CDCA2Q69YH5 1023 aaPredicted RBP17.05■□□□□ 0.32
OTUB1-201ENST00000301453 RFWD3Q6PCD5 774 aa17.05■□□□□ 0.32
OTUB1-201ENST00000301453 PDIK1LQ8N165 341 aa17.05■□□□□ 0.32
OTUB1-201ENST00000301453 RNF149Q8NC42 400 aa17.05■□□□□ 0.32
OTUB1-201ENST00000301453 KCTD6Q8NC69 237 aa17.05■□□□□ 0.32
OTUB1-201ENST00000301453 NUDCD1Q96RS6 583 aa17.05■□□□□ 0.32
OTUB1-201ENST00000301453 PEBP4Q96S96 227 aa17.05■□□□□ 0.32
OTUB1-201ENST00000301453 ARL8BQ9NVJ2 186 aa17.05■□□□□ 0.32
OTUB1-201ENST00000301453 STK32BQ9NY57 414 aa17.05■□□□□ 0.32
OTUB1-201ENST00000301453 LNPEPQ9UIQ6 1025 aa17.05■□□□□ 0.32
OTUB1-201ENST00000301453 A0A0G2JND7 137 aa17.05■□□□□ 0.32
OTUB1-201ENST00000301453 APOC4-APOC2K7ER74 178 aa17.05■□□□□ 0.32
OTUB1-201ENST00000301453 PPP1R12AO14974 1030 aaPredicted RBP17.05■□□□□ 0.32
OTUB1-201ENST00000301453 AVILO75366 819 aa17.05■□□□□ 0.32
OTUB1-201ENST00000301453 APOC2P02655 101 aa17.05■□□□□ 0.32
OTUB1-201ENST00000301453 GJB1P08034 283 aa17.05■□□□□ 0.32
OTUB1-201ENST00000301453 DHRS4L1P0CG22 281 aa17.05■□□□□ 0.32
OTUB1-201ENST00000301453 TCF7P36402 384 aaPredicted RBP17.05■□□□□ 0.32
OTUB1-201ENST00000301453 FAAP100Q0VG06 881 aa17.05■□□□□ 0.32
OTUB1-201ENST00000301453 HADHQ16836 314 aaKnown RBP17.05■□□□□ 0.32
OTUB1-201ENST00000301453 FYB2Q5VWT5 728 aa17.05■□□□□ 0.32
OTUB1-201ENST00000301453 EP400NLQ6ZTU2 488 aa17.05■□□□□ 0.32
OTUB1-201ENST00000301453 ZNF398Q8TD17 642 aa17.05■□□□□ 0.32
OTUB1-201ENST00000301453 SPDL1Q96EA4 605 aa17.05■□□□□ 0.32
OTUB1-201ENST00000301453 CADM1Q9BY67 442 aaKnown RBP17.05■□□□□ 0.32
OTUB1-201ENST00000301453 SIX4Q9UIU6 781 aa17.05■□□□□ 0.32
OTUB1-201ENST00000301453 LRRC42Q9Y546 428 aa17.05■□□□□ 0.32
OTUB1-201ENST00000301453 TCRBV9S1A1TA0A576 114 aa17.04■□□□□ 0.32
OTUB1-201ENST00000301453 H0Y3Z8 333 aa17.04■□□□□ 0.32
OTUB1-201ENST00000301453 B4GALT5O43286 388 aa17.04■□□□□ 0.32
OTUB1-201ENST00000301453 MARK3P27448 753 aa17.04■□□□□ 0.32
OTUB1-201ENST00000301453 POLR2BP30876 1174 aaKnown RBP17.04■□□□□ 0.32
OTUB1-201ENST00000301453 NEK3P51956 506 aa17.04■□□□□ 0.32
OTUB1-201ENST00000301453 EFNA5P52803 228 aa17.04■□□□□ 0.32
OTUB1-201ENST00000301453 TAF11Q15544 211 aa17.04■□□□□ 0.32
OTUB1-201ENST00000301453 SEPT7Q16181 437 aaKnown RBP17.04■□□□□ 0.32
OTUB1-201ENST00000301453 KBTBD12Q3ZCT8 623 aa17.04■□□□□ 0.32
OTUB1-201ENST00000301453 EEF1DP3Q658K8 133 aa17.04■□□□□ 0.32
OTUB1-201ENST00000301453 ENDOVQ8N8Q3 282 aaKnown RBP17.04■□□□□ 0.32
OTUB1-201ENST00000301453 FRMD8P1Q9BZ68 369 aaPredicted RBP17.04■□□□□ 0.32
OTUB1-201ENST00000301453 SAR1AQ9NR31 198 aa17.04■□□□□ 0.32
OTUB1-201ENST00000301453 HEY2Q9UBP5 337 aa17.04■□□□□ 0.32
OTUB1-201ENST00000301453 C2orf71A6NGG8 1288 aa17.04■□□□□ 0.32
OTUB1-201ENST00000301453 EIF4E1BA6NMX2 242 aaKnown RBP17.04■□□□□ 0.32
OTUB1-201ENST00000301453 ZBTB42B2RXF5 422 aa17.04■□□□□ 0.32
OTUB1-201ENST00000301453 KBTBD13C9JR72 458 aa17.04■□□□□ 0.32
OTUB1-201ENST00000301453 TRUB2O95900 331 aaKnown RBP17.04■□□□□ 0.32
OTUB1-201ENST00000301453 TRNP1Q6NT89 227 aa17.04■□□□□ 0.32
OTUB1-201ENST00000301453 CYP4V2Q6ZWL3 525 aaPredicted RBP17.04■□□□□ 0.32
OTUB1-201ENST00000301453 PRPF39Q86UA1 669 aaKnown RBP17.04■□□□□ 0.32
OTUB1-201ENST00000301453 ZC3H18Q86VM9 953 aaKnown RBP17.04■□□□□ 0.32
OTUB1-201ENST00000301453 TRIM50Q86XT4 487 aa17.04■□□□□ 0.32
OTUB1-201ENST00000301453 SLC4A11Q8NBS3 891 aa17.04■□□□□ 0.32
OTUB1-201ENST00000301453 DNERQ8NFT8 737 aa17.04■□□□□ 0.32
OTUB1-201ENST00000301453 SPATA18Q8TC71 538 aa17.04■□□□□ 0.32
OTUB1-201ENST00000301453 JDP2Q8WYK2 163 aa17.04■□□□□ 0.32
OTUB1-201ENST00000301453 ZBTB10Q96DT7 871 aa17.04■□□□□ 0.32
OTUB1-201ENST00000301453 PTCD3Q96EY7 689 aaKnown RBP17.04■□□□□ 0.32
OTUB1-201ENST00000301453 NAF1Q96HR8 494 aaKnown RBP17.04■□□□□ 0.32
OTUB1-201ENST00000301453 FAM167BQ9BTA0 163 aa17.04■□□□□ 0.32
OTUB1-201ENST00000301453 CALN1Q9BXU9 219 aa17.04■□□□□ 0.32
OTUB1-201ENST00000301453 PTPRHQ9HD43 1115 aa17.04■□□□□ 0.32
OTUB1-201ENST00000301453 FBXO6Q9NRD1 293 aaPredicted RBP17.04■□□□□ 0.32
OTUB1-201ENST00000301453 C19orf81C9J6K1 198 aa17.03■□□□□ 0.32
OTUB1-201ENST00000301453 LPXNO60711 386 aa17.03■□□□□ 0.32
OTUB1-201ENST00000301453 FAM155BO75949 473 aa17.03■□□□□ 0.32
OTUB1-201ENST00000301453 C1QAP02745 245 aa17.03■□□□□ 0.32
OTUB1-201ENST00000301453 MT-ND3P03897 115 aa17.03■□□□□ 0.32
OTUB1-201ENST00000301453 TROVE2P10155 538 aaKnown RBP eCLIP17.03■□□□□ 0.32
OTUB1-201ENST00000301453 PROZP22891 400 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms