RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.38■□□□□ 0.05
SCN3B-201ENST00000299333 DUSP10Q9Y6W6 482 aa15.38■□□□□ 0.05
SCN3B-201ENST00000299333 IGSF1Q8N6C5 1336 aa15.38■□□□□ 0.05
SCN3B-201ENST00000299333 RAG1P15918 1043 aa15.38■□□□□ 0.05
SCN3B-201ENST00000299333 CHRM3P20309 590 aa15.38■□□□□ 0.05
SCN3B-201ENST00000299333 PTGER2P43116 358 aa15.38■□□□□ 0.05
SCN3B-201ENST00000299333 GJB7Q6PEY0 223 aa15.38■□□□□ 0.05
SCN3B-201ENST00000299333 ANKRD49Q8WVL7 239 aa15.38■□□□□ 0.05
SCN3B-201ENST00000299333 EIF3LQ9Y262 564 aaKnown RBP15.38■□□□□ 0.05
SCN3B-201ENST00000299333 EPHB2P29323 1055 aa15.38■□□□□ 0.05
SCN3B-201ENST00000299333 EPC2Q52LR7 807 aa15.38■□□□□ 0.05
SCN3B-201ENST00000299333 SEL1L3Q68CR1 1132 aa15.38■□□□□ 0.05
SCN3B-201ENST00000299333 KRT77Q7Z794 578 aa15.38■□□□□ 0.05
SCN3B-201ENST00000299333 ATG16L2Q8NAA4 619 aa15.38■□□□□ 0.05
SCN3B-201ENST00000299333 TRIM62Q9BVG3 475 aa15.38■□□□□ 0.05
SCN3B-201ENST00000299333 KCTD10Q9H3F6 313 aa15.38■□□□□ 0.05
SCN3B-201ENST00000299333 RUVBL2Q9Y230 463 aaKnown RBP15.38■□□□□ 0.05
SCN3B-201ENST00000299333 MROH7-TTC4A0A0A0MT08 1334 aa15.38■□□□□ 0.05
SCN3B-201ENST00000299333 KDM6BO15054 1643 aa15.38■□□□□ 0.05
SCN3B-201ENST00000299333 SHROOM2Q13796 1616 aa15.38■□□□□ 0.05
SCN3B-201ENST00000299333 CCDC189A1A4V9 331 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 APOA4P06727 396 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 PIK3R1P27986 724 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 ABATP80404 500 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 FCHO2Q0JRZ9 810 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 SHROOM1Q2M3G4 852 aaPredicted RBP15.37■□□□□ 0.05
SCN3B-201ENST00000299333 ALFQ53S48 1182 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 FASTKD5Q7L8L6 764 aaKnown RBP15.37■□□□□ 0.05
SCN3B-201ENST00000299333 VN1R5Q7Z5H4 357 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 ZKSCAN4Q969J2 545 aaPredicted RBP15.37■□□□□ 0.05
SCN3B-201ENST00000299333 REEP2Q9BRK0 252 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 GRIP2Q9C0E4 1043 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 CCSER1Q9C0I3 900 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 SMARCAD1Q9H4L7 1026 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 GTF2A1LQ9UNN4 478 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 GLRBP48167 497 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 QRICH1Q2TAL8 776 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 IRGCQ6NXR0 463 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 KBTBD2Q8IY47 623 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 BTBD10Q9BSF8 475 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 THAP2Q9H0W7 228 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 MYRFQ9Y2G1 1151 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 CENPXA8MT69 81 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 FEN1P39748 380 aaKnown RBP15.37■□□□□ 0.05
SCN3B-201ENST00000299333 PTK6Q13882 451 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 ZNF618Q5T7W0 954 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 UTS2BQ765I0 119 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 KRT74Q7RTS7 529 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 LRRC71Q8N4P6 559 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 TBC1D19Q8N5T2 526 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 GIMAP8Q8ND71 665 aaPredicted RBP15.37■□□□□ 0.05
SCN3B-201ENST00000299333 SLC10A4Q96EP9 437 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 CDC42EP4Q9H3Q1 356 aaKnown RBP15.37■□□□□ 0.05
SCN3B-201ENST00000299333 TK2O00142 265 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 MAP3K13O43283 966 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 GSTT1P30711 240 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 NT5C2P49902 561 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 MTTPP55157 894 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 DGUOKQ16854 277 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 EPHA10Q5JZY3 1008 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 OTUD3Q5T2D3 398 aaPredicted RBP15.37■□□□□ 0.05
SCN3B-201ENST00000299333 KRT78Q8N1N4 520 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 PRDM5Q9NQX1 630 aaPredicted RBP15.37■□□□□ 0.05
SCN3B-201ENST00000299333 MYMKA6NI61 221 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 FAM196BA6NMK8 535 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 RAD17O75943 681 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 PRDX5P30044 214 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 RGS4P49798 205 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 PDK1Q15118 436 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 CACHD1Q5VU97 1274 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 C11orf96Q7Z7L8 435 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 SLC44A2Q8IWA5 706 aaPredicted RBP15.37■□□□□ 0.05
SCN3B-201ENST00000299333 FAM45AQ8TCE6 357 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 TNIP3Q96KP6 325 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 SH2D3AQ9BRG2 576 aa15.37■□□□□ 0.05
SCN3B-201ENST00000299333 AVENQ9NQS1 362 aaPredicted RBP15.37■□□□□ 0.05
SCN3B-201ENST00000299333 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.37■□□□□ 0.05
SCN3B-201ENST00000299333 APBA3O96018 575 aa15.36■□□□□ 0.05
SCN3B-201ENST00000299333 SEPHS2Q99611 448 aa15.36■□□□□ 0.05
SCN3B-201ENST00000299333 ZSWIM1Q9BR11 485 aa15.36■□□□□ 0.05
SCN3B-201ENST00000299333 FAM192AQ9GZU8 254 aa15.36■□□□□ 0.05
SCN3B-201ENST00000299333 FBXO9Q9UK97 447 aaPredicted RBP15.36■□□□□ 0.05
SCN3B-201ENST00000299333 H2AFYO75367 372 aaKnown RBP15.36■□□□□ 0.05
SCN3B-201ENST00000299333 RARGP13631 454 aa15.36■□□□□ 0.05
SCN3B-201ENST00000299333 YWHABP31946 246 aaKnown RBP15.36■□□□□ 0.05
SCN3B-201ENST00000299333 PDIA5Q14554 519 aa15.36■□□□□ 0.05
SCN3B-201ENST00000299333 SNRNP35Q16560 246 aaKnown RBP15.36■□□□□ 0.05
SCN3B-201ENST00000299333 KLHDC7AQ5VTJ3 777 aa15.36■□□□□ 0.05
SCN3B-201ENST00000299333 STOX1Q6ZVD7 989 aa15.36■□□□□ 0.05
SCN3B-201ENST00000299333 USP49Q70CQ1 688 aa15.36■□□□□ 0.05
SCN3B-201ENST00000299333 ZNF333Q96JL9 665 aa15.36■□□□□ 0.05
SCN3B-201ENST00000299333 CCSER2Q9H7U1 834 aa15.36■□□□□ 0.05
SCN3B-201ENST00000299333 ANKZF1Q9H8Y5 726 aa15.36■□□□□ 0.05
SCN3B-201ENST00000299333 FAM49BQ9NUQ9 324 aa15.36■□□□□ 0.05
SCN3B-201ENST00000299333 FBXO40Q9UH90 709 aa15.36■□□□□ 0.05
SCN3B-201ENST00000299333 AGAP1Q9UPQ3 857 aa15.36■□□□□ 0.05
SCN3B-201ENST00000299333 SOAT2O75908 522 aa15.36■□□□□ 0.05
SCN3B-201ENST00000299333 NCOA4Q13772 614 aa15.36■□□□□ 0.05
SCN3B-201ENST00000299333 WDR36Q8NI36 951 aaKnown RBP15.36■□□□□ 0.05
SCN3B-201ENST00000299333 PAFAH2Q99487 392 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms