RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 RABGGTBP53611 331 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 GDF10P55107 478 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 ZNF200P98182 395 aaPredicted RBP10.59□□□□□ -0.71
FOXN4-201ENST00000299162 C1QBPQ07021 282 aaKnown RBP10.59□□□□□ -0.71
FOXN4-201ENST00000299162 ARHGAP1Q07960 439 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 TMEM132DQ14C87 1099 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 CCDC142Q17RM4 750 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 SLC10A6Q3KNW5 377 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 TRIM72Q6ZMU5 477 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 SPOCD1Q6ZMY3 1216 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 TRPM8Q7Z2W7 1104 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 PHF13Q86YI8 300 aaPredicted RBP10.59□□□□□ -0.71
FOXN4-201ENST00000299162 C4orf33Q8N1A6 199 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 CCDC89Q8N998 374 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 ACTL9Q8TC94 416 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 GRK7Q8WTQ7 553 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.59□□□□□ -0.71
FOXN4-201ENST00000299162 ADPGKQ9BRR6 497 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 B3GNT5Q9BYG0 378 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.59□□□□□ -0.71
FOXN4-201ENST00000299162 NR2E3Q9Y5X4 410 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 TMEM120BA0PK00 339 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 MICAL2O94851 1124 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 CETPP11597 493 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 ADORA2BP29275 332 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 EIF3BP55884 814 aaKnown RBP10.59□□□□□ -0.71
FOXN4-201ENST00000299162 OTUD4Q01804 1114 aaKnown RBP10.59□□□□□ -0.71
FOXN4-201ENST00000299162 PPIL2Q13356 520 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 CLUL1Q15846 466 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 SCUBE3Q8IX30 993 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 FAM71DQ8N9W8 422 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 OR6J1Q8NGC5 347 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 OR6B3Q8NGW1 331 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 PLEKHG4BQ96PX9 1271 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 MAGEB5Q9BZ81 275 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.59□□□□□ -0.71
FOXN4-201ENST00000299162 NINJ2Q9NZG7 142 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 MKI67P46013 3256 aaKnown RBP10.59□□□□□ -0.71
FOXN4-201ENST00000299162 WDR91A4D1P6 747 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 ABLIM1O14639 778 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 TP73O15350 636 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 TJP3O95049 919 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 KRT15P19012 456 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 TPP2P29144 1249 aaPredicted RBP10.59□□□□□ -0.71
FOXN4-201ENST00000299162 RAD23BP54727 409 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 BEX3Q00994 111 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 PTPN11Q06124 597 aaPredicted RBP10.59□□□□□ -0.71
FOXN4-201ENST00000299162 TSHZ1Q6ZSZ6 1077 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 SPATA21Q7Z572 469 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.59□□□□□ -0.71
FOXN4-201ENST00000299162 RSAD2Q8WXG1 361 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 CFAP57Q96MR6 1250 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 TRAIPQ9BWF2 469 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 TXLNGYQ9BZA5 131 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 PDZD7Q9H5P4 517 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 NEU2Q9Y3R4 380 aa10.59□□□□□ -0.71
FOXN4-201ENST00000299162 LOXHD1Q8IVV2 1947 aa10.58□□□□□ -0.72
FOXN4-201ENST00000299162 EXOC1LA0A1B0GW35 172 aa10.58□□□□□ -0.72
FOXN4-201ENST00000299162 E5RJQ4 531 aa10.58□□□□□ -0.72
FOXN4-201ENST00000299162 BRAFP15056 766 aa10.58□□□□□ -0.72
FOXN4-201ENST00000299162 PDIA2Q13087 525 aaKnown RBP10.58□□□□□ -0.72
FOXN4-201ENST00000299162 XRCC4Q13426 336 aa10.58□□□□□ -0.72
FOXN4-201ENST00000299162 CYP1B1Q16678 543 aa10.58□□□□□ -0.72
FOXN4-201ENST00000299162 BBS9Q3SYG4 887 aa10.58□□□□□ -0.72
FOXN4-201ENST00000299162 C6orf118Q5T5N4 469 aa10.58□□□□□ -0.72
FOXN4-201ENST00000299162 AGBL2Q5U5Z8 902 aa10.58□□□□□ -0.72
FOXN4-201ENST00000299162 ZNF449Q6P9G9 518 aa10.58□□□□□ -0.72
FOXN4-201ENST00000299162 PLPPR4Q7Z2D5 763 aa10.58□□□□□ -0.72
FOXN4-201ENST00000299162 EXOC3L1Q86VI1 746 aa10.58□□□□□ -0.72
FOXN4-201ENST00000299162 TMEM174Q8WUU8 243 aa10.58□□□□□ -0.72
FOXN4-201ENST00000299162 NDRG1Q92597 394 aaKnown RBP10.58□□□□□ -0.72
FOXN4-201ENST00000299162 ACAP3Q96P50 834 aa10.58□□□□□ -0.72
FOXN4-201ENST00000299162 EIF2AQ9BY44 585 aaKnown RBP10.58□□□□□ -0.72
FOXN4-201ENST00000299162 FZD8Q9H461 694 aa10.58□□□□□ -0.72
FOXN4-201ENST00000299162 ATP8B3O60423 1300 aa10.58□□□□□ -0.72
FOXN4-201ENST00000299162 ASB14A6NK59 587 aa10.58□□□□□ -0.72
FOXN4-201ENST00000299162 TCP11X1B4DZS4 312 aa10.58□□□□□ -0.72
FOXN4-201ENST00000299162 PSTPIP1O43586 416 aa10.58□□□□□ -0.72
FOXN4-201ENST00000299162 MGRN1O60291 552 aa10.58□□□□□ -0.72
FOXN4-201ENST00000299162 LRCH4O75427 683 aa10.58□□□□□ -0.72
FOXN4-201ENST00000299162 RNF8O76064 485 aa10.58□□□□□ -0.72
FOXN4-201ENST00000299162 KRT16P08779 473 aa10.58□□□□□ -0.72
FOXN4-201ENST00000299162 PDGFRAP16234 1089 aa10.58□□□□□ -0.72
FOXN4-201ENST00000299162 ITIH2P19823 946 aa10.58□□□□□ -0.72
FOXN4-201ENST00000299162 CTCFP49711 727 aaPredicted RBP10.58□□□□□ -0.72
FOXN4-201ENST00000299162 CDH6P55285 790 aa10.58□□□□□ -0.72
FOXN4-201ENST00000299162 GRIK4Q16099 956 aa10.58□□□□□ -0.72
FOXN4-201ENST00000299162 SLC4A11Q8NBS3 891 aa10.58□□□□□ -0.72
FOXN4-201ENST00000299162 EXD1Q8NHP7 514 aa10.58□□□□□ -0.72
FOXN4-201ENST00000299162 C12orf65Q9H3J6 166 aaKnown RBP10.58□□□□□ -0.72
FOXN4-201ENST00000299162 MROH8Q9H579 483 aa10.58□□□□□ -0.72
FOXN4-201ENST00000299162 ALG13Q9NP73 1137 aaKnown RBP10.58□□□□□ -0.72
FOXN4-201ENST00000299162 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.58□□□□□ -0.72
FOXN4-201ENST00000299162 DPP3Q9NY33 737 aa10.58□□□□□ -0.72
FOXN4-201ENST00000299162 TUBGCP4Q9UGJ1 667 aa10.58□□□□□ -0.72
FOXN4-201ENST00000299162 ADCY6O43306 1168 aa10.57□□□□□ -0.72
FOXN4-201ENST00000299162 TTC4O95801 387 aa10.57□□□□□ -0.72
FOXN4-201ENST00000299162 SMPD1P17405 629 aa10.57□□□□□ -0.72
FOXN4-201ENST00000299162 IVDP26440 423 aa10.57□□□□□ -0.72
FOXN4-201ENST00000299162 MIPP30301 263 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms