RNA–Protein interactions for RNA: ENST00000297439.3

DEFB1-201, Transcript of defensin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEFB1, Length 478 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEFB1-201ENST00000297439 PRAMEF18Q5VWM3 479 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 EEF1DP3Q658K8 133 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 EFCAB12Q6NXP0 572 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 DENND1BQ6P3S1 775 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 CYB5D1Q6P9G0 228 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 LCLAT1Q6UWP7 414 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 SPATA21Q7Z572 469 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 APBB1IPQ7Z5R6 666 aaPredicted RBP6.92□□□□□ -1.3
DEFB1-201ENST00000297439 ZDHHC17Q8IUH5 632 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 ARFGAP1Q8N6T3 406 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 CFAP61Q8NHU2 1237 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 PPTC7Q8NI37 304 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 ACTL9Q8TC94 416 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 ELMO3Q96BJ8 720 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 DCPSQ96C86 337 aaKnown RBP6.92□□□□□ -1.3
DEFB1-201ENST00000297439 FAM84AQ96KN4 292 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 SPATA33Q96N06 139 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 MMP19Q99542 508 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 FHDC1Q9C0D6 1143 aaPredicted RBP6.92□□□□□ -1.3
DEFB1-201ENST00000297439 PDZD7Q9H5P4 517 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 ACSS3Q9H6R3 686 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 IFT122Q9HBG6 1241 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 RXFP1Q9HBX9 757 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 SLC40A1Q9NP59 571 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 PNPLA8Q9NP80 782 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 SAYSD1Q9NPB0 183 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 KLC4Q9NSK0 619 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 ASNSD1Q9NWL6 643 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.92□□□□□ -1.3
DEFB1-201ENST00000297439 PSMC3IPQ9P2W1 217 aaPredicted RBP6.92□□□□□ -1.3
DEFB1-201ENST00000297439 PNMA3Q9UL41 463 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 BARX2Q9UMQ3 279 aaPredicted RBP6.92□□□□□ -1.3
DEFB1-201ENST00000297439 USTQ9Y2C2 406 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 CLUHO75153 1309 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 ZNF236Q9UL36 1845 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 RALGAPA2Q2PPJ7 1873 aa6.92□□□□□ -1.3
DEFB1-201ENST00000297439 SMIM23A6NLE4 172 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 C2CD4BA6NLJ0 364 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 TCP11X1B4DZS4 312 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 RASA4BC9J798 803 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 PI4K2BG5E9Z4 385 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 INO80B-WBP1J3KQ70 363 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 GPR25O00155 361 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 NRG2O14511 850 aaPredicted RBP6.91□□□□□ -1.3
DEFB1-201ENST00000297439 MDM4O15151 490 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 TM9SF1O15321 606 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 CHADO15335 359 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 RASA4O43374 803 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 TYROBPO43914 113 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 HNRNPCL1O60812 293 aaKnown RBP6.91□□□□□ -1.3
DEFB1-201ENST00000297439 ATP5HO75947 161 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 ZWINTO95229 277 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 GH1P01241 217 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 LGALS2P05162 132 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 FAM163BP0C2L3 166 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 STAG3L1P0CL83 205 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 SRGAP2CP0DJJ0 459 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 CXCL8P10145 99 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 TXNP10599 105 aaKnown RBP6.91□□□□□ -1.3
DEFB1-201ENST00000297439 CETPP11597 493 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 HARSP12081 509 aaKnown RBP6.91□□□□□ -1.3
DEFB1-201ENST00000297439 KRT10P13645 584 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 ALADP13716 330 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 CCNB1P14635 433 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 TCF4P15884 667 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 ATF7P17544 494 aaPredicted RBP6.91□□□□□ -1.3
DEFB1-201ENST00000297439 TAC1P20366 129 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 TGM2P21980 687 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 IL1R2P27930 398 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 SLC8A1P32418 973 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 STX2P32856 288 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 GRM5P41594 1212 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 SSR1P43307 286 aaKnown RBP6.91□□□□□ -1.3
DEFB1-201ENST00000297439 RPL34P49207 117 aaKnown RBP6.91□□□□□ -1.3
DEFB1-201ENST00000297439 CTCFP49711 727 aaPredicted RBP6.91□□□□□ -1.3
DEFB1-201ENST00000297439 YARSP54577 528 aaKnown RBP6.91□□□□□ -1.3
DEFB1-201ENST00000297439 GEMIN4P57678 1058 aaKnown RBP6.91□□□□□ -1.3
DEFB1-201ENST00000297439 CCNA1P78396 465 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 RBP5P82980 135 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 OTUD4Q01804 1114 aaKnown RBP6.91□□□□□ -1.3
DEFB1-201ENST00000297439 BNIP1Q12981 228 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 MPP2Q14168 576 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 SPARCL1Q14515 664 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 NOMO1Q15155 1222 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 TRIP13Q15645 432 aaPredicted RBP6.91□□□□□ -1.3
DEFB1-201ENST00000297439 SKIDA1Q1XH10 827 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 SPRED3Q2MJR0 410 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 DCAF4L1Q3SXM0 396 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 ATP13A4Q4VNC1 1196 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 CCDC38Q502W7 563 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 PKDCCQ504Y2 493 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 SEZ6Q53EL9 994 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 BOLA3Q53S33 107 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 LDLRAD1Q5T700 205 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 FBXW10Q5XX13 1052 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 ARHGAP17Q68EM7 881 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 MAMDC4Q6UXC1 1216 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 GADL1Q6ZQY3 521 aa6.91□□□□□ -1.3
DEFB1-201ENST00000297439 USP50Q70EL3 339 aaPredicted RBP6.91□□□□□ -1.3
DEFB1-201ENST00000297439 ZBTB33Q86T24 672 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms