RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 NOVA2Q9UNW9 492 aaKnown RBP9.73□□□□□ -0.85
CLRN1-201ENST00000295911 ZNF148Q9UQR1 794 aa9.73□□□□□ -0.85
CLRN1-201ENST00000295911 LRRD1A4D1F6 860 aa9.72□□□□□ -0.85
CLRN1-201ENST00000295911 RNF223E7ERA6 249 aa9.72□□□□□ -0.85
CLRN1-201ENST00000295911 PI4K2BG5E9Z4 385 aa9.72□□□□□ -0.85
CLRN1-201ENST00000295911 RGS16O15492 202 aaPredicted RBP9.72□□□□□ -0.85
CLRN1-201ENST00000295911 AGTP01019 485 aa9.72□□□□□ -0.85
CLRN1-201ENST00000295911 MYL3P08590 195 aa9.72□□□□□ -0.85
CLRN1-201ENST00000295911 FGFR4P22455 802 aa9.72□□□□□ -0.85
CLRN1-201ENST00000295911 KLRC2P26717 231 aa9.72□□□□□ -0.85
CLRN1-201ENST00000295911 ATP5DP30049 168 aa9.72□□□□□ -0.85
CLRN1-201ENST00000295911 LSP1P33241 339 aa9.72□□□□□ -0.85
CLRN1-201ENST00000295911 ATP1A2P50993 1020 aa9.72□□□□□ -0.85
CLRN1-201ENST00000295911 ZNF143P52747 638 aaPredicted RBP9.72□□□□□ -0.85
CLRN1-201ENST00000295911 CRYBB1P53674 252 aaPredicted RBP9.72□□□□□ -0.85
CLRN1-201ENST00000295911 VCPP55072 806 aaKnown RBP9.72□□□□□ -0.85
CLRN1-201ENST00000295911 SLC25A11Q02978 314 aaKnown RBP9.72□□□□□ -0.85
CLRN1-201ENST00000295911 TAZQ16635 292 aa9.72□□□□□ -0.85
CLRN1-201ENST00000295911 ATP13A4Q4VNC1 1196 aa9.72□□□□□ -0.85
CLRN1-201ENST00000295911 PRAMEF19Q5SWL8 479 aa9.72□□□□□ -0.85
CLRN1-201ENST00000295911 KAZNQ674X7 775 aa9.72□□□□□ -0.85
CLRN1-201ENST00000295911 C17orf99Q6UX52 265 aa9.72□□□□□ -0.85
CLRN1-201ENST00000295911 PCGF5Q86SE9 256 aa9.72□□□□□ -0.85
CLRN1-201ENST00000295911 CCDC25Q86WR0 208 aa9.72□□□□□ -0.85
CLRN1-201ENST00000295911 RASAL3Q86YV0 1011 aa9.72□□□□□ -0.85
CLRN1-201ENST00000295911 ZDHHC17Q8IUH5 632 aa9.72□□□□□ -0.85
CLRN1-201ENST00000295911 CMASQ8NFW8 434 aaPredicted RBP9.72□□□□□ -0.85
CLRN1-201ENST00000295911 JOSD2Q8TAC2 188 aa9.72□□□□□ -0.85
CLRN1-201ENST00000295911 BCAS4Q8TDM0 211 aa9.72□□□□□ -0.85
CLRN1-201ENST00000295911 STK32AQ8WU08 396 aa9.72□□□□□ -0.85
CLRN1-201ENST00000295911 ZNF560Q96MR9 790 aa9.72□□□□□ -0.85
CLRN1-201ENST00000295911 OSMRQ99650 979 aa9.72□□□□□ -0.85
CLRN1-201ENST00000295911 APBA2Q99767 749 aa9.72□□□□□ -0.85
CLRN1-201ENST00000295911 CNPY3Q9BT09 278 aa9.72□□□□□ -0.85
CLRN1-201ENST00000295911 EPN3Q9H201 632 aa9.72□□□□□ -0.85
CLRN1-201ENST00000295911 ZFYVE28Q9HCC9 887 aa9.72□□□□□ -0.85
CLRN1-201ENST00000295911 METTL5Q9NRN9 209 aaKnown RBP9.72□□□□□ -0.85
CLRN1-201ENST00000295911 GINS2Q9Y248 185 aa9.72□□□□□ -0.85
CLRN1-201ENST00000295911 GRIN2DO15399 1336 aa9.71□□□□□ -0.85
CLRN1-201ENST00000295911 C17orf102A2RUQ5 167 aa9.71□□□□□ -0.86
CLRN1-201ENST00000295911 C3orf70A6NLC5 250 aaPredicted RBP9.71□□□□□ -0.86
CLRN1-201ENST00000295911 IGF2BP3O00425 579 aaKnown RBP eCLIP9.71□□□□□ -0.86
CLRN1-201ENST00000295911 RASGRF2O14827 1237 aa9.71□□□□□ -0.86
CLRN1-201ENST00000295911 LRCH4O75427 683 aa9.71□□□□□ -0.86
CLRN1-201ENST00000295911 TTC4O95801 387 aa9.71□□□□□ -0.86
CLRN1-201ENST00000295911 RPLP2P05387 115 aaKnown RBP9.71□□□□□ -0.86
CLRN1-201ENST00000295911 FAM163BP0C2L3 166 aa9.71□□□□□ -0.86
CLRN1-201ENST00000295911 KRT10P13645 584 aa9.71□□□□□ -0.86
CLRN1-201ENST00000295911 KCNE1P15382 129 aa9.71□□□□□ -0.86
CLRN1-201ENST00000295911 CYP3A5P20815 502 aa9.71□□□□□ -0.86
CLRN1-201ENST00000295911 GPD1P21695 349 aa9.71□□□□□ -0.86
CLRN1-201ENST00000295911 KDELR1P24390 212 aa9.71□□□□□ -0.86
CLRN1-201ENST00000295911 HPDP32754 393 aaPredicted RBP9.71□□□□□ -0.86
CLRN1-201ENST00000295911 MAGOHP61326 146 aaKnown RBP9.71□□□□□ -0.86
CLRN1-201ENST00000295911 TMEM62Q0P6H9 643 aa9.71□□□□□ -0.86
CLRN1-201ENST00000295911 SNX17Q15036 470 aa9.71□□□□□ -0.86
CLRN1-201ENST00000295911 PUS10Q3MIT2 529 aaKnown RBP9.71□□□□□ -0.86
CLRN1-201ENST00000295911 XKR4Q5GH76 650 aa9.71□□□□□ -0.86
CLRN1-201ENST00000295911 FAM102AQ5T9C2 384 aaPredicted RBP9.71□□□□□ -0.86
CLRN1-201ENST00000295911 IZUMO3Q5VZ72 239 aa9.71□□□□□ -0.86
CLRN1-201ENST00000295911 C9orf57Q5W0N0 161 aa9.71□□□□□ -0.86
CLRN1-201ENST00000295911 ARHGAP17Q68EM7 881 aa9.71□□□□□ -0.86
CLRN1-201ENST00000295911 MFSD5Q6N075 450 aa9.71□□□□□ -0.86
CLRN1-201ENST00000295911 HIBCHQ6NVY1 386 aaPredicted RBP9.71□□□□□ -0.86
CLRN1-201ENST00000295911 BBS12Q6ZW61 710 aa9.71□□□□□ -0.86
CLRN1-201ENST00000295911 B4GALNT4Q76KP1 1039 aa9.71□□□□□ -0.86
CLRN1-201ENST00000295911 TAOK1Q7L7X3 1001 aa9.71□□□□□ -0.86
CLRN1-201ENST00000295911 SPATS2Q86XZ4 545 aaKnown RBP9.71□□□□□ -0.86
CLRN1-201ENST00000295911 ALLCQ8N6M5 410 aa9.71□□□□□ -0.86
CLRN1-201ENST00000295911 KCTD6Q8NC69 237 aa9.71□□□□□ -0.86
CLRN1-201ENST00000295911 UBA3Q8TBC4 463 aa9.71□□□□□ -0.86
CLRN1-201ENST00000295911 DNAJB3Q8WWF6 145 aa9.71□□□□□ -0.86
CLRN1-201ENST00000295911 RAPGEF5Q92565 580 aa9.71□□□□□ -0.86
CLRN1-201ENST00000295911 CENPTQ96BT3 561 aa9.71□□□□□ -0.86
CLRN1-201ENST00000295911 SERPINB12Q96P63 405 aa9.71□□□□□ -0.86
CLRN1-201ENST00000295911 CCDC77Q9BR77 488 aa9.71□□□□□ -0.86
CLRN1-201ENST00000295911 EIF2AQ9BY44 585 aaKnown RBP9.71□□□□□ -0.86
CLRN1-201ENST00000295911 FAM107BQ9H098 131 aa9.71□□□□□ -0.86
CLRN1-201ENST00000295911 RSAD1Q9HA92 442 aa9.71□□□□□ -0.86
CLRN1-201ENST00000295911 CYLDQ9NQC7 956 aa9.71□□□□□ -0.86
CLRN1-201ENST00000295911 FLRT1Q9NZU1 646 aa9.71□□□□□ -0.86
CLRN1-201ENST00000295911 HESX1Q9UBX0 185 aa9.71□□□□□ -0.86
CLRN1-201ENST00000295911 HMGXB4Q9UGU5 601 aa9.71□□□□□ -0.86
CLRN1-201ENST00000295911 TSPAN16Q9UKR8 245 aa9.71□□□□□ -0.86
CLRN1-201ENST00000295911 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.71□□□□□ -0.86
CLRN1-201ENST00000295911 SNX9Q9Y5X1 595 aa9.71□□□□□ -0.86
CLRN1-201ENST00000295911 TLDC2A0PJX2 215 aa9.7□□□□□ -0.86
CLRN1-201ENST00000295911 EBAG9O00559 213 aa9.7□□□□□ -0.86
CLRN1-201ENST00000295911 PIRO00625 290 aa9.7□□□□□ -0.86
CLRN1-201ENST00000295911 DNALI1O14645 258 aaPredicted RBP9.7□□□□□ -0.86
CLRN1-201ENST00000295911 TP73O15350 636 aa9.7□□□□□ -0.86
CLRN1-201ENST00000295911 CAND2O75155 1236 aa9.7□□□□□ -0.86
CLRN1-201ENST00000295911 TCEA3O75764 348 aa9.7□□□□□ -0.86
CLRN1-201ENST00000295911 RECQL4O94761 1208 aa9.7□□□□□ -0.86
CLRN1-201ENST00000295911 TRUB2O95900 331 aaKnown RBP9.7□□□□□ -0.86
CLRN1-201ENST00000295911 IGHA2P01877 340 aa9.7□□□□□ -0.86
CLRN1-201ENST00000295911 SHBGP04278 402 aa9.7□□□□□ -0.86
CLRN1-201ENST00000295911 TCF4P15884 667 aa9.7□□□□□ -0.86
CLRN1-201ENST00000295911 CYP2B6P20813 491 aa9.7□□□□□ -0.86
CLRN1-201ENST00000295911 HOXC8P31273 242 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms