RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 CLASP2O75122 1294 aaKnown RBP16.01■□□□□ 0.15
CCDC140-201ENST00000295226 GABBR2O75899 941 aa16.01■□□□□ 0.15
CCDC140-201ENST00000295226 ADH1AP07327 375 aa16.01■□□□□ 0.15
CCDC140-201ENST00000295226 UNGP13051 313 aaPredicted RBP16.01■□□□□ 0.15
CCDC140-201ENST00000295226 ATF2P15336 505 aa16.01■□□□□ 0.15
CCDC140-201ENST00000295226 NPR3P17342 541 aa16.01■□□□□ 0.15
CCDC140-201ENST00000295226 BCAT1P54687 386 aa16.01■□□□□ 0.15
CCDC140-201ENST00000295226 NOMO3P69849 1222 aa16.01■□□□□ 0.15
CCDC140-201ENST00000295226 CREMQ03060 361 aa16.01■□□□□ 0.15
CCDC140-201ENST00000295226 BST2Q10589 180 aaKnown RBP16.01■□□□□ 0.15
CCDC140-201ENST00000295226 STILQ15468 1287 aa16.01■□□□□ 0.15
CCDC140-201ENST00000295226 CCDC122Q5T0U0 273 aa16.01■□□□□ 0.15
CCDC140-201ENST00000295226 LILRA6Q6PI73 481 aa16.01■□□□□ 0.15
CCDC140-201ENST00000295226 TOGARAM2Q6ZUX3 1019 aa16.01■□□□□ 0.15
CCDC140-201ENST00000295226 VPS36Q86VN1 386 aa16.01■□□□□ 0.15
CCDC140-201ENST00000295226 ACRBPQ8NEB7 543 aa16.01■□□□□ 0.15
CCDC140-201ENST00000295226 SLC35F5Q8WV83 523 aa16.01■□□□□ 0.15
CCDC140-201ENST00000295226 LHX5Q9H2C1 402 aa16.01■□□□□ 0.15
CCDC140-201ENST00000295226 NAGPAQ9UK23 515 aa16.01■□□□□ 0.15
CCDC140-201ENST00000295226 TFR2Q9UP52 801 aa16.01■□□□□ 0.15
CCDC140-201ENST00000295226 NDUFA10O95299 355 aa16■□□□□ 0.15
CCDC140-201ENST00000295226 HAPLN1P10915 354 aaPredicted RBP16■□□□□ 0.15
CCDC140-201ENST00000295226 NRIP1P48552 1158 aa16■□□□□ 0.15
CCDC140-201ENST00000295226 SLC18A3Q16572 532 aa16■□□□□ 0.15
CCDC140-201ENST00000295226 CFAP221Q4G0U5 840 aa16■□□□□ 0.15
CCDC140-201ENST00000295226 TPGS2Q68CL5 300 aa16■□□□□ 0.15
CCDC140-201ENST00000295226 SMYD5Q6GMV2 418 aa16■□□□□ 0.15
CCDC140-201ENST00000295226 LLGL2Q6P1M3 1020 aa16■□□□□ 0.15
CCDC140-201ENST00000295226 ALKBH5Q6P6C2 394 aaKnown RBP16■□□□□ 0.15
CCDC140-201ENST00000295226 GPRIN1Q7Z2K8 1008 aa16■□□□□ 0.15
CCDC140-201ENST00000295226 TMEM35BQ8NCS4 154 aa16■□□□□ 0.15
CCDC140-201ENST00000295226 GIPC2Q8TF65 315 aa16■□□□□ 0.15
CCDC140-201ENST00000295226 MRPL38Q96DV4 380 aaKnown RBP16■□□□□ 0.15
CCDC140-201ENST00000295226 LMAN2LQ9H0V9 348 aa16■□□□□ 0.15
CCDC140-201ENST00000295226 TLE6Q9H808 572 aa16■□□□□ 0.15
CCDC140-201ENST00000295226 ST7Q9NRC1 585 aa16■□□□□ 0.15
CCDC140-201ENST00000295226 PRRC2BQ5JSZ5 2229 aaKnown RBP16■□□□□ 0.15
CCDC140-201ENST00000295226 PRRG1O14668 218 aa15.99■□□□□ 0.15
CCDC140-201ENST00000295226 FTLP02792 175 aaPredicted RBP15.99■□□□□ 0.15
CCDC140-201ENST00000295226 EPCAMP16422 314 aa15.99■□□□□ 0.15
CCDC140-201ENST00000295226 CLCN4P51793 760 aa15.99■□□□□ 0.15
CCDC140-201ENST00000295226 CYP4A22Q5TCH4 519 aa15.99■□□□□ 0.15
CCDC140-201ENST00000295226 ACAD10Q6JQN1 1059 aa15.99■□□□□ 0.15
CCDC140-201ENST00000295226 PDE12Q6L8Q7 609 aaKnown RBP15.99■□□□□ 0.15
CCDC140-201ENST00000295226 PIGZQ86VD9 579 aa15.99■□□□□ 0.15
CCDC140-201ENST00000295226 CCDC170Q8IYT3 715 aa15.99■□□□□ 0.15
CCDC140-201ENST00000295226 KIF18AQ8NI77 898 aa15.99■□□□□ 0.15
CCDC140-201ENST00000295226 SPPL2BQ8TCT7 592 aa15.99■□□□□ 0.15
CCDC140-201ENST00000295226 NDRG1Q92597 394 aaKnown RBP15.99■□□□□ 0.15
CCDC140-201ENST00000295226 FUBP3Q96I24 572 aaKnown RBP eCLIP15.99■□□□□ 0.15
CCDC140-201ENST00000295226 CPXM1Q96SM3 734 aa15.99■□□□□ 0.15
CCDC140-201ENST00000295226 PACSIN1Q9BY11 444 aa15.99■□□□□ 0.15
CCDC140-201ENST00000295226 IGFLR1Q9H665 355 aa15.99■□□□□ 0.15
CCDC140-201ENST00000295226 CSNK1G1Q9HCP0 422 aa15.99■□□□□ 0.15
CCDC140-201ENST00000295226 CHORDC1Q9UHD1 332 aaPredicted RBP15.99■□□□□ 0.15
CCDC140-201ENST00000295226 REXO2Q9Y3B8 237 aaKnown RBP15.99■□□□□ 0.15
CCDC140-201ENST00000295226 CEP83Q9Y592 693 aa15.99■□□□□ 0.15
CCDC140-201ENST00000295226 ATP8B3O60423 1300 aa15.99■□□□□ 0.15
CCDC140-201ENST00000295226 A0A0U1RQJ8 604 aa15.99■□□□□ 0.15
CCDC140-201ENST00000295226 HHLA1C9JL84 531 aa15.99■□□□□ 0.15
CCDC140-201ENST00000295226 GLUD1P00367 558 aa15.99■□□□□ 0.15
CCDC140-201ENST00000295226 LCP1P13796 627 aa15.99■□□□□ 0.15
CCDC140-201ENST00000295226 ELF1P32519 619 aa15.99■□□□□ 0.15
CCDC140-201ENST00000295226 CDH5P33151 784 aaPredicted RBP15.99■□□□□ 0.15
CCDC140-201ENST00000295226 CYLC1P35663 651 aaPredicted RBP15.99■□□□□ 0.15
CCDC140-201ENST00000295226 SMARCB1Q12824 385 aa15.99■□□□□ 0.15
CCDC140-201ENST00000295226 IFRD2Q12894 506 aaPredicted RBP15.99■□□□□ 0.15
CCDC140-201ENST00000295226 PDCLQ13371 301 aa15.99■□□□□ 0.15
CCDC140-201ENST00000295226 ADGRE1Q14246 886 aa15.99■□□□□ 0.15
CCDC140-201ENST00000295226 PTPROQ16827 1216 aa15.99■□□□□ 0.15
CCDC140-201ENST00000295226 PTPN20Q4JDL3 420 aa15.99■□□□□ 0.15
CCDC140-201ENST00000295226 TRIM72Q6ZMU5 477 aa15.99■□□□□ 0.15
CCDC140-201ENST00000295226 MMS22LQ6ZRQ5 1243 aa15.99■□□□□ 0.15
CCDC140-201ENST00000295226 KREMEN2Q8NCW0 462 aa15.99■□□□□ 0.15
CCDC140-201ENST00000295226 SCAMP5Q8TAC9 235 aa15.99■□□□□ 0.15
CCDC140-201ENST00000295226 FEZF2Q8TBJ5 459 aa15.99■□□□□ 0.15
CCDC140-201ENST00000295226 ATRIPQ8WXE1 791 aa15.99■□□□□ 0.15
CCDC140-201ENST00000295226 C11orf70Q9BRQ4 267 aa15.99■□□□□ 0.15
CCDC140-201ENST00000295226 ABCB6Q9NP58 842 aa15.99■□□□□ 0.15
CCDC140-201ENST00000295226 DMAP1Q9NPF5 467 aaPredicted RBP15.99■□□□□ 0.15
CCDC140-201ENST00000295226 NENFQ9UMX5 172 aa15.99■□□□□ 0.15
CCDC140-201ENST00000295226 XPO1O14980 1071 aaKnown RBP15.98■□□□□ 0.15
CCDC140-201ENST00000295226 LSM8O95777 96 aaKnown RBP15.98■□□□□ 0.15
CCDC140-201ENST00000295226 ERBB2P04626 1255 aa15.98■□□□□ 0.15
CCDC140-201ENST00000295226 SETSIPP0DME0 302 aa15.98■□□□□ 0.15
CCDC140-201ENST00000295226 ATF6P18850 670 aa15.98■□□□□ 0.15
CCDC140-201ENST00000295226 ABCB4P21439 1286 aa15.98■□□□□ 0.15
CCDC140-201ENST00000295226 MAGEA11P43364 429 aa15.98■□□□□ 0.15
CCDC140-201ENST00000295226 NSFP46459 744 aaKnown RBP15.98■□□□□ 0.15
CCDC140-201ENST00000295226 MTMR3Q13615 1198 aa15.98■□□□□ 0.15
CCDC140-201ENST00000295226 ZNF697Q5TEC3 545 aa15.98■□□□□ 0.15
CCDC140-201ENST00000295226 Q7L0L9 218 aa15.98■□□□□ 0.15
CCDC140-201ENST00000295226 ERICH1Q86X53 443 aa15.98■□□□□ 0.15
CCDC140-201ENST00000295226 SLC7A14Q8TBB6 771 aa15.98■□□□□ 0.15
CCDC140-201ENST00000295226 C2orf15Q8WU43 125 aaKnown RBP15.98■□□□□ 0.15
CCDC140-201ENST00000295226 SLC22A17Q8WUG5 538 aa15.98■□□□□ 0.15
CCDC140-201ENST00000295226 PPP1R13BQ96KQ4 1090 aa15.98■□□□□ 0.15
CCDC140-201ENST00000295226 MIS12Q9H081 205 aa15.98■□□□□ 0.15
CCDC140-201ENST00000295226 EIF3CLB5ME19 914 aaKnown RBP15.97■□□□□ 0.15
CCDC140-201ENST00000295226 E5RJQ4 531 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms