RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 POLNQ7Z5Q5 900 aa9.62□□□□□ -0.87
PDPN-201ENST00000294489 ATG4AQ8WYN0 398 aa9.62□□□□□ -0.87
PDPN-201ENST00000294489 ARL8AQ96BM9 186 aa9.62□□□□□ -0.87
PDPN-201ENST00000294489 ZFP42Q96MM3 310 aa9.62□□□□□ -0.87
PDPN-201ENST00000294489 SLC4A5Q9BY07 1137 aa9.62□□□□□ -0.87
PDPN-201ENST00000294489 DNAI2Q9GZS0 605 aa9.62□□□□□ -0.87
PDPN-201ENST00000294489 NLRC5Q86WI3 1866 aa9.62□□□□□ -0.87
PDPN-201ENST00000294489 PTPRDP23468 1912 aa9.62□□□□□ -0.87
PDPN-201ENST00000294489 KRT7P08729 469 aa9.62□□□□□ -0.87
PDPN-201ENST00000294489 GHRP10912 638 aa9.62□□□□□ -0.87
PDPN-201ENST00000294489 EIF3BP55884 814 aaKnown RBP9.62□□□□□ -0.87
PDPN-201ENST00000294489 HTRA3P83110 453 aa9.62□□□□□ -0.87
PDPN-201ENST00000294489 LMNB2Q03252 620 aa9.62□□□□□ -0.87
PDPN-201ENST00000294489 SLMAPQ14BN4 828 aa9.62□□□□□ -0.87
PDPN-201ENST00000294489 TTMPQ5BVD1 217 aa9.62□□□□□ -0.87
PDPN-201ENST00000294489 SLC35F5Q8WV83 523 aa9.62□□□□□ -0.87
PDPN-201ENST00000294489 SLITRK1Q96PX8 696 aa9.62□□□□□ -0.87
PDPN-201ENST00000294489 HERPUD2Q9BSE4 406 aa9.62□□□□□ -0.87
PDPN-201ENST00000294489 TRPV6Q9H1D0 765 aa9.62□□□□□ -0.87
PDPN-201ENST00000294489 GOLGA2P5Q9HBQ8 144 aa9.62□□□□□ -0.87
PDPN-201ENST00000294489 METTL5Q9NRN9 209 aaKnown RBP9.62□□□□□ -0.87
PDPN-201ENST00000294489 WHRNQ9P202 907 aa9.62□□□□□ -0.87
PDPN-201ENST00000294489 TSPAN16Q9UKR8 245 aa9.62□□□□□ -0.87
PDPN-201ENST00000294489 OGDHLQ9ULD0 1010 aa9.62□□□□□ -0.87
PDPN-201ENST00000294489 HMGB1P1B2RPK0 211 aaPredicted RBP9.61□□□□□ -0.87
PDPN-201ENST00000294489 PI4K2BG5E9Z4 385 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 RNF8O76064 485 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 THP07101 528 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 ITIH2P19823 946 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 PTPN7P35236 360 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 MLH1P40692 756 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 PMS2P54278 862 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 SNX16P57768 344 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 IFFO1Q0D2I5 559 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 ACAP1Q15027 740 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 ATP13A4Q4VNC1 1196 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 PPP1R26Q5T8A7 1209 aaPredicted RBP9.61□□□□□ -0.87
PDPN-201ENST00000294489 KAZNQ674X7 775 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 CD300LGQ6UXG3 332 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 LEKR1Q6ZMV7 388 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 ZNF365Q70YC5 407 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 TMEM110Q86TL2 294 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 TTC30AQ86WT1 665 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 ECHDC2Q86YB7 292 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 UBA3Q8TBC4 463 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 ART4Q93070 314 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 TSPYL2Q9H2G4 693 aaPredicted RBP9.61□□□□□ -0.87
PDPN-201ENST00000294489 KLHL11Q9NVR0 708 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 TJP2Q9UDY2 1190 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 LRRD1A4D1F6 860 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 C9IYK1 514 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 TCF4P15884 667 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 SCNN1AP37088 669 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 PTK6Q13882 451 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 UPP1Q16831 310 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 GOLGA7BQ2TAP0 167 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 TFDP3Q5H9I0 405 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 FAM102AQ5T9C2 384 aaPredicted RBP9.61□□□□□ -0.87
PDPN-201ENST00000294489 RTN4RL1Q86UN2 441 aaPredicted RBP9.61□□□□□ -0.87
PDPN-201ENST00000294489 FAM126BQ8IXS8 530 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 CCDC89Q8N998 374 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 APPL2Q8NEU8 664 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 JOSD2Q8TAC2 188 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 PGBD4Q96DM1 585 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 ATP6V1G3Q96LB4 118 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 GAD1Q99259 594 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 TXLNGYQ9BZA5 131 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 TSPYL1Q9H0U9 437 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 PABPC3Q9H361 631 aaKnown RBP9.61□□□□□ -0.87
PDPN-201ENST00000294489 STARD7Q9NQZ5 370 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 RNF19AQ9NV58 838 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 HESX1Q9UBX0 185 aa9.61□□□□□ -0.87
PDPN-201ENST00000294489 R3HDM2Q9Y2K5 976 aaKnown RBP9.61□□□□□ -0.87
PDPN-201ENST00000294489 A6NNZ2 444 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 H0YGN5 161 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 GABBR2O75899 941 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 EOMESO95936 686 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 ATF2P15336 505 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 GNL1P36915 607 aaPredicted RBP9.6□□□□□ -0.87
PDPN-201ENST00000294489 AFF1P51825 1210 aaKnown RBP9.6□□□□□ -0.87
PDPN-201ENST00000294489 CAV1Q03135 178 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 GPNMBQ14956 572 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 TUBB8Q3ZCM7 444 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 KCTD16Q68DU8 428 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 MFSD7Q6UXD7 560 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 SPOCD1Q6ZMY3 1216 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 ARCQ7LC44 396 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 GSTA5Q7RTV2 222 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 ACOT1Q86TX2 421 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 OSTM1Q86WC4 334 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 C12orf29Q8N999 325 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 BBOF1Q8ND07 529 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 OR6B3Q8NGW1 331 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 LINC01599Q8WXQ3 324 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 LPPQ93052 612 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 SNF8Q96H20 258 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 UROC1Q96N76 676 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 ADAM2Q99965 735 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 CENPHQ9H3R5 247 aa9.6□□□□□ -0.87
PDPN-201ENST00000294489 DPEP3Q9H4B8 488 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms