RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 CNTN3Q9P232 1028 aa20.24■□□□□ 0.83
BRAF-201ENST00000288602 RRP15Q9Y3B9 282 aaKnown RBP20.24■□□□□ 0.83
BRAF-201ENST00000288602 C2CD4BA6NLJ0 364 aa20.23■□□□□ 0.83
BRAF-201ENST00000288602 A8MXQ7 604 aa20.23■□□□□ 0.83
BRAF-201ENST00000288602 HAS3O00219 553 aa20.23■□□□□ 0.83
BRAF-201ENST00000288602 GABBR2O75899 941 aa20.23■□□□□ 0.83
BRAF-201ENST00000288602 GPD1P21695 349 aa20.23■□□□□ 0.83
BRAF-201ENST00000288602 CPT1AP50416 773 aa20.23■□□□□ 0.83
BRAF-201ENST00000288602 ZNF143P52747 638 aaPredicted RBP20.23■□□□□ 0.83
BRAF-201ENST00000288602 SOX4Q06945 474 aaPredicted RBP20.23■□□□□ 0.83
BRAF-201ENST00000288602 CYP4F22Q6NT55 531 aa20.23■□□□□ 0.83
BRAF-201ENST00000288602 DRICH1Q6PGQ1 229 aaPredicted RBP20.23■□□□□ 0.83
BRAF-201ENST00000288602 USP6NLQ92738 828 aa20.23■□□□□ 0.83
BRAF-201ENST00000288602 RBM15Q96T37 977 aaKnown RBP eCLIP20.23■□□□□ 0.83
BRAF-201ENST00000288602 ASNSD1Q9NWL6 643 aa20.23■□□□□ 0.83
BRAF-201ENST00000288602 GOLGA8MH3BSY2 632 aa20.22■□□□□ 0.83
BRAF-201ENST00000288602 DNALI1O14645 258 aaPredicted RBP20.22■□□□□ 0.83
BRAF-201ENST00000288602 CCDC130P13994 396 aa20.22■□□□□ 0.83
BRAF-201ENST00000288602 PECAM1P16284 738 aaPredicted RBP20.22■□□□□ 0.83
BRAF-201ENST00000288602 C17orf99Q6UX52 265 aa20.22■□□□□ 0.83
BRAF-201ENST00000288602 SRLQ86TD4 932 aa20.22■□□□□ 0.83
BRAF-201ENST00000288602 ARRDC4Q8NCT1 418 aa20.22■□□□□ 0.83
BRAF-201ENST00000288602 SLC35B2Q8TB61 432 aa20.22■□□□□ 0.83
BRAF-201ENST00000288602 MYCBPAPQ8TBZ2 947 aa20.22■□□□□ 0.83
BRAF-201ENST00000288602 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.22■□□□□ 0.83
BRAF-201ENST00000288602 DERAQ9Y315 318 aa20.22■□□□□ 0.83
BRAF-201ENST00000288602 FGFR1P11362 822 aa20.22■□□□□ 0.83
BRAF-201ENST00000288602 CHN1P15882 459 aa20.22■□□□□ 0.83
BRAF-201ENST00000288602 IGFBP6P24592 240 aaPredicted RBP20.22■□□□□ 0.83
BRAF-201ENST00000288602 ADORA2BP29275 332 aa20.22■□□□□ 0.83
BRAF-201ENST00000288602 CTGFP29279 349 aa20.22■□□□□ 0.83
BRAF-201ENST00000288602 CDC42EP1Q00587 391 aa20.22■□□□□ 0.83
BRAF-201ENST00000288602 FASTKD3Q14CZ7 662 aaKnown RBP20.22■□□□□ 0.83
BRAF-201ENST00000288602 UBXN11Q5T124 520 aa20.22■□□□□ 0.83
BRAF-201ENST00000288602 SCYL2Q6P3W7 929 aa20.22■□□□□ 0.83
BRAF-201ENST00000288602 NPNTQ6UXI9 565 aa20.22■□□□□ 0.83
BRAF-201ENST00000288602 CYP4V2Q6ZWL3 525 aaPredicted RBP20.22■□□□□ 0.83
BRAF-201ENST00000288602 APBB1IPQ7Z5R6 666 aaPredicted RBP20.22■□□□□ 0.83
BRAF-201ENST00000288602 ZNF473Q8WTR7 871 aaKnown RBP20.22■□□□□ 0.83
BRAF-201ENST00000288602 CLEC4CQ8WTT0 213 aa20.22■□□□□ 0.83
BRAF-201ENST00000288602 GPATCH2LQ9NWQ4 482 aa20.22■□□□□ 0.83
BRAF-201ENST00000288602 CACNG4Q9UBN1 327 aa20.22■□□□□ 0.83
BRAF-201ENST00000288602 TBK1Q9UHD2 729 aa20.22■□□□□ 0.83
BRAF-201ENST00000288602 DRG1Q9Y295 367 aaKnown RBP20.22■□□□□ 0.83
BRAF-201ENST00000288602 ZNF236Q9UL36 1845 aa20.22■□□□□ 0.83
BRAF-201ENST00000288602 C17orf102A2RUQ5 167 aa20.21■□□□□ 0.83
BRAF-201ENST00000288602 EBAG9O00559 213 aa20.21■□□□□ 0.83
BRAF-201ENST00000288602 CREB1P16220 341 aa20.21■□□□□ 0.83
BRAF-201ENST00000288602 GAD2Q05329 585 aa20.21■□□□□ 0.83
BRAF-201ENST00000288602 MTM1Q13496 603 aa20.21■□□□□ 0.83
BRAF-201ENST00000288602 FSCN1Q16658 493 aaKnown RBP20.21■□□□□ 0.83
BRAF-201ENST00000288602 CCDC14Q49A88 953 aa20.21■□□□□ 0.83
BRAF-201ENST00000288602 PKDCCQ504Y2 493 aa20.21■□□□□ 0.83
BRAF-201ENST00000288602 CAPN12Q6ZSI9 719 aa20.21■□□□□ 0.83
BRAF-201ENST00000288602 BBOF1Q8ND07 529 aa20.21■□□□□ 0.83
BRAF-201ENST00000288602 NKD2Q969F2 451 aaPredicted RBP20.21■□□□□ 0.83
BRAF-201ENST00000288602 TMEM109Q9BVC6 243 aa20.21■□□□□ 0.83
BRAF-201ENST00000288602 KIAA1257Q9ULG3 409 aa20.21■□□□□ 0.83
BRAF-201ENST00000288602 TNPO2O14787 897 aaKnown RBP20.21■□□□□ 0.83
BRAF-201ENST00000288602 BANF1O75531 89 aa20.21■□□□□ 0.83
BRAF-201ENST00000288602 ITGAVP06756 1048 aa20.21■□□□□ 0.83
BRAF-201ENST00000288602 CDH6P55285 790 aa20.21■□□□□ 0.83
BRAF-201ENST00000288602 CCDC142Q17RM4 750 aa20.21■□□□□ 0.83
BRAF-201ENST00000288602 FBXO47Q5MNV8 452 aa20.21■□□□□ 0.83
BRAF-201ENST00000288602 CMASQ8NFW8 434 aaPredicted RBP20.21■□□□□ 0.83
BRAF-201ENST00000288602 KBTBD7Q8WVZ9 684 aa20.21■□□□□ 0.83
BRAF-201ENST00000288602 SAYSD1Q9NPB0 183 aa20.21■□□□□ 0.83
BRAF-201ENST00000288602 TPX2Q9ULW0 747 aaKnown RBP20.21■□□□□ 0.83
BRAF-201ENST00000288602 UBQLN1Q9UMX0 589 aaKnown RBP20.21■□□□□ 0.83
BRAF-201ENST00000288602 IPPQ9Y573 584 aa20.21■□□□□ 0.83
BRAF-201ENST00000288602 HTTP42858 3142 aa20.21■□□□□ 0.83
BRAF-201ENST00000288602 RALGAPA2Q2PPJ7 1873 aa20.21■□□□□ 0.83
BRAF-201ENST00000288602 AGTP01019 485 aa20.2■□□□□ 0.82
BRAF-201ENST00000288602 C6orf222P0C671 652 aaPredicted RBP20.2■□□□□ 0.82
BRAF-201ENST00000288602 TFE3P19532 575 aaPredicted RBP20.2■□□□□ 0.82
BRAF-201ENST00000288602 MMP13P45452 471 aa20.2■□□□□ 0.82
BRAF-201ENST00000288602 OLFML1Q6UWY5 402 aa20.2■□□□□ 0.82
BRAF-201ENST00000288602 BBS12Q6ZW61 710 aa20.2■□□□□ 0.82
BRAF-201ENST00000288602 IFNL1Q8IU54 200 aa20.2■□□□□ 0.82
BRAF-201ENST00000288602 ZCCHC9Q8N567 271 aaKnown RBP20.2■□□□□ 0.82
BRAF-201ENST00000288602 LRRC52Q8N7C0 313 aa20.2■□□□□ 0.82
BRAF-201ENST00000288602 SLC35F5Q8WV83 523 aa20.2■□□□□ 0.82
BRAF-201ENST00000288602 CNPY3Q9BT09 278 aa20.2■□□□□ 0.82
BRAF-201ENST00000288602 NGRNQ9NPE2 291 aaKnown RBP20.2■□□□□ 0.82
BRAF-201ENST00000288602 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.2■□□□□ 0.82
BRAF-201ENST00000288602 MANSC4A6NHS7 340 aaPredicted RBP20.2■□□□□ 0.82
BRAF-201ENST00000288602 PAPSS1O43252 624 aaPredicted RBP20.2■□□□□ 0.82
BRAF-201ENST00000288602 TRAPPC3O43617 180 aa20.2■□□□□ 0.82
BRAF-201ENST00000288602 RGS2P41220 211 aa20.2■□□□□ 0.82
BRAF-201ENST00000288602 MAGEA4P43358 317 aa20.2■□□□□ 0.82
BRAF-201ENST00000288602 PURAQ00577 322 aaKnown RBP20.2■□□□□ 0.82
BRAF-201ENST00000288602 EXOC3L1Q86VI1 746 aa20.2■□□□□ 0.82
BRAF-201ENST00000288602 UNC45BQ8IWX7 931 aa20.2■□□□□ 0.82
BRAF-201ENST00000288602 TTC39CQ8N584 583 aa20.2■□□□□ 0.82
BRAF-201ENST00000288602 SMG8Q8ND04 991 aaKnown RBP20.2■□□□□ 0.82
BRAF-201ENST00000288602 KHSRPQ92945 711 aaKnown RBP eCLIP20.2■□□□□ 0.821e-6■■■■□ 24
BRAF-201ENST00000288602 TSPYL1Q9H0U9 437 aa20.2■□□□□ 0.82
BRAF-201ENST00000288602 GMNCA6NCL1 334 aa20.19■□□□□ 0.82
BRAF-201ENST00000288602 MEIS3P2A8K0S8 358 aa20.19■□□□□ 0.82
BRAF-201ENST00000288602 KPNA7A9QM74 516 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms