RNA–Protein interactions for RNA: ENST00000284273.5

UBASH3B-201, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBASH3B, Length 6,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-201ENST00000284273 IL1RAPL1Q9NZN1 696 aa12.31□□□□□ -0.44
UBASH3B-201ENST00000284273 DYRK1BQ9Y463 629 aa12.31□□□□□ -0.44
UBASH3B-201ENST00000284273 SYNMO15061 1565 aa12.31□□□□□ -0.44
UBASH3B-201ENST00000284273 NRKQ7Z2Y5 1582 aa12.31□□□□□ -0.44
UBASH3B-201ENST00000284273 TPST1O60507 370 aa12.31□□□□□ -0.44
UBASH3B-201ENST00000284273 SGPL1O95470 568 aa12.31□□□□□ -0.44
UBASH3B-201ENST00000284273 GALCP54803 685 aa12.31□□□□□ -0.44
UBASH3B-201ENST00000284273 MFSD10Q14728 455 aa12.31□□□□□ -0.44
UBASH3B-201ENST00000284273 SHROOM1Q2M3G4 852 aaPredicted RBP12.31□□□□□ -0.44
UBASH3B-201ENST00000284273 EFHC1Q5JVL4 640 aa12.31□□□□□ -0.44
UBASH3B-201ENST00000284273 CAPRIN2Q6IMN6 1127 aaKnown RBP12.31□□□□□ -0.44
UBASH3B-201ENST00000284273 CHURC1-FNTBB4DL54 471 aa12.31□□□□□ -0.44
UBASH3B-201ENST00000284273 POLBP06746 335 aa12.31□□□□□ -0.44
UBASH3B-201ENST00000284273 SKIP12755 728 aa12.31□□□□□ -0.44
UBASH3B-201ENST00000284273 MSH3P20585 1137 aa12.31□□□□□ -0.44
UBASH3B-201ENST00000284273 RPS12P25398 132 aaKnown RBP12.31□□□□□ -0.44
UBASH3B-201ENST00000284273 GSSP48637 474 aa12.31□□□□□ -0.44
UBASH3B-201ENST00000284273 SCARA3Q6AZY7 606 aa12.31□□□□□ -0.44
UBASH3B-201ENST00000284273 HHIPL2Q6UWX4 724 aa12.31□□□□□ -0.44
UBASH3B-201ENST00000284273 NR2E3Q9Y5X4 410 aa12.31□□□□□ -0.44
UBASH3B-201ENST00000284273 IFRD1O00458 451 aaPredicted RBP12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 IL1R1P14778 569 aa12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 GRK3P35626 688 aa12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 ACADSBP45954 432 aa12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 TRIM69Q86WT6 500 aa12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 PCDHB9Q9Y5E1 797 aa12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 CPSF1Q10570 1443 aaKnown RBP12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 LOC100653049A0A140TA62 436 aa12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 SCAMP1O15126 338 aa12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 KDM1AO60341 852 aa12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 KRT34O76011 436 aa12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 TPH1P17752 444 aa12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 MAPRE1Q15691 268 aaKnown RBP12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 CENPPQ6IPU0 288 aa12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 CES5AQ6NT32 575 aa12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 TRIM65Q6PJ69 517 aa12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 GATAD2AQ86YP4 633 aa12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 TEX9Q8N6V9 391 aa12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 CYFIP2Q96F07 1278 aa12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 MTG1Q9BT17 334 aaPredicted RBP12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 ZNF200P98182 395 aaPredicted RBP12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 ATP2C1P98194 919 aaPredicted RBP12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 HMGB1P1B2RPK0 211 aaPredicted RBP12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 NT5C1B-RDH14C9J2C7 533 aa12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 LTFP02788 710 aa12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 GRIN1Q05586 938 aa12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 MED21Q13503 144 aa12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 PIGHQ14442 188 aaPredicted RBP12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 PDK1Q15118 436 aa12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 KYNUQ16719 465 aa12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 PLPP4Q5VZY2 271 aa12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 RNF168Q8IYW5 571 aaPredicted RBP12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 GTF3C2Q8WUA4 911 aaPredicted RBP12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 RFFLQ8WZ73 363 aa12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 CCDC130P13994 396 aa12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 SKIV2L2P42285 1042 aaKnown RBP12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 AP2B1P63010 937 aa12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 SRSF11Q05519 484 aaKnown RBP12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 GABPB1Q06547 395 aaPredicted RBP12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 PRKAA1Q13131 559 aa12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 MTHFD1LQ6UB35 978 aa12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 BTN2A1Q7KYR7 527 aa12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 SPATA31A5Q5VU36 1347 aa12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 SPATA31A7Q8IWB4 1347 aa12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 IGSF9BQ9UPX0 1349 aa12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 ERI2A8K979 691 aaKnown RBP12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 MYO1CO00159 1063 aa12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 SUPT20HL2P0C7V6 817 aa12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 TGM2P21980 687 aa12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 ACTN3Q08043 901 aaPredicted RBP12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 CLYBLQ8N0X4 340 aa12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 COL26A1Q96A83 441 aa12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 DDX28Q9NUL7 540 aaKnown RBP12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 SPG21Q9NZD8 308 aa12.3□□□□□ -0.44
UBASH3B-201ENST00000284273 PSMD3O43242 534 aa12.29□□□□□ -0.44
UBASH3B-201ENST00000284273 TLL1O43897 1013 aa12.29□□□□□ -0.44
UBASH3B-201ENST00000284273 CNTN1Q12860 1018 aa12.29□□□□□ -0.44
UBASH3B-201ENST00000284273 CXCL17Q6UXB2 119 aa12.29□□□□□ -0.44
UBASH3B-201ENST00000284273 MMGT1Q8N4V1 131 aa12.29□□□□□ -0.44
UBASH3B-201ENST00000284273 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.29□□□□□ -0.44
UBASH3B-201ENST00000284273 CAAP1Q9H8G2 361 aa12.29□□□□□ -0.44
UBASH3B-201ENST00000284273 SUPT7LO94864 414 aa12.29□□□□□ -0.44
UBASH3B-201ENST00000284273 ICAM1P05362 532 aa12.29□□□□□ -0.44
UBASH3B-201ENST00000284273 COMTP21964 271 aa12.29□□□□□ -0.44
UBASH3B-201ENST00000284273 CXCL9Q07325 125 aa12.29□□□□□ -0.44
UBASH3B-201ENST00000284273 PARGQ86W56 976 aa12.29□□□□□ -0.44
UBASH3B-201ENST00000284273 CCDC60Q8IWA6 550 aaPredicted RBP12.29□□□□□ -0.44
UBASH3B-201ENST00000284273 RBM15Q96T37 977 aaKnown RBP eCLIP12.29□□□□□ -0.44
UBASH3B-201ENST00000284273 ACOX2Q99424 681 aa12.29□□□□□ -0.44
UBASH3B-201ENST00000284273 STK36Q9NRP7 1315 aa12.29□□□□□ -0.44
UBASH3B-201ENST00000284273 CCDC188H7C350 402 aa12.29□□□□□ -0.44
UBASH3B-201ENST00000284273 CCNT2O60583 730 aaKnown RBP12.29□□□□□ -0.44
UBASH3B-201ENST00000284273 VPS26AO75436 327 aa12.29□□□□□ -0.44
UBASH3B-201ENST00000284273 NTSR2O95665 410 aa12.29□□□□□ -0.44
UBASH3B-201ENST00000284273 AMD1P17707 334 aa12.29□□□□□ -0.44
UBASH3B-201ENST00000284273 GARTP22102 1010 aa12.29□□□□□ -0.44
UBASH3B-201ENST00000284273 ARHGAP17Q68EM7 881 aa12.29□□□□□ -0.44
UBASH3B-201ENST00000284273 RNF44Q7L0R7 432 aa12.29□□□□□ -0.44
UBASH3B-201ENST00000284273 ADCK1Q86TW2 530 aa12.29□□□□□ -0.44
UBASH3B-201ENST00000284273 MRPL1Q9BYD6 325 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms