RNA–Protein interactions for RNA: ENST00000283415.3

LPCAT1-201, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-201ENST00000283415 LMNB2Q03252 620 aa14.4□□□□□ -0.1
LPCAT1-201ENST00000283415 XRCC4Q13426 336 aa14.4□□□□□ -0.1
LPCAT1-201ENST00000283415 PAN2Q504Q3 1202 aaKnown RBP14.4□□□□□ -0.1
LPCAT1-201ENST00000283415 TRMT10CQ7L0Y3 403 aaKnown RBP14.4□□□□□ -0.1
LPCAT1-201ENST00000283415 ABRAQ8N0Z2 381 aa14.4□□□□□ -0.1
LPCAT1-201ENST00000283415 DNAAF3Q8N9W5 541 aa14.4□□□□□ -0.1
LPCAT1-201ENST00000283415 C12orf42Q96LP6 360 aa14.4□□□□□ -0.1
LPCAT1-201ENST00000283415 NIF3L1Q9GZT8 377 aa14.4□□□□□ -0.1
LPCAT1-201ENST00000283415 PDGFCQ9NRA1 345 aa14.4□□□□□ -0.1
LPCAT1-201ENST00000283415 KCNG1Q9UIX4 513 aa14.4□□□□□ -0.1
LPCAT1-201ENST00000283415 PTPRJQ12913 1337 aa14.4□□□□□ -0.1
LPCAT1-201ENST00000283415 MAFGO15525 162 aa14.4□□□□□ -0.1
LPCAT1-201ENST00000283415 KRT16P08779 473 aa14.4□□□□□ -0.1
LPCAT1-201ENST00000283415 RFC1P35251 1148 aaPredicted RBP14.4□□□□□ -0.1
LPCAT1-201ENST00000283415 YWHAEP62258 255 aaKnown RBP14.4□□□□□ -0.1
LPCAT1-201ENST00000283415 LAMTOR4Q0VGL1 99 aa14.4□□□□□ -0.1
LPCAT1-201ENST00000283415 EML3Q32P44 896 aa14.4□□□□□ -0.1
LPCAT1-201ENST00000283415 TMEM63BQ5T3F8 832 aa14.4□□□□□ -0.1
LPCAT1-201ENST00000283415 SYDE1Q6ZW31 735 aaPredicted RBP14.4□□□□□ -0.1
LPCAT1-201ENST00000283415 SDCCAG8Q86SQ7 713 aaPredicted RBP14.4□□□□□ -0.1
LPCAT1-201ENST00000283415 GBP7Q8N8V2 638 aaPredicted RBP14.4□□□□□ -0.1
LPCAT1-201ENST00000283415 LGALS13Q9UHV8 139 aa14.4□□□□□ -0.1
LPCAT1-201ENST00000283415 TTLL13PA6NNM8 815 aa14.39□□□□□ -0.11
LPCAT1-201ENST00000283415 SNX3O60493 162 aa14.39□□□□□ -0.11
LPCAT1-201ENST00000283415 CTCFP49711 727 aaPredicted RBP14.39□□□□□ -0.11
LPCAT1-201ENST00000283415 ARL4CP56559 192 aa14.39□□□□□ -0.11
LPCAT1-201ENST00000283415 SP2Q02086 613 aa14.39□□□□□ -0.11
LPCAT1-201ENST00000283415 NPNTQ6UXI9 565 aa14.39□□□□□ -0.11
LPCAT1-201ENST00000283415 ABHD15Q6UXT9 468 aa14.39□□□□□ -0.11
LPCAT1-201ENST00000283415 MAGEC3Q8TD91 643 aa14.39□□□□□ -0.11
LPCAT1-201ENST00000283415 DCLK3Q9C098 648 aa14.39□□□□□ -0.11
LPCAT1-201ENST00000283415 NINJ2Q9NZG7 142 aa14.39□□□□□ -0.11
LPCAT1-201ENST00000283415 DNAJC8O75937 253 aaPredicted RBP14.39□□□□□ -0.11
LPCAT1-201ENST00000283415 CTSHP09668 335 aa14.39□□□□□ -0.11
LPCAT1-201ENST00000283415 ATP4AP20648 1035 aa14.39□□□□□ -0.11
LPCAT1-201ENST00000283415 KLRC2P26717 231 aa14.39□□□□□ -0.11
LPCAT1-201ENST00000283415 SERPINB6P35237 376 aa14.39□□□□□ -0.11
LPCAT1-201ENST00000283415 CBLBQ13191 982 aa14.39□□□□□ -0.11
LPCAT1-201ENST00000283415 FASTKD3Q14CZ7 662 aaKnown RBP14.39□□□□□ -0.11
LPCAT1-201ENST00000283415 C15orf59Q2T9L4 293 aaPredicted RBP14.39□□□□□ -0.11
LPCAT1-201ENST00000283415 DPY19L2Q6NUT2 758 aa14.39□□□□□ -0.11
LPCAT1-201ENST00000283415 FAM228AQ86W67 206 aa14.39□□□□□ -0.11
LPCAT1-201ENST00000283415 XPO7Q9UIA9 1087 aaKnown RBP14.39□□□□□ -0.11
LPCAT1-201ENST00000283415 CFAP73A6NFT4 308 aa14.39□□□□□ -0.11
LPCAT1-201ENST00000283415 LGR5O75473 907 aa14.39□□□□□ -0.11
LPCAT1-201ENST00000283415 HAUS5O94927 633 aa14.39□□□□□ -0.11
LPCAT1-201ENST00000283415 ENO1P06733 434 aaKnown RBP14.39□□□□□ -0.11
LPCAT1-201ENST00000283415 OAZ1P54368 228 aa14.39□□□□□ -0.11
LPCAT1-201ENST00000283415 SLC8A3P57103 927 aa14.39□□□□□ -0.11
LPCAT1-201ENST00000283415 MMRN1Q13201 1228 aa14.39□□□□□ -0.11
LPCAT1-201ENST00000283415 ITIH4Q14624 930 aa14.39□□□□□ -0.11
LPCAT1-201ENST00000283415 ZACNQ401N2 412 aa14.39□□□□□ -0.11
LPCAT1-201ENST00000283415 VSTM1Q6UX27 236 aa14.39□□□□□ -0.11
LPCAT1-201ENST00000283415 DICER1Q9UPY3 1922 aaKnown RBP14.38□□□□□ -0.11
LPCAT1-201ENST00000283415 FDX1P10109 184 aa14.38□□□□□ -0.11
LPCAT1-201ENST00000283415 EPHB2P29323 1055 aa14.38□□□□□ -0.11
LPCAT1-201ENST00000283415 VGLL4Q14135 290 aa14.38□□□□□ -0.11
LPCAT1-201ENST00000283415 SGSM1Q2NKQ1 1148 aa14.38□□□□□ -0.11
LPCAT1-201ENST00000283415 GALNTL6Q49A17 601 aa14.38□□□□□ -0.11
LPCAT1-201ENST00000283415 MTDHQ86UE4 582 aaKnown RBP14.38□□□□□ -0.11
LPCAT1-201ENST00000283415 MAP7D3Q8IWC1 876 aa14.38□□□□□ -0.11
LPCAT1-201ENST00000283415 C12orf29Q8N999 325 aa14.38□□□□□ -0.11
LPCAT1-201ENST00000283415 NOD1Q9Y239 953 aa14.38□□□□□ -0.11
LPCAT1-201ENST00000283415 CNTNAP2Q9UHC6 1331 aa14.38□□□□□ -0.11
LPCAT1-201ENST00000283415 MED7O43513 233 aa14.38□□□□□ -0.11
LPCAT1-201ENST00000283415 SLC4A1P02730 911 aa14.38□□□□□ -0.11
LPCAT1-201ENST00000283415 ARFIP2P53365 341 aa14.38□□□□□ -0.11
LPCAT1-201ENST00000283415 CAPSQ13938 189 aa14.38□□□□□ -0.11
LPCAT1-201ENST00000283415 TXNRD3NBQ6F5E7 133 aa14.38□□□□□ -0.11
LPCAT1-201ENST00000283415 DENND1BQ6P3S1 775 aa14.38□□□□□ -0.11
LPCAT1-201ENST00000283415 APOBEC3FQ8IUX4 373 aaKnown RBP14.38□□□□□ -0.11
LPCAT1-201ENST00000283415 TRIM55Q9BYV6 548 aa14.38□□□□□ -0.11
LPCAT1-201ENST00000283415 LPXNO60711 386 aa14.38□□□□□ -0.11
LPCAT1-201ENST00000283415 EDN1P05305 212 aa14.38□□□□□ -0.11
LPCAT1-201ENST00000283415 SDC4P31431 198 aa14.38□□□□□ -0.11
LPCAT1-201ENST00000283415 CACNB2Q08289 660 aaPredicted RBP14.38□□□□□ -0.11
LPCAT1-201ENST00000283415 BMPR2Q13873 1038 aa14.38□□□□□ -0.11
LPCAT1-201ENST00000283415 GBP5Q96PP8 586 aa14.38□□□□□ -0.11
LPCAT1-201ENST00000283415 FERMT1Q9BQL6 677 aa14.38□□□□□ -0.11
LPCAT1-201ENST00000283415 SNX25Q9H3E2 840 aa14.38□□□□□ -0.11
LPCAT1-201ENST00000283415 GEMIN8Q9NWZ8 242 aaKnown RBP14.38□□□□□ -0.11
LPCAT1-201ENST00000283415 PRKAG3Q9UGI9 489 aa14.38□□□□□ -0.11
LPCAT1-201ENST00000283415 ZNF214Q9UL59 606 aaPredicted RBP14.38□□□□□ -0.11
LPCAT1-201ENST00000283415 NR2E3Q9Y5X4 410 aa14.38□□□□□ -0.11
LPCAT1-201ENST00000283415 PTPN7P35236 360 aa14.37□□□□□ -0.11
LPCAT1-201ENST00000283415 SLC1A1P43005 524 aa14.37□□□□□ -0.11
LPCAT1-201ENST00000283415 MAMLD1Q13495 774 aa14.37□□□□□ -0.11
LPCAT1-201ENST00000283415 PLEKHA7Q6IQ23 1121 aa14.37□□□□□ -0.11
LPCAT1-201ENST00000283415 SCUBE3Q8IX30 993 aa14.37□□□□□ -0.11
LPCAT1-201ENST00000283415 AFG1LQ8WV93 481 aa14.37□□□□□ -0.11
LPCAT1-201ENST00000283415 HPDLQ96IR7 371 aa14.37□□□□□ -0.11
LPCAT1-201ENST00000283415 SPATC1LQ9H0A9 340 aa14.37□□□□□ -0.11
LPCAT1-201ENST00000283415 SIK2Q9H0K1 926 aa14.37□□□□□ -0.11
LPCAT1-201ENST00000283415 APOBEC3GQ9HC16 384 aaKnown RBP14.37□□□□□ -0.11
LPCAT1-201ENST00000283415 ARMCX1Q9P291 453 aa14.37□□□□□ -0.11
LPCAT1-201ENST00000283415 ZNF541Q9H0D2 1346 aa14.37□□□□□ -0.11
LPCAT1-201ENST00000283415 NCF2P19878 526 aaPredicted RBP14.37□□□□□ -0.11
LPCAT1-201ENST00000283415 GCAP28676 217 aa14.37□□□□□ -0.11
LPCAT1-201ENST00000283415 GSCP56915 257 aaPredicted RBP14.37□□□□□ -0.11
LPCAT1-201ENST00000283415 TTLL4Q14679 1199 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms