RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 COILP38432 576 aaPredicted RBP23.19■■□□□ 1.3
CCDC7-201ENST00000277657 LLGL1Q15334 1064 aa23.19■■□□□ 1.3
CCDC7-201ENST00000277657 CCDC137Q6PK04 289 aaKnown RBP23.19■■□□□ 1.3
CCDC7-201ENST00000277657 GLB1LQ6UWU2 654 aa23.19■■□□□ 1.3
CCDC7-201ENST00000277657 SCUBE3Q8IX30 993 aa23.19■■□□□ 1.3
CCDC7-201ENST00000277657 CAVIN3Q969G5 261 aa23.19■■□□□ 1.3
CCDC7-201ENST00000277657 DUSP16Q9BY84 665 aa23.19■■□□□ 1.3
CCDC7-201ENST00000277657 CRTAC1Q9NQ79 661 aa23.19■■□□□ 1.3
CCDC7-201ENST00000277657 ASNSD1Q9NWL6 643 aa23.19■■□□□ 1.3
CCDC7-201ENST00000277657 UTP11Q9Y3A2 253 aaKnown RBP23.19■■□□□ 1.3
CCDC7-201ENST00000277657 TSC2P49815 1807 aa23.19■■□□□ 1.3
CCDC7-201ENST00000277657 PITPNM1O00562 1244 aa23.19■■□□□ 1.3
CCDC7-201ENST00000277657 DPYSL4O14531 572 aa23.19■■□□□ 1.3
CCDC7-201ENST00000277657 XPO1O14980 1071 aaKnown RBP23.19■■□□□ 1.3
CCDC7-201ENST00000277657 NBNO60934 754 aa23.19■■□□□ 1.3
CCDC7-201ENST00000277657 KRT1P04264 644 aa23.19■■□□□ 1.3
CCDC7-201ENST00000277657 CYP11A1P05108 521 aa23.19■■□□□ 1.3
CCDC7-201ENST00000277657 KRT7P08729 469 aa23.19■■□□□ 1.3
CCDC7-201ENST00000277657 PCK1P35558 622 aa23.19■■□□□ 1.3
CCDC7-201ENST00000277657 FLT3P36888 993 aa23.19■■□□□ 1.3
CCDC7-201ENST00000277657 CETN2P41208 172 aa23.19■■□□□ 1.3
CCDC7-201ENST00000277657 ACADSBP45954 432 aa23.19■■□□□ 1.3
CCDC7-201ENST00000277657 HADHQ16836 314 aaKnown RBP23.19■■□□□ 1.3
CCDC7-201ENST00000277657 CCDC142Q17RM4 750 aa23.19■■□□□ 1.3
CCDC7-201ENST00000277657 JAMLQ86YT9 394 aa23.19■■□□□ 1.3
CCDC7-201ENST00000277657 RXFP2Q8WXD0 754 aa23.19■■□□□ 1.3
CCDC7-201ENST00000277657 RNF25Q96BH1 459 aaPredicted RBP23.19■■□□□ 1.3
CCDC7-201ENST00000277657 RAB17Q9H0T7 212 aa23.19■■□□□ 1.3
CCDC7-201ENST00000277657 KLHL11Q9NVR0 708 aa23.19■■□□□ 1.3
CCDC7-201ENST00000277657 TIMM13Q9Y5L4 95 aaPredicted RBP23.19■■□□□ 1.3
CCDC7-201ENST00000277657 M0QZQ0 153 aa23.18■■□□□ 1.3
CCDC7-201ENST00000277657 ODC1P11926 461 aa23.18■■□□□ 1.3
CCDC7-201ENST00000277657 PDGFRAP16234 1089 aa23.18■■□□□ 1.3
CCDC7-201ENST00000277657 IL1R2P27930 398 aa23.18■■□□□ 1.3
CCDC7-201ENST00000277657 ECHS1P30084 290 aa23.18■■□□□ 1.3
CCDC7-201ENST00000277657 PLCB3Q01970 1234 aa23.18■■□□□ 1.3
CCDC7-201ENST00000277657 NNTQ13423 1086 aa23.18■■□□□ 1.3
CCDC7-201ENST00000277657 CLLU1OSQ5K130 101 aa23.18■■□□□ 1.3
CCDC7-201ENST00000277657 SLCO2A1Q92959 643 aa23.18■■□□□ 1.3
CCDC7-201ENST00000277657 SYT15Q9BQS2 421 aa23.18■■□□□ 1.3
CCDC7-201ENST00000277657 ERP44Q9BS26 406 aa23.18■■□□□ 1.3
CCDC7-201ENST00000277657 TRIM51Q9BSJ1 452 aa23.18■■□□□ 1.3
CCDC7-201ENST00000277657 B3GNT5Q9BYG0 378 aa23.18■■□□□ 1.3
CCDC7-201ENST00000277657 RNF208Q9H0X6 261 aa23.18■■□□□ 1.3
CCDC7-201ENST00000277657 VIPAS39Q9H9C1 493 aa23.18■■□□□ 1.3
CCDC7-201ENST00000277657 RNF8O76064 485 aa23.17■■□□□ 1.3
CCDC7-201ENST00000277657 MYCP01106 439 aaPredicted RBP23.17■■□□□ 1.3
CCDC7-201ENST00000277657 SMC1AQ14683 1233 aaKnown RBP23.17■■□□□ 1.3
CCDC7-201ENST00000277657 TAF5Q15542 800 aa23.17■■□□□ 1.3
CCDC7-201ENST00000277657 PLEKHG4Q58EX7 1191 aa23.17■■□□□ 1.3
CCDC7-201ENST00000277657 MDH1BQ5I0G3 518 aa23.17■■□□□ 1.3
CCDC7-201ENST00000277657 DUPD1Q68J44 220 aa23.17■■□□□ 1.3
CCDC7-201ENST00000277657 DCLRE1AQ6PJP8 1040 aa23.17■■□□□ 1.3
CCDC7-201ENST00000277657 MFSD7Q6UXD7 560 aa23.17■■□□□ 1.3
CCDC7-201ENST00000277657 FAM43BQ6ZT52 329 aaPredicted RBP23.17■■□□□ 1.3
CCDC7-201ENST00000277657 ARCQ7LC44 396 aa23.17■■□□□ 1.3
CCDC7-201ENST00000277657 RAPGEF5Q92565 580 aa23.17■■□□□ 1.3
CCDC7-201ENST00000277657 HEMGNQ9BXL5 484 aa23.17■■□□□ 1.3
CCDC7-201ENST00000277657 CDH9Q9ULB4 789 aa23.17■■□□□ 1.3
CCDC7-201ENST00000277657 SPDYE4A6NLX3 237 aa23.17■■□□□ 1.3
CCDC7-201ENST00000277657 PI4K2BG5E9Z4 385 aa23.17■■□□□ 1.3
CCDC7-201ENST00000277657 COL6A1P12109 1028 aa23.17■■□□□ 1.3
CCDC7-201ENST00000277657 NPR3P17342 541 aa23.17■■□□□ 1.3
CCDC7-201ENST00000277657 MIPP30301 263 aa23.17■■□□□ 1.3
CCDC7-201ENST00000277657 TNNT3P45378 269 aaPredicted RBP23.17■■□□□ 1.3
CCDC7-201ENST00000277657 DSC1Q08554 894 aa23.17■■□□□ 1.3
CCDC7-201ENST00000277657 SPOCD1Q6ZMY3 1216 aa23.17■■□□□ 1.3
CCDC7-201ENST00000277657 SLC26A9Q7LBE3 791 aa23.17■■□□□ 1.3
CCDC7-201ENST00000277657 C1orf54Q8WWF1 131 aa23.17■■□□□ 1.3
CCDC7-201ENST00000277657 GDAP1L1Q96MZ0 367 aa23.17■■□□□ 1.3
CCDC7-201ENST00000277657 HOMER3Q9NSC5 361 aa23.17■■□□□ 1.3
CCDC7-201ENST00000277657 C3orf70A6NLC5 250 aaPredicted RBP23.16■■□□□ 1.3
CCDC7-201ENST00000277657 CLDN5O00501 218 aa23.16■■□□□ 1.3
CCDC7-201ENST00000277657 DAPK3O43293 454 aa23.16■■□□□ 1.3
CCDC7-201ENST00000277657 GRAP2O75791 330 aa23.16■■□□□ 1.3
CCDC7-201ENST00000277657 BRCC3P46736 316 aa23.16■■□□□ 1.3
CCDC7-201ENST00000277657 SLC8A3P57103 927 aa23.16■■□□□ 1.3
CCDC7-201ENST00000277657 CCDC14Q49A88 953 aa23.16■■□□□ 1.3
CCDC7-201ENST00000277657 NOMO2Q5JPE7 1267 aa23.16■■□□□ 1.3
CCDC7-201ENST00000277657 SND1Q7KZF4 910 aaKnown RBP eCLIP23.16■■□□□ 1.3
CCDC7-201ENST00000277657 PIGZQ86VD9 579 aa23.16■■□□□ 1.3
CCDC7-201ENST00000277657 DDX42Q86XP3 938 aaKnown RBP eCLIP23.16■■□□□ 1.3
CCDC7-201ENST00000277657 RTP3Q9BQQ7 232 aa23.16■■□□□ 1.3
CCDC7-201ENST00000277657 DCLK3Q9C098 648 aa23.16■■□□□ 1.3
CCDC7-201ENST00000277657 FAM114A2Q9NRY5 505 aa23.16■■□□□ 1.3
CCDC7-201ENST00000277657 CHST7Q9NS84 486 aa23.16■■□□□ 1.3
CCDC7-201ENST00000277657 TMEM161AQ9NX61 479 aa23.16■■□□□ 1.3
CCDC7-201ENST00000277657 RASAL2Q9UJF2 1139 aa23.16■■□□□ 1.3
CCDC7-201ENST00000277657 R3HDM2Q9Y2K5 976 aaKnown RBP23.16■■□□□ 1.3
CCDC7-201ENST00000277657 hCG_1818297A0A087WSY0 165 aa23.15■■□□□ 1.3
CCDC7-201ENST00000277657 I3L4J1 428 aa23.15■■□□□ 1.3
CCDC7-201ENST00000277657 TRUB2O95900 331 aaKnown RBP23.15■■□□□ 1.3
CCDC7-201ENST00000277657 PCSK1P29120 753 aa23.15■■□□□ 1.3
CCDC7-201ENST00000277657 CDKN2BP42772 138 aa23.15■■□□□ 1.3
CCDC7-201ENST00000277657 DRG2P55039 364 aaKnown RBP23.15■■□□□ 1.3
CCDC7-201ENST00000277657 TFDP3Q5H9I0 405 aa23.15■■□□□ 1.3
CCDC7-201ENST00000277657 ZFYVE27Q5T4F4 411 aa23.15■■□□□ 1.3
CCDC7-201ENST00000277657 CLEC20AQ6ZU45 233 aa23.15■■□□□ 1.3
CCDC7-201ENST00000277657 CCDC105Q8IYK2 499 aa23.15■■□□□ 1.3
CCDC7-201ENST00000277657 KRT222Q8N1A0 295 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms