RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 RTP1P59025 263 aa28.75■■■□□ 2.19
CBX4-201ENST00000269397 SLC25A11Q02978 314 aaKnown RBP28.75■■■□□ 2.19
CBX4-201ENST00000269397 LBRQ14739 615 aaKnown RBP28.75■■■□□ 2.19
CBX4-201ENST00000269397 ZBTB33Q86T24 672 aa28.75■■■□□ 2.19
CBX4-201ENST00000269397 ZNF526Q8TF50 670 aaPredicted RBP28.75■■■□□ 2.19
CBX4-201ENST00000269397 SYNCQ9H7C4 482 aa28.75■■■□□ 2.19
CBX4-201ENST00000269397 LRCH1Q9Y2L9 728 aa28.75■■■□□ 2.19
CBX4-201ENST00000269397 E7ESA3 106 aa28.74■■■□□ 2.19
CBX4-201ENST00000269397 CCND2P30279 289 aa28.74■■■□□ 2.19
CBX4-201ENST00000269397 PGM1P36871 562 aa28.74■■■□□ 2.19
CBX4-201ENST00000269397 ZC3H12AQ5D1E8 599 aaKnown RBP28.74■■■□□ 2.19
CBX4-201ENST00000269397 SLC30A9Q6PML9 568 aa28.74■■■□□ 2.19
CBX4-201ENST00000269397 RFX6Q8HWS3 928 aa28.74■■■□□ 2.19
CBX4-201ENST00000269397 APOPT1Q96IL0 206 aa28.74■■■□□ 2.19
CBX4-201ENST00000269397 KIAA1217Q5T5P2 1943 aa28.74■■■□□ 2.19
CBX4-201ENST00000269397 INHBAP08476 426 aa28.74■■■□□ 2.19
CBX4-201ENST00000269397 DHRS4L1P0CG22 281 aa28.74■■■□□ 2.19
CBX4-201ENST00000269397 NEK3P51956 506 aa28.74■■■□□ 2.19
CBX4-201ENST00000269397 NPNTQ6UXI9 565 aa28.74■■■□□ 2.19
CBX4-201ENST00000269397 PRPF39Q86UA1 669 aaKnown RBP28.74■■■□□ 2.19
CBX4-201ENST00000269397 KBTBD2Q8IY47 623 aa28.74■■■□□ 2.19
CBX4-201ENST00000269397 RDM1Q8NG50 284 aa28.74■■■□□ 2.19
CBX4-201ENST00000269397 HSPH1Q92598 858 aa28.74■■■□□ 2.19
CBX4-201ENST00000269397 FAM161BQ96MY7 647 aa28.74■■■□□ 2.19
CBX4-201ENST00000269397 PAPOLBQ9NRJ5 636 aaKnown RBP28.74■■■□□ 2.19
CBX4-201ENST00000269397 RNF146Q9NTX7 359 aa28.74■■■□□ 2.19
CBX4-201ENST00000269397 C2CD2Q9Y426 696 aa28.74■■■□□ 2.19
CBX4-201ENST00000269397 RGPD3A6NKT7 1758 aaPredicted RBP28.73■■■□□ 2.19
CBX4-201ENST00000269397 RGPD4Q7Z3J3 1758 aa28.73■■■□□ 2.19
CBX4-201ENST00000269397 H3BRJ5 948 aa28.73■■■□□ 2.19
CBX4-201ENST00000269397 NPTXRO95502 500 aa28.73■■■□□ 2.19
CBX4-201ENST00000269397 ENO1P06733 434 aaKnown RBP28.73■■■□□ 2.19
CBX4-201ENST00000269397 FESP07332 822 aa28.73■■■□□ 2.19
CBX4-201ENST00000269397 KDELR1P24390 212 aa28.73■■■□□ 2.19
CBX4-201ENST00000269397 EIF3EP60228 445 aaKnown RBP28.73■■■□□ 2.19
CBX4-201ENST00000269397 SGSM1Q2NKQ1 1148 aa28.73■■■□□ 2.19
CBX4-201ENST00000269397 C11orf91Q3C1V1 193 aa28.73■■■□□ 2.19
CBX4-201ENST00000269397 IRGCQ6NXR0 463 aa28.73■■■□□ 2.19
CBX4-201ENST00000269397 ARHGEF4Q9NR80 690 aa28.73■■■□□ 2.19
CBX4-201ENST00000269397 A0A0B4J269 797 aa28.73■■■□□ 2.19
CBX4-201ENST00000269397 IQANK1A0A1B0GTG1 560 aa28.73■■■□□ 2.19
CBX4-201ENST00000269397 CCDC195A0A1B0GUA6 201 aa28.73■■■□□ 2.19
CBX4-201ENST00000269397 TBC1D12O60347 775 aa28.73■■■□□ 2.19
CBX4-201ENST00000269397 KITP10721 976 aa28.73■■■□□ 2.19
CBX4-201ENST00000269397 SKIP12755 728 aa28.73■■■□□ 2.19
CBX4-201ENST00000269397 GCLCP48506 637 aaPredicted RBP28.73■■■□□ 2.19
CBX4-201ENST00000269397 SERPINB4P48594 390 aa28.73■■■□□ 2.19
CBX4-201ENST00000269397 SARNPP82979 210 aaKnown RBP28.73■■■□□ 2.19
CBX4-201ENST00000269397 ORC1Q13415 861 aa28.73■■■□□ 2.19
CBX4-201ENST00000269397 DENND1BQ6P3S1 775 aa28.73■■■□□ 2.19
CBX4-201ENST00000269397 CLPTM1LQ96KA5 538 aa28.73■■■□□ 2.19
CBX4-201ENST00000269397 SH3GL3Q99963 347 aa28.73■■■□□ 2.19
CBX4-201ENST00000269397 CALN1Q9BXU9 219 aa28.73■■■□□ 2.19
CBX4-201ENST00000269397 MARCOQ9UEW3 520 aaPredicted RBP28.73■■■□□ 2.19
CBX4-201ENST00000269397 ARID2Q68CP9 1835 aa28.72■■■□□ 2.19
CBX4-201ENST00000269397 B2RBV5 119 aa28.72■■■□□ 2.19
CBX4-201ENST00000269397 DNAJC6O75061 913 aa28.72■■■□□ 2.19
CBX4-201ENST00000269397 RARBP10826 455 aa28.72■■■□□ 2.19
CBX4-201ENST00000269397 KRT3P12035 628 aa28.72■■■□□ 2.19
CBX4-201ENST00000269397 ZNF200P98182 395 aaPredicted RBP28.72■■■□□ 2.19
CBX4-201ENST00000269397 NBPF20Q3BBV1 942 aa28.72■■■□□ 2.19
CBX4-201ENST00000269397 PTPN20Q4JDL3 420 aa28.72■■■□□ 2.19
CBX4-201ENST00000269397 BBS12Q6ZW61 710 aa28.72■■■□□ 2.19
CBX4-201ENST00000269397 CTAGE3PQ8IX95 158 aa28.72■■■□□ 2.19
CBX4-201ENST00000269397 UBR7Q8N806 425 aa28.72■■■□□ 2.19
CBX4-201ENST00000269397 ATG4CQ96DT6 458 aa28.72■■■□□ 2.19
CBX4-201ENST00000269397 CFAP36Q96G28 342 aa28.72■■■□□ 2.19
CBX4-201ENST00000269397 ASS1P00966 412 aaKnown RBP28.72■■■□□ 2.19
CBX4-201ENST00000269397 OR52E8Q6IFG1 317 aa28.72■■■□□ 2.19
CBX4-201ENST00000269397 TREML1Q86YW5 311 aa28.72■■■□□ 2.19
CBX4-201ENST00000269397 KCTD6Q8NC69 237 aa28.72■■■□□ 2.19
CBX4-201ENST00000269397 TUBB6Q9BUF5 446 aa28.72■■■□□ 2.19
CBX4-201ENST00000269397 CYTH4Q9UIA0 394 aa28.72■■■□□ 2.19
CBX4-201ENST00000269397 H0YCG3 227 aa28.71■■■□□ 2.19
CBX4-201ENST00000269397 RBP3P10745 1247 aa28.71■■■□□ 2.19
CBX4-201ENST00000269397 CALRP27797 417 aaKnown RBP28.71■■■□□ 2.19
CBX4-201ENST00000269397 PAPOLAP51003 745 aaKnown RBP28.71■■■□□ 2.19
CBX4-201ENST00000269397 INHBEP58166 350 aa28.71■■■□□ 2.19
CBX4-201ENST00000269397 OCRLQ01968 901 aa28.71■■■□□ 2.19
CBX4-201ENST00000269397 DPYSL3Q14195 570 aa28.71■■■□□ 2.19
CBX4-201ENST00000269397 PPP1R2P3Q6NXS1 205 aa28.71■■■□□ 2.19
CBX4-201ENST00000269397 ABLIM1O14639 778 aa28.71■■■□□ 2.19
CBX4-201ENST00000269397 AHCYL1O43865 530 aa28.71■■■□□ 2.19
CBX4-201ENST00000269397 MTMR2Q13614 643 aa28.71■■■□□ 2.19
CBX4-201ENST00000269397 GPRASP2Q96D09 838 aa28.71■■■□□ 2.19
CBX4-201ENST00000269397 VCXQ9H320 206 aa28.71■■■□□ 2.19
CBX4-201ENST00000269397 RPAP3Q9H6T3 665 aaPredicted RBP28.71■■■□□ 2.19
CBX4-201ENST00000269397 KRT82Q9NSB4 513 aa28.71■■■□□ 2.19
CBX4-201ENST00000269397 STX18Q9P2W9 335 aaKnown RBP28.71■■■□□ 2.19
CBX4-201ENST00000269397 ASB3Q9Y575 518 aa28.71■■■□□ 2.19
CBX4-201ENST00000269397 NDC80O14777 642 aa28.7■■■□□ 2.19
CBX4-201ENST00000269397 LSM8O95777 96 aaKnown RBP28.7■■■□□ 2.19
CBX4-201ENST00000269397 CD19P15391 556 aa28.7■■■□□ 2.19
CBX4-201ENST00000269397 KCNA3P22001 575 aa28.7■■■□□ 2.19
CBX4-201ENST00000269397 KDSRQ06136 332 aa28.7■■■□□ 2.19
CBX4-201ENST00000269397 MMRN1Q13201 1228 aa28.7■■■□□ 2.19
CBX4-201ENST00000269397 SLFN12LQ6IEE8 588 aa28.7■■■□□ 2.19
CBX4-201ENST00000269397 STYK1Q6J9G0 422 aa28.7■■■□□ 2.19
CBX4-201ENST00000269397 ABHD15Q6UXT9 468 aa28.7■■■□□ 2.19
CBX4-201ENST00000269397 SH2D5Q6ZV89 423 aa28.7■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms