RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 AGAP3Q96P47 875 aa15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 ERP44Q9BS26 406 aa15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 C16orf70Q9BSU1 422 aa15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 CCDC68Q9H2F9 335 aa15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 R3HDMLQ9H3Y0 253 aa15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 ZMYM2Q9UBW7 1377 aa15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 DPYSL4O14531 572 aa15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 FBXO21O94952 628 aa15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 APRTP07741 180 aa15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 IRF1P10914 325 aa15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 XPAP23025 273 aaPredicted RBP15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 GGCXP38435 758 aa15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 PRMT2P55345 433 aa15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 PURAQ00577 322 aaKnown RBP15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 TFDP3Q5H9I0 405 aa15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 C3orf20Q8ND61 904 aa15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 STKLD1Q8NE28 680 aa15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 ACTRT1Q8TDG2 376 aa15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 PDCD6IPQ8WUM4 868 aaKnown RBP15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 TRIB2Q92519 343 aa15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 PCDHGC5Q9Y5F6 944 aa15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 MOXD2PA6NHM9 499 aa15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 F8VP50 259 aa15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 YWHAZP63104 245 aaKnown RBP15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 MTM1Q13496 603 aa15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 CCDC121Q6ZUS5 278 aa15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 TMC7Q7Z402 723 aa15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 SMARCD1Q96GM5 515 aa15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 PCDHB18PQ96TA0 734 aa15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 MRPL45Q9BRJ2 306 aaKnown RBP15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 GTF2IRD1Q9UHL9 959 aa15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 ZNF263O14978 683 aa15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 GARSP41250 739 aaKnown RBP15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 HTRA3P83110 453 aa15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 SLC39A12Q504Y0 691 aa15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 USP33Q8TEY7 942 aa15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 INTS9Q9NV88 658 aaKnown RBP15.12■□□□□ 0.01
PDLIM2-201ENST00000265810 CTIFO43310 598 aaKnown RBP15.11■□□□□ 0.01
PDLIM2-201ENST00000265810 PYGMP11217 842 aa15.11■□□□□ 0.01
PDLIM2-201ENST00000265810 BRCC3P46736 316 aa15.11■□□□□ 0.01
PDLIM2-201ENST00000265810 NOMO3P69849 1222 aa15.11■□□□□ 0.01
PDLIM2-201ENST00000265810 FYB2Q5VWT5 728 aa15.11■□□□□ 0.01
PDLIM2-201ENST00000265810 EFCAB13Q8IY85 973 aa15.11■□□□□ 0.01
PDLIM2-201ENST00000265810 CCDC33Q8N5R6 958 aa15.11■□□□□ 0.01
PDLIM2-201ENST00000265810 EXD1Q8NHP7 514 aa15.11■□□□□ 0.01
PDLIM2-201ENST00000265810 TRAIPQ9BWF2 469 aa15.11■□□□□ 0.01
PDLIM2-201ENST00000265810 KCND1Q9NSA2 647 aa15.11■□□□□ 0.01
PDLIM2-201ENST00000265810 PCDHB5Q9Y5E4 795 aa15.11■□□□□ 0.01
PDLIM2-201ENST00000265810 PIGRP01833 764 aa15.11■□□□□ 0.01
PDLIM2-201ENST00000265810 SELPP16109 830 aa15.11■□□□□ 0.01
PDLIM2-201ENST00000265810 RPL10AP62906 217 aaKnown RBP15.11■□□□□ 0.01
PDLIM2-201ENST00000265810 THOC5Q13769 683 aaKnown RBP15.11■□□□□ 0.01
PDLIM2-201ENST00000265810 SYDE1Q6ZW31 735 aaPredicted RBP15.11■□□□□ 0.01
PDLIM2-201ENST00000265810 SLFN11Q7Z7L1 901 aa15.11■□□□□ 0.01
PDLIM2-201ENST00000265810 MX2P20592 715 aa15.11■□□□□ 0.01
PDLIM2-201ENST00000265810 CENPCQ03188 943 aa15.11■□□□□ 0.01
PDLIM2-201ENST00000265810 MAMLD1Q13495 774 aa15.11■□□□□ 0.01
PDLIM2-201ENST00000265810 SETDB1Q15047 1291 aa15.11■□□□□ 0.01
PDLIM2-201ENST00000265810 C6orf118Q5T5N4 469 aa15.11■□□□□ 0.01
PDLIM2-201ENST00000265810 GDF6Q6KF10 455 aaPredicted RBP15.11■□□□□ 0.01
PDLIM2-201ENST00000265810 FAM71DQ8N9W8 422 aa15.11■□□□□ 0.01
PDLIM2-201ENST00000265810 B3GALNT2Q8NCR0 500 aa15.11■□□□□ 0.01
PDLIM2-201ENST00000265810 RIN2Q8WYP3 895 aaPredicted RBP15.11■□□□□ 0.01
PDLIM2-201ENST00000265810 KRT35Q92764 455 aa15.11■□□□□ 0.01
PDLIM2-201ENST00000265810 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.11■□□□□ 0.01
PDLIM2-201ENST00000265810 DMGDHQ9UI17 866 aaKnown RBP15.11■□□□□ 0.01
PDLIM2-201ENST00000265810 DERAQ9Y315 318 aa15.11■□□□□ 0.01
PDLIM2-201ENST00000265810 MYH4Q9Y623 1939 aa15.11■□□□□ 0.01
PDLIM2-201ENST00000265810 F9P00740 461 aa15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 MT-ND3P03897 115 aa15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 AMHP03971 560 aa15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 RFC1P35251 1148 aaPredicted RBP15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 MXRA7P84157 204 aa15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 SLC6A3Q01959 620 aa15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 GABPB1Q06547 395 aaPredicted RBP15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 ADCY2Q08462 1091 aa15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 SMAD1Q15797 465 aaKnown RBP15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 ITPRIPL1Q6GPH6 555 aa15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 B3GNT9Q6UX72 402 aa15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 RAPH1Q70E73 1250 aa15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 CHSY1Q86X52 802 aa15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 ZNF516Q92618 1163 aa15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 DMAP1Q9NPF5 467 aaPredicted RBP15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 RNF186Q9NXI6 227 aa15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 AP4E1Q9UPM8 1137 aa15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 GNRH1P01148 92 aa15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 ITIH2P19823 946 aa15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 RPL9P32969 192 aaKnown RBP15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 MAP2K2P36507 400 aa15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 SPOCD1Q6ZMY3 1216 aa15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 KDELC2Q7Z4H8 507 aa15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 DEFB106AQ8N104 65 aa15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 ARHGAP18Q8N392 663 aa15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 LRRN4CLQ8ND94 238 aa15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 ADAM32Q8TC27 787 aa15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 PNKPQ96T60 521 aa15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 APOBEC3GQ9HC16 384 aaKnown RBP15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 RREB1Q92766 1687 aa15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 HIF1AQ16665 826 aa15.1■□□□□ 0.01
PDLIM2-201ENST00000265810 SLC24A5Q71RS6 500 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms