RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 SENP1Q9P0U3 644 aa16.9■□□□□ 0.3
PDZRN3-201ENST00000263666 COL16A1Q07092 1604 aaPredicted RBP16.89■□□□□ 0.3
PDZRN3-201ENST00000263666 NME3Q13232 169 aa16.89■□□□□ 0.29
PDZRN3-201ENST00000263666 LACTB2Q53H82 288 aaPredicted RBP16.89■□□□□ 0.29
PDZRN3-201ENST00000263666 C16orf46Q6P387 395 aa16.89■□□□□ 0.29
PDZRN3-201ENST00000263666 FASTKD5Q7L8L6 764 aaKnown RBP16.89■□□□□ 0.29
PDZRN3-201ENST00000263666 GPC2Q8N158 579 aa16.89■□□□□ 0.29
PDZRN3-201ENST00000263666 KCTD17Q8N5Z5 321 aa16.89■□□□□ 0.29
PDZRN3-201ENST00000263666 BEGAINQ9BUH8 593 aa16.89■□□□□ 0.29
PDZRN3-201ENST00000263666 UNKQ9C0B0 810 aaKnown RBP16.89■□□□□ 0.29
PDZRN3-201ENST00000263666 CCDC22O60826 627 aa16.89■□□□□ 0.29
PDZRN3-201ENST00000263666 MUTP22033 750 aa16.89■□□□□ 0.29
PDZRN3-201ENST00000263666 KPNB1Q14974 876 aaKnown RBP16.89■□□□□ 0.29
PDZRN3-201ENST00000263666 SLC39A4Q6P5W5 647 aa16.89■□□□□ 0.29
PDZRN3-201ENST00000263666 HACE1Q8IYU2 909 aa16.89■□□□□ 0.29
PDZRN3-201ENST00000263666 CGRRF1Q99675 332 aa16.89■□□□□ 0.29
PDZRN3-201ENST00000263666 SPC25Q9HBM1 224 aa16.89■□□□□ 0.29
PDZRN3-201ENST00000263666 NR2E3Q9Y5X4 410 aa16.89■□□□□ 0.29
PDZRN3-201ENST00000263666 DHX15O43143 795 aaKnown RBP16.89■□□□□ 0.29
PDZRN3-201ENST00000263666 ATP9BO43861 1147 aa16.89■□□□□ 0.29
PDZRN3-201ENST00000263666 KRT38O76015 456 aa16.89■□□□□ 0.29
PDZRN3-201ENST00000263666 RPL22P35268 128 aaKnown RBP16.89■□□□□ 0.29
PDZRN3-201ENST00000263666 GDF10P55107 478 aa16.89■□□□□ 0.29
PDZRN3-201ENST00000263666 NCKAP1LP55160 1127 aa16.89■□□□□ 0.29
PDZRN3-201ENST00000263666 MORF4L2Q15014 288 aa16.89■□□□□ 0.29
PDZRN3-201ENST00000263666 ATF7IP2Q5U623 682 aa16.89■□□□□ 0.29
PDZRN3-201ENST00000263666 PIP4K2CQ8TBX8 421 aa16.89■□□□□ 0.29
PDZRN3-201ENST00000263666 CLEC4DQ8WXI8 215 aa16.89■□□□□ 0.29
PDZRN3-201ENST00000263666 KIF12Q96FN5 646 aa16.89■□□□□ 0.29
PDZRN3-201ENST00000263666 XPNPEP1Q9NQW7 623 aa16.89■□□□□ 0.29
PDZRN3-201ENST00000263666 SMCHD1A6NHR9 2005 aa16.89■□□□□ 0.29
PDZRN3-201ENST00000263666 NHSL1Q5SYE7 1610 aa16.88■□□□□ 0.29
PDZRN3-201ENST00000263666 STK10O94804 968 aaKnown RBP16.88■□□□□ 0.29
PDZRN3-201ENST00000263666 VSIG10LQ86VR7 867 aa16.88■□□□□ 0.29
PDZRN3-201ENST00000263666 FAM228AQ86W67 206 aa16.88■□□□□ 0.29
PDZRN3-201ENST00000263666 AVENQ9NQS1 362 aaPredicted RBP16.88■□□□□ 0.29
PDZRN3-201ENST00000263666 B4GALT5O43286 388 aa16.88■□□□□ 0.29
PDZRN3-201ENST00000263666 MGRN1O60291 552 aa16.88■□□□□ 0.29
PDZRN3-201ENST00000263666 KRT36O76013 467 aa16.88■□□□□ 0.29
PDZRN3-201ENST00000263666 MIPP30301 263 aa16.88■□□□□ 0.29
PDZRN3-201ENST00000263666 NOVP48745 357 aa16.88■□□□□ 0.29
PDZRN3-201ENST00000263666 KLC1Q07866 573 aa16.88■□□□□ 0.29
PDZRN3-201ENST00000263666 CRYGNQ8WXF5 182 aa16.88■□□□□ 0.29
PDZRN3-201ENST00000263666 DDX50Q9BQ39 737 aaKnown RBP16.88■□□□□ 0.29
PDZRN3-201ENST00000263666 DNAI2Q9GZS0 605 aa16.88■□□□□ 0.29
PDZRN3-201ENST00000263666 ACSS2Q9NR19 701 aa16.88■□□□□ 0.29
PDZRN3-201ENST00000263666 DGKIO75912 1065 aa16.88■□□□□ 0.29
PDZRN3-201ENST00000263666 AQP5P55064 265 aa16.88■□□□□ 0.29
PDZRN3-201ENST00000263666 WNT7BP56706 349 aa16.88■□□□□ 0.29
PDZRN3-201ENST00000263666 ACOT1Q86TX2 421 aa16.88■□□□□ 0.29
PDZRN3-201ENST00000263666 KATNAL2Q8IYT4 538 aa16.88■□□□□ 0.29
PDZRN3-201ENST00000263666 NSL1Q96IY1 281 aa16.88■□□□□ 0.29
PDZRN3-201ENST00000263666 USP18Q9UMW8 372 aa16.88■□□□□ 0.29
PDZRN3-201ENST00000263666 RABGAP1LQ5R372 815 aa16.88■□□□□ 0.29
PDZRN3-201ENST00000263666 GJC2Q5T442 439 aaPredicted RBP16.88■□□□□ 0.29
PDZRN3-201ENST00000263666 ATG16L1Q676U5 607 aa16.88■□□□□ 0.29
PDZRN3-201ENST00000263666 SREK1Q8WXA9 508 aaKnown RBP16.88■□□□□ 0.29
PDZRN3-201ENST00000263666 RXFP2Q8WXD0 754 aa16.88■□□□□ 0.29
PDZRN3-201ENST00000263666 CDKL2Q92772 493 aa16.88■□□□□ 0.29
PDZRN3-201ENST00000263666 GPRASP2Q96D09 838 aa16.88■□□□□ 0.29
PDZRN3-201ENST00000263666 PLCH1Q4KWH8 1693 aa16.87■□□□□ 0.29
PDZRN3-201ENST00000263666 PTPRJQ12913 1337 aa16.87■□□□□ 0.29
PDZRN3-201ENST00000263666 SRRM3A6NNA2 597 aaPredicted RBP16.87■□□□□ 0.29
PDZRN3-201ENST00000263666 PHKA2P46019 1235 aa16.87■□□□□ 0.29
PDZRN3-201ENST00000263666 BNIP1Q12981 228 aa16.87■□□□□ 0.29
PDZRN3-201ENST00000263666 TTC7BQ86TV6 843 aa16.87■□□□□ 0.29
PDZRN3-201ENST00000263666 APOL2Q9BQE5 337 aa16.87■□□□□ 0.29
PDZRN3-201ENST00000263666 CHKBQ9Y259 395 aa16.87■□□□□ 0.29
PDZRN3-201ENST00000263666 KCNA3P22001 575 aa16.87■□□□□ 0.29
PDZRN3-201ENST00000263666 ARL4AP40617 200 aa16.87■□□□□ 0.29
PDZRN3-201ENST00000263666 RPL10AP62906 217 aaKnown RBP16.87■□□□□ 0.29
PDZRN3-201ENST00000263666 C1QBPQ07021 282 aaKnown RBP16.87■□□□□ 0.29
PDZRN3-201ENST00000263666 HEATR6Q6AI08 1181 aaKnown RBP16.87■□□□□ 0.29
PDZRN3-201ENST00000263666 EFCAB12Q6NXP0 572 aa16.87■□□□□ 0.29
PDZRN3-201ENST00000263666 WDR75Q8IWA0 830 aaKnown RBP16.87■□□□□ 0.29
PDZRN3-201ENST00000263666 GPRC5DQ9NZD1 345 aa16.87■□□□□ 0.29
PDZRN3-201ENST00000263666 MYPNQ86TC9 1320 aa16.87■□□□□ 0.29
PDZRN3-201ENST00000263666 CELF2O95319 508 aaKnown RBP16.87■□□□□ 0.29
PDZRN3-201ENST00000263666 VTNP04004 478 aa16.87■□□□□ 0.29
PDZRN3-201ENST00000263666 TYK2P29597 1187 aa16.87■□□□□ 0.29
PDZRN3-201ENST00000263666 CRYMQ14894 314 aa16.87■□□□□ 0.29
PDZRN3-201ENST00000263666 RASA2Q15283 850 aa16.87■□□□□ 0.29
PDZRN3-201ENST00000263666 FNBP1LQ5T0N5 605 aa16.87■□□□□ 0.29
PDZRN3-201ENST00000263666 MFSD5Q6N075 450 aa16.87■□□□□ 0.29
PDZRN3-201ENST00000263666 BZW1Q7L1Q6 419 aaKnown RBP16.87■□□□□ 0.29
PDZRN3-201ENST00000263666 FAM13CQ8NE31 585 aa16.87■□□□□ 0.29
PDZRN3-201ENST00000263666 SEPT1Q8WYJ6 367 aa16.87■□□□□ 0.29
PDZRN3-201ENST00000263666 MMP19Q99542 508 aa16.87■□□□□ 0.29
PDZRN3-201ENST00000263666 FCHO1O14526 889 aa16.86■□□□□ 0.29
PDZRN3-201ENST00000263666 ZWINTO95229 277 aa16.86■□□□□ 0.29
PDZRN3-201ENST00000263666 HUNKP57058 714 aa16.86■□□□□ 0.29
PDZRN3-201ENST00000263666 AP1ARQ63HQ0 302 aa16.86■□□□□ 0.29
PDZRN3-201ENST00000263666 DPY19L2P1Q6NXN4 242 aa16.86■□□□□ 0.29
PDZRN3-201ENST00000263666 POLNQ7Z5Q5 900 aa16.86■□□□□ 0.29
PDZRN3-201ENST00000263666 TRPM4Q8TD43 1214 aa16.86■□□□□ 0.29
PDZRN3-201ENST00000263666 COPS5Q92905 334 aa16.86■□□□□ 0.29
PDZRN3-201ENST00000263666 E2F7Q96AV8 911 aa16.86■□□□□ 0.29
PDZRN3-201ENST00000263666 MFSD14AQ96MC6 490 aa16.86■□□□□ 0.29
PDZRN3-201ENST00000263666 PCDH9Q9HC56 1237 aa16.86■□□□□ 0.29
PDZRN3-201ENST00000263666 IL1RAPL1Q9NZN1 696 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms