RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 KREMEN1Q96MU8 473 aa19.85■□□□□ 0.77
CYSTM1-201ENST00000261811 SLITRK1Q96PX8 696 aa19.85■□□□□ 0.77
CYSTM1-201ENST00000261811 DUSP16Q9BY84 665 aa19.85■□□□□ 0.77
CYSTM1-201ENST00000261811 HSD3B7Q9H2F3 369 aa19.85■□□□□ 0.77
CYSTM1-201ENST00000261811 SLITRK6Q9H5Y7 841 aa19.85■□□□□ 0.77
CYSTM1-201ENST00000261811 CSNK1G1Q9HCP0 422 aa19.85■□□□□ 0.77
CYSTM1-201ENST00000261811 PNPLA8Q9NP80 782 aa19.85■□□□□ 0.77
CYSTM1-201ENST00000261811 EPS15L1Q9UBC2 864 aa19.85■□□□□ 0.77
CYSTM1-201ENST00000261811 CNTN6Q9UQ52 1028 aa19.85■□□□□ 0.77
CYSTM1-201ENST00000261811 A0A1W2PRU2 124 aa19.84■□□□□ 0.77
CYSTM1-201ENST00000261811 NPR3P17342 541 aa19.84■□□□□ 0.77
CYSTM1-201ENST00000261811 DDX6P26196 483 aaKnown RBP eCLIP19.84■□□□□ 0.77
CYSTM1-201ENST00000261811 BPIFB4P59827 614 aa19.84■□□□□ 0.77
CYSTM1-201ENST00000261811 KCNMA1Q12791 1236 aa19.84■□□□□ 0.77
CYSTM1-201ENST00000261811 RAPGEF1Q13905 1077 aa19.84■□□□□ 0.77
CYSTM1-201ENST00000261811 KLHDC7AQ5VTJ3 777 aa19.84■□□□□ 0.77
CYSTM1-201ENST00000261811 TMC8Q8IU68 726 aa19.84■□□□□ 0.77
CYSTM1-201ENST00000261811 ANKRD52Q8NB46 1076 aa19.84■□□□□ 0.77
CYSTM1-201ENST00000261811 ING5Q8WYH8 240 aa19.84■□□□□ 0.77
CYSTM1-201ENST00000261811 MYADMQ96S97 322 aa19.84■□□□□ 0.77
CYSTM1-201ENST00000261811 KCNK16Q96T55 309 aa19.84■□□□□ 0.77
CYSTM1-201ENST00000261811 LRRC3Q9BY71 257 aa19.84■□□□□ 0.77
CYSTM1-201ENST00000261811 FBXO44Q9H4M3 255 aa19.84■□□□□ 0.77
CYSTM1-201ENST00000261811 SIX2Q9NPC8 291 aa19.84■□□□□ 0.77
CYSTM1-201ENST00000261811 IGSF9Q9P2J2 1179 aa19.84■□□□□ 0.77
CYSTM1-201ENST00000261811 SOBPA7XYQ1 873 aa19.83■□□□□ 0.77
CYSTM1-201ENST00000261811 HMGA1P17096 107 aaKnown RBP19.83■□□□□ 0.77
CYSTM1-201ENST00000261811 BCAT1P54687 386 aa19.83■□□□□ 0.77
CYSTM1-201ENST00000261811 PTK2Q05397 1052 aa19.83■□□□□ 0.77
CYSTM1-201ENST00000261811 SLC5A9Q2M3M2 681 aa19.83■□□□□ 0.77
CYSTM1-201ENST00000261811 GJB7Q6PEY0 223 aa19.83■□□□□ 0.77
CYSTM1-201ENST00000261811 NPAS3Q8IXF0 933 aa19.83■□□□□ 0.77
CYSTM1-201ENST00000261811 PDZD8Q8NEN9 1154 aa19.83■□□□□ 0.77
CYSTM1-201ENST00000261811 SHC3Q92529 594 aa19.83■□□□□ 0.77
CYSTM1-201ENST00000261811 ERGIC2Q96RQ1 377 aa19.83■□□□□ 0.77
CYSTM1-201ENST00000261811 UBXN6Q9BZV1 441 aa19.83■□□□□ 0.77
CYSTM1-201ENST00000261811 HELZP42694 1942 aaKnown RBP19.83■□□□□ 0.76
CYSTM1-201ENST00000261811 TPM3P06753 285 aa19.82■□□□□ 0.76
CYSTM1-201ENST00000261811 UCHL3P15374 230 aa19.82■□□□□ 0.76
CYSTM1-201ENST00000261811 CEBPBP17676 345 aa19.82■□□□□ 0.76
CYSTM1-201ENST00000261811 YWHAQP27348 245 aa19.82■□□□□ 0.76
CYSTM1-201ENST00000261811 PDE6CP51160 858 aa19.82■□□□□ 0.76
CYSTM1-201ENST00000261811 ZNF445P59923 1031 aa19.82■□□□□ 0.76
CYSTM1-201ENST00000261811 MTMR3Q13615 1198 aa19.82■□□□□ 0.76
CYSTM1-201ENST00000261811 SYCP1Q15431 976 aa19.82■□□□□ 0.76
CYSTM1-201ENST00000261811 TEAD2Q15562 447 aa19.82■□□□□ 0.76
CYSTM1-201ENST00000261811 CNGA2Q16280 664 aa19.82■□□□□ 0.76
CYSTM1-201ENST00000261811 GOLGA7BQ2TAP0 167 aa19.82■□□□□ 0.76
CYSTM1-201ENST00000261811 CLEC20AQ6ZU45 233 aa19.82■□□□□ 0.76
CYSTM1-201ENST00000261811 SHKBP1Q8TBC3 707 aa19.82■□□□□ 0.76
CYSTM1-201ENST00000261811 OVCA2Q8WZ82 227 aa19.82■□□□□ 0.76
CYSTM1-201ENST00000261811 TCEAL4Q96EI5 215 aa19.82■□□□□ 0.76
CYSTM1-201ENST00000261811 MCRS1Q96EZ8 462 aa19.82■□□□□ 0.76
CYSTM1-201ENST00000261811 NECAB3Q96P71 396 aaPredicted RBP19.82■□□□□ 0.76
CYSTM1-201ENST00000261811 SMOQ99835 787 aa19.82■□□□□ 0.76
CYSTM1-201ENST00000261811 TTLL2Q9BWV7 592 aa19.82■□□□□ 0.76
CYSTM1-201ENST00000261811 ZNF334Q9HCZ1 680 aaPredicted RBP19.82■□□□□ 0.76
CYSTM1-201ENST00000261811 RTN4Q9NQC3 1192 aaKnown RBP19.82■□□□□ 0.76
CYSTM1-201ENST00000261811 FAM207AQ9NSI2 230 aaPredicted RBP19.82■□□□□ 0.76
CYSTM1-201ENST00000261811 TRPM5Q9NZQ8 1165 aa19.82■□□□□ 0.76
CYSTM1-201ENST00000261811 LIMD1Q9UGP4 676 aa19.82■□□□□ 0.76
CYSTM1-201ENST00000261811 TSPAN16Q9UKR8 245 aa19.82■□□□□ 0.76
CYSTM1-201ENST00000261811 SETSIPP0DME0 302 aa19.81■□□□□ 0.76
CYSTM1-201ENST00000261811 GNA15P30679 374 aa19.81■□□□□ 0.76
CYSTM1-201ENST00000261811 CCR2P41597 374 aa19.81■□□□□ 0.76
CYSTM1-201ENST00000261811 ZNF132P52740 706 aa19.81■□□□□ 0.76
CYSTM1-201ENST00000261811 SLC5A3P53794 718 aa19.81■□□□□ 0.76
CYSTM1-201ENST00000261811 CACNA2D1P54289 1103 aa19.81■□□□□ 0.76
CYSTM1-201ENST00000261811 BST2Q10589 180 aaKnown RBP19.81■□□□□ 0.76
CYSTM1-201ENST00000261811 IFRD2Q12894 506 aaPredicted RBP19.81■□□□□ 0.76
CYSTM1-201ENST00000261811 GPR158Q5T848 1215 aa19.81■□□□□ 0.76
CYSTM1-201ENST00000261811 LCLAT1Q6UWP7 414 aa19.81■□□□□ 0.76
CYSTM1-201ENST00000261811 GAREM2Q75VX8 874 aa19.81■□□□□ 0.76
CYSTM1-201ENST00000261811 RNF135Q8IUD6 432 aa19.81■□□□□ 0.76
CYSTM1-201ENST00000261811 STKLD1Q8NE28 680 aa19.81■□□□□ 0.76
CYSTM1-201ENST00000261811 E2F7Q96AV8 911 aa19.81■□□□□ 0.76
CYSTM1-201ENST00000261811 SPAG5Q96R06 1193 aa19.81■□□□□ 0.76
CYSTM1-201ENST00000261811 STK33Q9BYT3 514 aa19.81■□□□□ 0.76
CYSTM1-201ENST00000261811 TASP1Q9H6P5 420 aa19.81■□□□□ 0.76
CYSTM1-201ENST00000261811 RNF225M0QZC1 329 aaPredicted RBP19.8■□□□□ 0.76
CYSTM1-201ENST00000261811 THAP12O43422 761 aa19.8■□□□□ 0.76
CYSTM1-201ENST00000261811 F11P03951 625 aa19.8■□□□□ 0.76
CYSTM1-201ENST00000261811 APBA1Q02410 837 aa19.8■□□□□ 0.76
CYSTM1-201ENST00000261811 DRAP1Q14919 205 aaPredicted RBP19.8■□□□□ 0.76
CYSTM1-201ENST00000261811 APTXQ7Z2E3 356 aaKnown RBP19.8■□□□□ 0.76
CYSTM1-201ENST00000261811 FMNL3Q8IVF7 1028 aa19.8■□□□□ 0.76
CYSTM1-201ENST00000261811 FBXO32Q969P5 355 aa19.8■□□□□ 0.76
CYSTM1-201ENST00000261811 IL21Q9HBE4 155 aa19.8■□□□□ 0.76
CYSTM1-201ENST00000261811 FHOD1Q9Y613 1164 aa19.8■□□□□ 0.76
CYSTM1-201ENST00000261811 SPTBN5Q9NRC6 3674 aaKnown RBP19.8■□□□□ 0.76
CYSTM1-201ENST00000261811 A0A1B0GTH6 734 aa19.79■□□□□ 0.76
CYSTM1-201ENST00000261811 O00370 1275 aa19.79■□□□□ 0.76
CYSTM1-201ENST00000261811 XPO1O14980 1071 aaKnown RBP19.79■□□□□ 0.76
CYSTM1-201ENST00000261811 BEST1O76090 585 aa19.79■□□□□ 0.76
CYSTM1-201ENST00000261811 GJA1P17302 382 aa19.79■□□□□ 0.76
CYSTM1-201ENST00000261811 PFKLP17858 780 aa19.79■□□□□ 0.76
CYSTM1-201ENST00000261811 BRD2P25440 801 aaKnown RBP19.79■□□□□ 0.76
CYSTM1-201ENST00000261811 AVPR1AP37288 418 aa19.79■□□□□ 0.76
CYSTM1-201ENST00000261811 UBASH3AP57075 661 aa19.79■□□□□ 0.76
CYSTM1-201ENST00000261811 POLR2FP61218 127 aaKnown RBP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms