RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 PGLYRP2Q96PD5 576 aa10.53□□□□□ -0.72
PALB2-201ENST00000261584 WWP1Q9H0M0 922 aa10.53□□□□□ -0.72
PALB2-201ENST00000261584 SEMA6AQ9H2E6 1030 aa10.53□□□□□ -0.72
PALB2-201ENST00000261584 RNPEPQ9H4A4 650 aa10.53□□□□□ -0.72
PALB2-201ENST00000261584 LRRC19Q9H756 370 aa10.53□□□□□ -0.72
PALB2-201ENST00000261584 COL20A1Q9P218 1284 aa10.53□□□□□ -0.72
PALB2-201ENST00000261584 CHD2O14647 1828 aaKnown RBP10.53□□□□□ -0.72
PALB2-201ENST00000261584 FRMPD4Q14CM0 1322 aa10.53□□□□□ -0.72
PALB2-201ENST00000261584 MYOCOSA0A1B0GUC4 107 aa10.53□□□□□ -0.72
PALB2-201ENST00000261584 FSCN2O14926 492 aa10.53□□□□□ -0.72
PALB2-201ENST00000261584 TBX10O75333 385 aa10.53□□□□□ -0.72
PALB2-201ENST00000261584 CALB1P05937 261 aa10.53□□□□□ -0.72
PALB2-201ENST00000261584 ASNSP08243 561 aa10.53□□□□□ -0.72
PALB2-201ENST00000261584 IL1R1P14778 569 aa10.53□□□□□ -0.72
PALB2-201ENST00000261584 NPR1P16066 1061 aa10.53□□□□□ -0.72
PALB2-201ENST00000261584 ANXA13P27216 316 aa10.53□□□□□ -0.72
PALB2-201ENST00000261584 GSTT1P30711 240 aa10.53□□□□□ -0.72
PALB2-201ENST00000261584 PGGT1BP53609 377 aa10.53□□□□□ -0.72
PALB2-201ENST00000261584 PRPSAP1Q14558 356 aa10.53□□□□□ -0.72
PALB2-201ENST00000261584 DBN1Q16643 649 aa10.53□□□□□ -0.72
PALB2-201ENST00000261584 COBLL1Q53SF7 1204 aa10.53□□□□□ -0.72
PALB2-201ENST00000261584 RIPOR1Q6ZS17 1223 aa10.53□□□□□ -0.72
PALB2-201ENST00000261584 PID1Q7Z2X4 250 aa10.53□□□□□ -0.72
PALB2-201ENST00000261584 NIM1KQ8IY84 436 aa10.53□□□□□ -0.72
PALB2-201ENST00000261584 UNC5BQ8IZJ1 945 aa10.53□□□□□ -0.72
PALB2-201ENST00000261584 SPATA6LQ8N4H0 392 aa10.53□□□□□ -0.72
PALB2-201ENST00000261584 CDKL2Q92772 493 aa10.53□□□□□ -0.72
PALB2-201ENST00000261584 PTPRN2Q92932 1015 aa10.53□□□□□ -0.72
PALB2-201ENST00000261584 MED10Q9BTT4 135 aa10.53□□□□□ -0.72
PALB2-201ENST00000261584 MRPL46Q9H2W6 279 aaKnown RBP10.53□□□□□ -0.72
PALB2-201ENST00000261584 PEX11AO75192 247 aa10.53□□□□□ -0.72
PALB2-201ENST00000261584 LMNAP02545 664 aaKnown RBP10.53□□□□□ -0.72
PALB2-201ENST00000261584 GRM1Q13255 1194 aa10.53□□□□□ -0.72
PALB2-201ENST00000261584 ITGA9Q13797 1035 aa10.53□□□□□ -0.72
PALB2-201ENST00000261584 TDRD10Q5VZ19 366 aaKnown RBP10.53□□□□□ -0.72
PALB2-201ENST00000261584 CRELD2Q6UXH1 353 aaPredicted RBP10.53□□□□□ -0.72
PALB2-201ENST00000261584 SAMD7Q7Z3H4 446 aa10.53□□□□□ -0.72
PALB2-201ENST00000261584 WRNIP1Q96S55 665 aa10.53□□□□□ -0.72
PALB2-201ENST00000261584 CAAP1Q9H8G2 361 aa10.53□□□□□ -0.72
PALB2-201ENST00000261584 ZNF302Q9NR11 478 aa10.53□□□□□ -0.72
PALB2-201ENST00000261584 KLHL8Q9P2G9 620 aaPredicted RBP10.53□□□□□ -0.72
PALB2-201ENST00000261584 AURKCQ9UQB9 309 aa10.53□□□□□ -0.72
PALB2-201ENST00000261584 LRRC37A3O60309 1634 aa10.53□□□□□ -0.72
PALB2-201ENST00000261584 NWD2Q9ULI1 1742 aa10.52□□□□□ -0.72
PALB2-201ENST00000261584 CST3P01034 146 aaPredicted RBP10.52□□□□□ -0.72
PALB2-201ENST00000261584 TPH1P17752 444 aa10.52□□□□□ -0.72
PALB2-201ENST00000261584 CCND2P30279 289 aa10.52□□□□□ -0.72
PALB2-201ENST00000261584 ADSSP30520 456 aa10.52□□□□□ -0.72
PALB2-201ENST00000261584 ABL2P42684 1182 aa10.52□□□□□ -0.72
PALB2-201ENST00000261584 CLK2P49760 499 aaKnown RBP10.52□□□□□ -0.72
PALB2-201ENST00000261584 SLC12A2P55011 1212 aa10.52□□□□□ -0.72
PALB2-201ENST00000261584 VCPP55072 806 aaKnown RBP10.52□□□□□ -0.72
PALB2-201ENST00000261584 DSG1Q02413 1049 aa10.52□□□□□ -0.72
PALB2-201ENST00000261584 NRF1Q16656 503 aa10.52□□□□□ -0.72
PALB2-201ENST00000261584 SH3PXD2AQ5TCZ1 1133 aa10.52□□□□□ -0.72
PALB2-201ENST00000261584 ABRAQ8N0Z2 381 aa10.52□□□□□ -0.72
PALB2-201ENST00000261584 ZNF483Q8TF39 744 aaPredicted RBP10.52□□□□□ -0.72
PALB2-201ENST00000261584 DCUN1D5Q9BTE7 237 aa10.52□□□□□ -0.72
PALB2-201ENST00000261584 PIF1Q9H611 641 aa10.52□□□□□ -0.72
PALB2-201ENST00000261584 C20orf96Q9NUD7 363 aaPredicted RBP10.52□□□□□ -0.72
PALB2-201ENST00000261584 GGA2Q9UJY4 613 aa10.52□□□□□ -0.72
PALB2-201ENST00000261584 MROH7Q68CQ1 1323 aa10.52□□□□□ -0.72
PALB2-201ENST00000261584 MYH7BA7E2Y1 1941 aa10.52□□□□□ -0.73
PALB2-201ENST00000261584 NDC80O14777 642 aa10.52□□□□□ -0.73
PALB2-201ENST00000261584 LIASO43766 372 aa10.52□□□□□ -0.73
PALB2-201ENST00000261584 CSPG5O95196 566 aa10.52□□□□□ -0.73
PALB2-201ENST00000261584 RFX1P22670 979 aa10.52□□□□□ -0.73
PALB2-201ENST00000261584 PSEN1P49768 467 aa10.52□□□□□ -0.73
PALB2-201ENST00000261584 GABPAQ06546 454 aa10.52□□□□□ -0.73
PALB2-201ENST00000261584 DUOXA2Q1HG44 320 aa10.52□□□□□ -0.73
PALB2-201ENST00000261584 MSS51Q4VC12 460 aa10.52□□□□□ -0.73
PALB2-201ENST00000261584 RALGPS1Q5JS13 557 aa10.52□□□□□ -0.73
PALB2-201ENST00000261584 ARHGAP27Q6ZUM4 889 aa10.52□□□□□ -0.73
PALB2-201ENST00000261584 MCPH1Q8NEM0 835 aa10.52□□□□□ -0.73
PALB2-201ENST00000261584 GRIP2Q9C0E4 1043 aa10.52□□□□□ -0.73
PALB2-201ENST00000261584 SIK2Q9H0K1 926 aa10.52□□□□□ -0.73
PALB2-201ENST00000261584 RPF1Q9H9Y2 349 aaKnown RBP10.52□□□□□ -0.73
PALB2-201ENST00000261584 ARHGEF3Q9NR81 526 aa10.52□□□□□ -0.73
PALB2-201ENST00000261584 NOCTQ9UK39 431 aaKnown RBP10.52□□□□□ -0.73
PALB2-201ENST00000261584 SNX9Q9Y5X1 595 aa10.52□□□□□ -0.73
PALB2-201ENST00000261584 KCPQ6ZWJ8 1503 aa10.52□□□□□ -0.73
PALB2-201ENST00000261584 CASZ1Q86V15 1759 aa10.52□□□□□ -0.73
PALB2-201ENST00000261584 ITGB3P05106 788 aa10.52□□□□□ -0.73
PALB2-201ENST00000261584 SNRPAP09012 282 aaKnown RBP10.52□□□□□ -0.73
PALB2-201ENST00000261584 SP100P23497 879 aaPredicted RBP10.52□□□□□ -0.73
PALB2-201ENST00000261584 RBL1P28749 1068 aa10.52□□□□□ -0.73
PALB2-201ENST00000261584 KRT76Q01546 638 aa10.52□□□□□ -0.73
PALB2-201ENST00000261584 POU5F1Q01860 360 aaKnown RBP10.52□□□□□ -0.73
PALB2-201ENST00000261584 CENPCQ03188 943 aa10.52□□□□□ -0.73
PALB2-201ENST00000261584 PDK4Q16654 411 aa10.52□□□□□ -0.73
PALB2-201ENST00000261584 DENND1BQ6P3S1 775 aa10.52□□□□□ -0.73
PALB2-201ENST00000261584 NLGN1Q8N2Q7 840 aa10.52□□□□□ -0.73
PALB2-201ENST00000261584 RIBC1Q8N443 379 aaPredicted RBP10.52□□□□□ -0.73
PALB2-201ENST00000261584 ZCCHC9Q8N567 271 aaKnown RBP10.52□□□□□ -0.73
PALB2-201ENST00000261584 RBM15BQ8NDT2 890 aaKnown RBP10.52□□□□□ -0.73
PALB2-201ENST00000261584 SYTL5Q8TDW5 730 aaPredicted RBP10.52□□□□□ -0.73
PALB2-201ENST00000261584 TMEM165Q9HC07 324 aa10.52□□□□□ -0.73
PALB2-201ENST00000261584 PRRC2BQ5JSZ5 2229 aaKnown RBP10.52□□□□□ -0.73
PALB2-201ENST00000261584 BTNL10A8MVZ5 291 aa10.51□□□□□ -0.73
PALB2-201ENST00000261584 KCNK1O00180 336 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms