RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 NAT14Q8WUY8 206 aa12.85□□□□□ -0.35
USP30-201ENST00000257548 MMP19Q99542 508 aa12.85□□□□□ -0.35
USP30-201ENST00000257548 SEMA6AQ9H2E6 1030 aa12.85□□□□□ -0.35
USP30-201ENST00000257548 COPS7BQ9H9Q2 264 aaPredicted RBP12.85□□□□□ -0.35
USP30-201ENST00000257548 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.85□□□□□ -0.35
USP30-201ENST00000257548 ARHGEF38Q9NXL2 777 aa12.85□□□□□ -0.35
USP30-201ENST00000257548 SLC24A2Q9UI40 661 aa12.85□□□□□ -0.35
USP30-201ENST00000257548 PLA2G4CQ9UP65 541 aa12.85□□□□□ -0.35
USP30-201ENST00000257548 COMMD3-BMI1R4GMX3 469 aa12.85□□□□□ -0.35
USP30-201ENST00000257548 MYH14Q7Z406 1995 aaKnown RBP12.84□□□□□ -0.35
USP30-201ENST00000257548 A8MXQ7 604 aa12.84□□□□□ -0.35
USP30-201ENST00000257548 ABLIM1O14639 778 aa12.84□□□□□ -0.35
USP30-201ENST00000257548 CCR3P51677 355 aa12.84□□□□□ -0.35
USP30-201ENST00000257548 PPP4CP60510 307 aa12.84□□□□□ -0.35
USP30-201ENST00000257548 ATP1A4Q13733 1029 aa12.84□□□□□ -0.35
USP30-201ENST00000257548 MORF4L2Q15014 288 aa12.84□□□□□ -0.35
USP30-201ENST00000257548 Q4G0T1 1027 aa12.84□□□□□ -0.35
USP30-201ENST00000257548 ANKRD22Q5VYY1 191 aa12.84□□□□□ -0.35
USP30-201ENST00000257548 ZFPM1Q8IX07 1006 aa12.84□□□□□ -0.35
USP30-201ENST00000257548 KBTBD2Q8IY47 623 aa12.84□□□□□ -0.35
USP30-201ENST00000257548 LENG1Q96BZ8 264 aaPredicted RBP12.84□□□□□ -0.35
USP30-201ENST00000257548 FAM210AQ96ND0 272 aa12.84□□□□□ -0.35
USP30-201ENST00000257548 TDRD3Q9H7E2 651 aaKnown RBP12.84□□□□□ -0.35
USP30-201ENST00000257548 THEGQ9P2T0 379 aa12.84□□□□□ -0.35
USP30-201ENST00000257548 MRPL11Q9Y3B7 192 aaKnown RBP12.84□□□□□ -0.35
USP30-201ENST00000257548 SMAPO00193 183 aa12.84□□□□□ -0.35
USP30-201ENST00000257548 RNASEH1O60930 286 aaKnown RBP12.84□□□□□ -0.35
USP30-201ENST00000257548 TCF4P15884 667 aa12.84□□□□□ -0.35
USP30-201ENST00000257548 ATP2B4P23634 1241 aa12.84□□□□□ -0.35
USP30-201ENST00000257548 TBL3Q12788 808 aaKnown RBP12.84□□□□□ -0.35
USP30-201ENST00000257548 WDR72Q3MJ13 1102 aa12.84□□□□□ -0.35
USP30-201ENST00000257548 TSHZ1Q6ZSZ6 1077 aa12.84□□□□□ -0.35
USP30-201ENST00000257548 DHDDSQ86SQ9 333 aa12.84□□□□□ -0.35
USP30-201ENST00000257548 TMEM35BQ8NCS4 154 aa12.84□□□□□ -0.35
USP30-201ENST00000257548 LIN28AQ9H9Z2 209 aaKnown RBP12.84□□□□□ -0.35
USP30-201ENST00000257548 CSPG5O95196 566 aa12.84□□□□□ -0.35
USP30-201ENST00000257548 NCKAP1LP55160 1127 aa12.84□□□□□ -0.35
USP30-201ENST00000257548 INHBEP58166 350 aa12.84□□□□□ -0.35
USP30-201ENST00000257548 FOLH1Q04609 750 aa12.84□□□□□ -0.35
USP30-201ENST00000257548 OR52E8Q6IFG1 317 aa12.84□□□□□ -0.35
USP30-201ENST00000257548 OTOP1Q7RTM1 612 aa12.84□□□□□ -0.35
USP30-201ENST00000257548 CDR2LQ86X02 465 aaPredicted RBP12.84□□□□□ -0.35
USP30-201ENST00000257548 THNSL1Q8IYQ7 743 aa12.84□□□□□ -0.35
USP30-201ENST00000257548 FAM71AQ8IYT1 594 aa12.84□□□□□ -0.35
USP30-201ENST00000257548 HACE1Q8IYU2 909 aa12.84□□□□□ -0.35
USP30-201ENST00000257548 CCNYL1Q8N7R7 359 aa12.84□□□□□ -0.35
USP30-201ENST00000257548 PPP1R16BQ96T49 567 aa12.84□□□□□ -0.35
USP30-201ENST00000257548 EBF4Q9BQW3 602 aa12.84□□□□□ -0.35
USP30-201ENST00000257548 UNKQ9C0B0 810 aaKnown RBP12.84□□□□□ -0.35
USP30-201ENST00000257548 PHACTR1Q9C0D0 580 aa12.84□□□□□ -0.35
USP30-201ENST00000257548 TUFT1Q9NNX1 390 aa12.84□□□□□ -0.35
USP30-201ENST00000257548 C20orf96Q9NUD7 363 aaPredicted RBP12.84□□□□□ -0.35
USP30-201ENST00000257548 HERC5Q9UII4 1024 aaKnown RBP12.84□□□□□ -0.35
USP30-201ENST00000257548 PRR12Q9ULL5 1215 aa12.84□□□□□ -0.35
USP30-201ENST00000257548 ACTL7BQ9Y614 415 aa12.84□□□□□ -0.35
USP30-201ENST00000257548 PARP4Q9UKK3 1724 aaKnown RBP12.83□□□□□ -0.35
USP30-201ENST00000257548 C15orf38-AP3S2A0A0A6YYH1 394 aa12.83□□□□□ -0.36
USP30-201ENST00000257548 SPDYE16A6NNV3 312 aaPredicted RBP12.83□□□□□ -0.36
USP30-201ENST00000257548 P4HBP07237 508 aaKnown RBP12.83□□□□□ -0.36
USP30-201ENST00000257548 KRT3P12035 628 aa12.83□□□□□ -0.36
USP30-201ENST00000257548 SMARCA1P28370 1054 aa12.83□□□□□ -0.36
USP30-201ENST00000257548 ABCG1P45844 678 aa12.83□□□□□ -0.36
USP30-201ENST00000257548 OR6B2Q6IFH4 312 aa12.83□□□□□ -0.36
USP30-201ENST00000257548 SPOCD1Q6ZMY3 1216 aa12.83□□□□□ -0.36
USP30-201ENST00000257548 ARPINQ7Z6K5 226 aa12.83□□□□□ -0.36
USP30-201ENST00000257548 MCUQ8NE86 351 aa12.83□□□□□ -0.36
USP30-201ENST00000257548 PDZD8Q8NEN9 1154 aa12.83□□□□□ -0.36
USP30-201ENST00000257548 POLR3CQ9BUI4 534 aaPredicted RBP12.83□□□□□ -0.36
USP30-201ENST00000257548 PAIP1Q9H074 479 aaKnown RBP12.83□□□□□ -0.36
USP30-201ENST00000257548 TMEM8AQ9HCN3 771 aa12.83□□□□□ -0.36
USP30-201ENST00000257548 PI4KBQ9UBF8 816 aa12.83□□□□□ -0.36
USP30-201ENST00000257548 UMODL1Q5DID0 1318 aa12.83□□□□□ -0.36
USP30-201ENST00000257548 SPATA31A5Q5VU36 1347 aa12.83□□□□□ -0.36
USP30-201ENST00000257548 SPATA31A7Q8IWB4 1347 aa12.83□□□□□ -0.36
USP30-201ENST00000257548 POLR2BP30876 1174 aaKnown RBP12.83□□□□□ -0.36
USP30-201ENST00000257548 ECE1P42892 770 aa12.83□□□□□ -0.36
USP30-201ENST00000257548 MTMR1Q13613 665 aa12.83□□□□□ -0.36
USP30-201ENST00000257548 MOGSQ13724 837 aa12.83□□□□□ -0.36
USP30-201ENST00000257548 VWA5B1Q5TIE3 1220 aa12.83□□□□□ -0.36
USP30-201ENST00000257548 KLC3Q6P597 504 aa12.83□□□□□ -0.36
USP30-201ENST00000257548 RBM17Q96I25 401 aaKnown RBP12.83□□□□□ -0.36
USP30-201ENST00000257548 MSTO1Q9BUK6 570 aa12.83□□□□□ -0.36
USP30-201ENST00000257548 XIRP1Q702N8 1843 aaKnown RBP12.83□□□□□ -0.36
USP30-201ENST00000257548 LAMB4A4D0S4 1761 aa12.83□□□□□ -0.36
USP30-201ENST00000257548 TBX3O15119 743 aa12.83□□□□□ -0.36
USP30-201ENST00000257548 TM9SF1O15321 606 aa12.83□□□□□ -0.36
USP30-201ENST00000257548 TMEM191BP0C7N4 346 aa12.83□□□□□ -0.36
USP30-201ENST00000257548 CHN2P52757 468 aa12.83□□□□□ -0.36
USP30-201ENST00000257548 VCPP55072 806 aaKnown RBP12.83□□□□□ -0.36
USP30-201ENST00000257548 ROR1Q01973 937 aa12.83□□□□□ -0.36
USP30-201ENST00000257548 TFDP3Q5H9I0 405 aa12.83□□□□□ -0.36
USP30-201ENST00000257548 CDKL2Q92772 493 aa12.83□□□□□ -0.36
USP30-201ENST00000257548 CATSPER2Q96P56 530 aa12.83□□□□□ -0.36
USP30-201ENST00000257548 SERPINI1Q99574 410 aa12.83□□□□□ -0.36
USP30-201ENST00000257548 KRT82Q9NSB4 513 aa12.83□□□□□ -0.36
USP30-201ENST00000257548 TSC22D4Q9Y3Q8 395 aa12.83□□□□□ -0.36
USP30-201ENST00000257548 ZHX2Q9Y6X8 837 aa12.83□□□□□ -0.36
USP30-201ENST00000257548 RNF103-CHMP3A0A140T963 221 aa12.82□□□□□ -0.36
USP30-201ENST00000257548 DCAF8L1A6NGE4 600 aa12.82□□□□□ -0.36
USP30-201ENST00000257548 K7ERI5 159 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms