RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 PIK3CAP42336 1068 aa4.34□□□□□ -1.72
UBE4A-201ENST00000252108 LIG4P49917 911 aa4.34□□□□□ -1.72
UBE4A-201ENST00000252108 MED21Q13503 144 aa4.34□□□□□ -1.72
UBE4A-201ENST00000252108 SNX1Q13596 522 aa4.34□□□□□ -1.72
UBE4A-201ENST00000252108 ITGA9Q13797 1035 aa4.34□□□□□ -1.72
UBE4A-201ENST00000252108 KCTD19Q17RG1 926 aaPredicted RBP4.34□□□□□ -1.72
UBE4A-201ENST00000252108 PKDCCQ504Y2 493 aa4.34□□□□□ -1.72
UBE4A-201ENST00000252108 CCDC157Q569K6 752 aa4.34□□□□□ -1.72
UBE4A-201ENST00000252108 FAM47EQ6ZV65 393 aa4.34□□□□□ -1.72
UBE4A-201ENST00000252108 SV2AQ7L0J3 742 aa4.34□□□□□ -1.72
UBE4A-201ENST00000252108 TMPRSS6Q8IU80 811 aa4.34□□□□□ -1.72
UBE4A-201ENST00000252108 KLHDC8BQ8IXV7 354 aa4.34□□□□□ -1.72
UBE4A-201ENST00000252108 KATNAL2Q8IYT4 538 aa4.34□□□□□ -1.72
UBE4A-201ENST00000252108 KIAA0319LQ8IZA0 1049 aa4.34□□□□□ -1.72
UBE4A-201ENST00000252108 TAS1R2Q8TE23 839 aa4.34□□□□□ -1.72
UBE4A-201ENST00000252108 POMGNT1Q8WZA1 660 aa4.34□□□□□ -1.72
UBE4A-201ENST00000252108 L3MBTL3Q96JM7 780 aaPredicted RBP4.34□□□□□ -1.72
UBE4A-201ENST00000252108 BCO2Q9BYV7 579 aa4.34□□□□□ -1.72
UBE4A-201ENST00000252108 PORCNQ9H237 461 aa4.34□□□□□ -1.72
UBE4A-201ENST00000252108 TMEM134Q9H6X4 195 aa4.34□□□□□ -1.72
UBE4A-201ENST00000252108 GPAMQ9HCL2 828 aa4.34□□□□□ -1.72
UBE4A-201ENST00000252108 KMT5AQ9NQR1 393 aa4.34□□□□□ -1.72
UBE4A-201ENST00000252108 CYTH4Q9UIA0 394 aa4.34□□□□□ -1.72
UBE4A-201ENST00000252108 EFR3BQ9Y2G0 817 aa4.34□□□□□ -1.72
UBE4A-201ENST00000252108 SNCAIPQ9Y6H5 919 aa4.34□□□□□ -1.72
UBE4A-201ENST00000252108 DNALI1O14645 258 aaPredicted RBP4.33□□□□□ -1.72
UBE4A-201ENST00000252108 LSM8O95777 96 aaKnown RBP4.33□□□□□ -1.72
UBE4A-201ENST00000252108 DLATP10515 647 aaKnown RBP4.33□□□□□ -1.72
UBE4A-201ENST00000252108 GJC1P36383 396 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 MAGEA6P43360 314 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 GABRB2P47870 512 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 KPNA2P52292 529 aaKnown RBP4.33□□□□□ -1.72
UBE4A-201ENST00000252108 BACE1P56817 501 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 PSMC5P62195 406 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 OCRLQ01968 901 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 DSG1Q02413 1049 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 C1QBPQ07021 282 aaKnown RBP4.33□□□□□ -1.72
UBE4A-201ENST00000252108 LRRC14Q15048 493 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 FAM47CQ5HY64 1035 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 TRNP1Q6NT89 227 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 EXOC3L1Q86VI1 746 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 MCOLN2Q8IZK6 566 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 NLRP7Q8WX94 980 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 KHSRPQ92945 711 aaKnown RBP eCLIP4.33□□□□□ -1.72
UBE4A-201ENST00000252108 MCMBPQ9BTE3 642 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 CCDC68Q9H2F9 335 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 MANSC1Q9H8J5 431 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 DMAP1Q9NPF5 467 aaPredicted RBP4.33□□□□□ -1.72
UBE4A-201ENST00000252108 ABCF3Q9NUQ8 709 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 GJD2Q9UKL4 321 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 PCDHGC3Q9UN70 934 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 TRIM33Q9UPN9 1127 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 NAALADL1Q9UQQ1 740 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 COMMD3-BMI1R4GMX3 469 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 ZNF106Q9H2Y7 1883 aaKnown RBP4.33□□□□□ -1.72
UBE4A-201ENST00000252108 ATF7P17544 494 aaPredicted RBP4.33□□□□□ -1.72
UBE4A-201ENST00000252108 TNNI1P19237 187 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 PAX7P23759 505 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 HOXC8P31273 242 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 PSEN1P49768 467 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 SEPT6Q14141 434 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 SNRNP35Q16560 246 aaKnown RBP4.33□□□□□ -1.72
UBE4A-201ENST00000252108 MIS18BP1Q6P0N0 1132 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 GPIHBP1Q8IV16 184 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 GPD1LQ8N335 351 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 RDH13Q8NBN7 331 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 PRDM16Q9HAZ2 1276 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 NINJ2Q9NZG7 142 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 TBK1Q9UHD2 729 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 USTQ9Y2C2 406 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 R3HDM2Q9Y2K5 976 aaKnown RBP4.33□□□□□ -1.72
UBE4A-201ENST00000252108 LRRC42Q9Y546 428 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 PCDHB4Q9Y5E5 795 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 EVPLQ92817 2033 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 CENPFP49454 3210 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 GBF1Q92538 1859 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 CCDC160A6NGH7 325 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 ARHGAP42A6NI28 874 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 WDR64B1ANS9 1081 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 CLDN3O15551 220 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 H2AFYO75367 372 aaKnown RBP4.33□□□□□ -1.72
UBE4A-201ENST00000252108 SMNDC1O75940 238 aaKnown RBP eCLIP4.33□□□□□ -1.72
UBE4A-201ENST00000252108 STAU1O95793 577 aaKnown RBP4.33□□□□□ -1.72
UBE4A-201ENST00000252108 HOXC6P09630 235 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 GLRA2P23416 452 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 STIP1P31948 543 aaKnown RBP4.33□□□□□ -1.72
UBE4A-201ENST00000252108 ESRRGP62508 458 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 DNAJC3Q13217 504 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 HIC1Q14526 733 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 GNPTABQ3T906 1256 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 TMEM259Q4ZIN3 620 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 XKR9Q5GH70 373 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 ZBTB41Q5SVQ8 909 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 TLDC1Q6P9B6 456 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 NET1Q7Z628 596 aaPredicted RBP4.33□□□□□ -1.72
UBE4A-201ENST00000252108 LCA5Q86VQ0 697 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 CCNJLQ8IV13 435 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 THNSL1Q8IYQ7 743 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 TTLL6Q8N841 843 aa4.33□□□□□ -1.72
UBE4A-201ENST00000252108 ENDOVQ8N8Q3 282 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms