RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 GDF10P55107 478 aa15.47■□□□□ 0.07
MBD4-201ENST00000249910 EIF3BP55884 814 aaKnown RBP15.47■□□□□ 0.07
MBD4-201ENST00000249910 MMRN1Q13201 1228 aa15.47■□□□□ 0.07
MBD4-201ENST00000249910 CCDC38Q502W7 563 aa15.47■□□□□ 0.07
MBD4-201ENST00000249910 IZUMO3Q5VZ72 239 aa15.47■□□□□ 0.07
MBD4-201ENST00000249910 NT5DC4Q86YG4 428 aa15.47■□□□□ 0.07
MBD4-201ENST00000249910 KCTD6Q8NC69 237 aa15.47■□□□□ 0.07
MBD4-201ENST00000249910 ACTL9Q8TC94 416 aa15.47■□□□□ 0.07
MBD4-201ENST00000249910 RXFP2Q8WXD0 754 aa15.47■□□□□ 0.07
MBD4-201ENST00000249910 FAXDC2Q96IV6 333 aa15.47■□□□□ 0.07
MBD4-201ENST00000249910 CTSHP09668 335 aa15.46■□□□□ 0.07
MBD4-201ENST00000249910 CCDC130P13994 396 aa15.46■□□□□ 0.07
MBD4-201ENST00000249910 KDELR1P24390 212 aa15.46■□□□□ 0.07
MBD4-201ENST00000249910 CCT5P48643 541 aa15.46■□□□□ 0.07
MBD4-201ENST00000249910 FBXO47Q5MNV8 452 aa15.46■□□□□ 0.07
MBD4-201ENST00000249910 UBXN11Q5T124 520 aa15.46■□□□□ 0.07
MBD4-201ENST00000249910 TWF2Q6IBS0 349 aaKnown RBP15.46■□□□□ 0.07
MBD4-201ENST00000249910 FNIP1Q8TF40 1166 aa15.46■□□□□ 0.07
MBD4-201ENST00000249910 CLEC4CQ8WTT0 213 aa15.46■□□□□ 0.07
MBD4-201ENST00000249910 ADAM7Q9H2U9 754 aa15.46■□□□□ 0.07
MBD4-201ENST00000249910 CNTN3Q9P232 1028 aa15.46■□□□□ 0.07
MBD4-201ENST00000249910 WDR35Q9P2L0 1181 aa15.46■□□□□ 0.07
MBD4-201ENST00000249910 SLC12A6Q9UHW9 1150 aa15.46■□□□□ 0.07
MBD4-201ENST00000249910 IPPQ9Y573 584 aa15.46■□□□□ 0.07
MBD4-201ENST00000249910 SGK1O00141 431 aa15.46■□□□□ 0.07
MBD4-201ENST00000249910 KIF1CO43896 1103 aaKnown RBP15.46■□□□□ 0.07
MBD4-201ENST00000249910 RPS6KA5O75582 802 aa15.46■□□□□ 0.07
MBD4-201ENST00000249910 RNF8O76064 485 aa15.46■□□□□ 0.07
MBD4-201ENST00000249910 ADORA2BP29275 332 aa15.46■□□□□ 0.07
MBD4-201ENST00000249910 CDC42EP1Q00587 391 aa15.46■□□□□ 0.07
MBD4-201ENST00000249910 OTUD4Q01804 1114 aaKnown RBP15.46■□□□□ 0.07
MBD4-201ENST00000249910 GPS1Q13098 491 aa15.46■□□□□ 0.07
MBD4-201ENST00000249910 HADHQ16836 314 aaKnown RBP15.46■□□□□ 0.07
MBD4-201ENST00000249910 SCYL2Q6P3W7 929 aa15.46■□□□□ 0.07
MBD4-201ENST00000249910 POLNQ7Z5Q5 900 aa15.46■□□□□ 0.07
MBD4-201ENST00000249910 WNT8BQ93098 351 aa15.46■□□□□ 0.07
MBD4-201ENST00000249910 APBA2Q99767 749 aa15.46■□□□□ 0.07
MBD4-201ENST00000249910 DDX56Q9NY93 547 aaKnown RBP15.46■□□□□ 0.07
MBD4-201ENST00000249910 CTNNAL1Q9UBT7 734 aa15.46■□□□□ 0.07
MBD4-201ENST00000249910 C2CD4BA6NLJ0 364 aa15.45■□□□□ 0.06
MBD4-201ENST00000249910 MAP3K6O95382 1288 aa15.45■□□□□ 0.06
MBD4-201ENST00000249910 STAU1O95793 577 aaKnown RBP15.45■□□□□ 0.06
MBD4-201ENST00000249910 TFE3P19532 575 aaPredicted RBP15.45■□□□□ 0.06
MBD4-201ENST00000249910 TRIM32Q13049 653 aa15.45■□□□□ 0.06
MBD4-201ENST00000249910 OASLQ15646 514 aaKnown RBP15.45■□□□□ 0.06
MBD4-201ENST00000249910 SYDE1Q6ZW31 735 aaPredicted RBP15.45■□□□□ 0.06
MBD4-201ENST00000249910 SMG8Q8ND04 991 aaKnown RBP15.45■□□□□ 0.06
MBD4-201ENST00000249910 KBTBD7Q8WVZ9 684 aa15.45■□□□□ 0.06
MBD4-201ENST00000249910 OSBPL7Q9BZF2 842 aa15.45■□□□□ 0.06
MBD4-201ENST00000249910 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.45■□□□□ 0.06
MBD4-201ENST00000249910 KPNA7A9QM74 516 aa15.45■□□□□ 0.06
MBD4-201ENST00000249910 GOLGA8MH3BSY2 632 aa15.45■□□□□ 0.06
MBD4-201ENST00000249910 KRT7P08729 469 aa15.45■□□□□ 0.06
MBD4-201ENST00000249910 ZNF143P52747 638 aaPredicted RBP15.45■□□□□ 0.06
MBD4-201ENST00000249910 PPP2R2AP63151 447 aa15.45■□□□□ 0.06
MBD4-201ENST00000249910 SPDYCQ5MJ68 293 aa15.45■□□□□ 0.06
MBD4-201ENST00000249910 EMC10Q5UCC4 262 aa15.45■□□□□ 0.06
MBD4-201ENST00000249910 CYP4F22Q6NT55 531 aa15.45■□□□□ 0.06
MBD4-201ENST00000249910 ALLCQ8N6M5 410 aa15.45■□□□□ 0.06
MBD4-201ENST00000249910 GPATCH11Q8N954 259 aa15.45■□□□□ 0.06
MBD4-201ENST00000249910 LRRN4Q8WUT4 740 aa15.45■□□□□ 0.06
MBD4-201ENST00000249910 SLC35F5Q8WV83 523 aa15.45■□□□□ 0.06
MBD4-201ENST00000249910 NGRNQ9NPE2 291 aaKnown RBP15.45■□□□□ 0.06
MBD4-201ENST00000249910 GPATCH2LQ9NWQ4 482 aa15.45■□□□□ 0.06
MBD4-201ENST00000249910 UBQLN1Q9UMX0 589 aaKnown RBP15.45■□□□□ 0.06
MBD4-201ENST00000249910 GABRQQ9UN88 632 aa15.45■□□□□ 0.06
MBD4-201ENST00000249910 PIRO00625 290 aa15.44■□□□□ 0.06
MBD4-201ENST00000249910 RASGRF2O14827 1237 aa15.44■□□□□ 0.06
MBD4-201ENST00000249910 RGS16O15492 202 aaPredicted RBP15.44■□□□□ 0.06
MBD4-201ENST00000249910 PAPSS1O43252 624 aaPredicted RBP15.44■□□□□ 0.06
MBD4-201ENST00000249910 PECAM1P16284 738 aaPredicted RBP15.44■□□□□ 0.06
MBD4-201ENST00000249910 VCPP55072 806 aaKnown RBP15.44■□□□□ 0.06
MBD4-201ENST00000249910 COPS2P61201 443 aa15.44■□□□□ 0.06
MBD4-201ENST00000249910 PKDCCQ504Y2 493 aa15.44■□□□□ 0.06
MBD4-201ENST00000249910 FAM47CQ5HY64 1035 aa15.44■□□□□ 0.06
MBD4-201ENST00000249910 AGBL2Q5U5Z8 902 aa15.44■□□□□ 0.06
MBD4-201ENST00000249910 CAPN12Q6ZSI9 719 aa15.44■□□□□ 0.06
MBD4-201ENST00000249910 HOOK3Q86VS8 718 aa15.44■□□□□ 0.06
MBD4-201ENST00000249910 FAM228AQ86W67 206 aa15.44■□□□□ 0.06
MBD4-201ENST00000249910 MAGEB5Q9BZ81 275 aa15.44■□□□□ 0.06
MBD4-201ENST00000249910 LCMT1Q9UIC8 334 aa15.44■□□□□ 0.06
MBD4-201ENST00000249910 ZSWIM8A7E2V4 1837 aa15.44■□□□□ 0.06
MBD4-201ENST00000249910 NDUFAB1O14561 156 aa15.44■□□□□ 0.06
MBD4-201ENST00000249910 ATP2C2O75185 946 aa15.44■□□□□ 0.06
MBD4-201ENST00000249910 TTC4O95801 387 aa15.44■□□□□ 0.06
MBD4-201ENST00000249910 TRUB2O95900 331 aaKnown RBP15.44■□□□□ 0.06
MBD4-201ENST00000249910 GPD1P21695 349 aa15.44■□□□□ 0.06
MBD4-201ENST00000249910 GNL1P36915 607 aaPredicted RBP15.44■□□□□ 0.06
MBD4-201ENST00000249910 CRYBB1P53674 252 aaPredicted RBP15.44■□□□□ 0.06
MBD4-201ENST00000249910 ATXN1P54253 815 aaKnown RBP15.44■□□□□ 0.06
MBD4-201ENST00000249910 CDH6P55285 790 aa15.44■□□□□ 0.06
MBD4-201ENST00000249910 GAD2Q05329 585 aa15.44■□□□□ 0.06
MBD4-201ENST00000249910 FASTKD3Q14CZ7 662 aaKnown RBP15.44■□□□□ 0.06
MBD4-201ENST00000249910 CCDC14Q49A88 953 aa15.44■□□□□ 0.06
MBD4-201ENST00000249910 SYCP2LQ5T4T6 812 aa15.44■□□□□ 0.06
MBD4-201ENST00000249910 NPNTQ6UXI9 565 aa15.44■□□□□ 0.06
MBD4-201ENST00000249910 CYP4V2Q6ZWL3 525 aaPredicted RBP15.44■□□□□ 0.06
MBD4-201ENST00000249910 LRRC52Q8N7C0 313 aa15.44■□□□□ 0.06
MBD4-201ENST00000249910 KHSRPQ92945 711 aaKnown RBP eCLIP15.44■□□□□ 0.06
MBD4-201ENST00000249910 TLCD1Q96CP7 247 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms