RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 ZACNQ401N2 412 aa17.23■□□□□ 0.35
CLPP-201ENST00000245816 ARHGAP15Q53QZ3 475 aa17.23■□□□□ 0.35
CLPP-201ENST00000245816 ZC3H3Q8IXZ2 948 aaKnown RBP17.23■□□□□ 0.35
CLPP-201ENST00000245816 YAF2Q8IY57 180 aa17.23■□□□□ 0.35
CLPP-201ENST00000245816 CELF5Q8N6W0 485 aaKnown RBP17.23■□□□□ 0.35
CLPP-201ENST00000245816 TRIML1Q8N9V2 468 aa17.23■□□□□ 0.35
CLPP-201ENST00000245816 TAF4BQ92750 862 aa17.23■□□□□ 0.35
CLPP-201ENST00000245816 TRMT2BQ96GJ1 504 aaKnown RBP17.23■□□□□ 0.35
CLPP-201ENST00000245816 SDCBP2Q9H190 292 aa17.23■□□□□ 0.35
CLPP-201ENST00000245816 ZSCAN32Q9NX65 697 aa17.23■□□□□ 0.35
CLPP-201ENST00000245816 PSMA7O14818 248 aa17.22■□□□□ 0.35
CLPP-201ENST00000245816 NCAM2O15394 837 aa17.22■□□□□ 0.35
CLPP-201ENST00000245816 PHACTR2O75167 634 aa17.22■□□□□ 0.35
CLPP-201ENST00000245816 CSH1P0DML2 217 aa17.22■□□□□ 0.35
CLPP-201ENST00000245816 CSH2P0DML3 217 aa17.22■□□□□ 0.35
CLPP-201ENST00000245816 KRT13P13646 458 aa17.22■□□□□ 0.35
CLPP-201ENST00000245816 BDNFP23560 247 aa17.22■□□□□ 0.35
CLPP-201ENST00000245816 MAGEA11P43364 429 aa17.22■□□□□ 0.35
CLPP-201ENST00000245816 KPNA1P52294 538 aaPredicted RBP17.22■□□□□ 0.35
CLPP-201ENST00000245816 SRSF5Q13243 272 aaKnown RBP17.22■□□□□ 0.35
CLPP-201ENST00000245816 MAPRE1Q15691 268 aaKnown RBP17.22■□□□□ 0.35
CLPP-201ENST00000245816 SGSM1Q2NKQ1 1148 aa17.22■□□□□ 0.35
CLPP-201ENST00000245816 TDRD10Q5VZ19 366 aaKnown RBP17.22■□□□□ 0.35
CLPP-201ENST00000245816 FSTL4Q6MZW2 842 aa17.22■□□□□ 0.35
CLPP-201ENST00000245816 SCN4BQ8IWT1 228 aa17.22■□□□□ 0.35
CLPP-201ENST00000245816 FAM186BQ8IYM0 893 aa17.22■□□□□ 0.35
CLPP-201ENST00000245816 KIAA2013Q8IYS2 634 aa17.22■□□□□ 0.35
CLPP-201ENST00000245816 CSGALNACT1Q8TDX6 532 aa17.22■□□□□ 0.35
CLPP-201ENST00000245816 RMDN1Q96DB5 314 aa17.22■□□□□ 0.35
CLPP-201ENST00000245816 PCED1BQ96HM7 432 aa17.22■□□□□ 0.35
CLPP-201ENST00000245816 EPC1Q9H2F5 836 aa17.22■□□□□ 0.35
CLPP-201ENST00000245816 EBF3Q9H4W6 596 aa17.22■□□□□ 0.35
CLPP-201ENST00000245816 C8orf33Q9H7E9 229 aaPredicted RBP17.22■□□□□ 0.35
CLPP-201ENST00000245816 TDP1Q9NUW8 608 aa17.22■□□□□ 0.35
CLPP-201ENST00000245816 MAN1B1Q9UKM7 699 aa17.22■□□□□ 0.35
CLPP-201ENST00000245816 CDH9Q9ULB4 789 aa17.22■□□□□ 0.35
CLPP-201ENST00000245816 PCDHGA2Q9Y5H1 932 aa17.22■□□□□ 0.35
CLPP-201ENST00000245816 DPYSL4O14531 572 aa17.21■□□□□ 0.35
CLPP-201ENST00000245816 CDH8P55286 799 aa17.21■□□□□ 0.35
CLPP-201ENST00000245816 MORC3Q14149 939 aa17.21■□□□□ 0.35
CLPP-201ENST00000245816 WDR72Q3MJ13 1102 aa17.21■□□□□ 0.35
CLPP-201ENST00000245816 PAQR9Q6ZVX9 377 aa17.21■□□□□ 0.35
CLPP-201ENST00000245816 SV2AQ7L0J3 742 aa17.21■□□□□ 0.35
CLPP-201ENST00000245816 RALGPS2Q86X27 583 aaPredicted RBP17.21■□□□□ 0.35
CLPP-201ENST00000245816 SPATA2LQ8IUW3 424 aaPredicted RBP17.21■□□□□ 0.35
CLPP-201ENST00000245816 SMYD4Q8IYR2 804 aaPredicted RBP17.21■□□□□ 0.35
CLPP-201ENST00000245816 FUBP3Q96I24 572 aaKnown RBP eCLIP17.21■□□□□ 0.35
CLPP-201ENST00000245816 FAXDC2Q96IV6 333 aa17.21■□□□□ 0.35
CLPP-201ENST00000245816 CEP295NLQ96MC4 621 aa17.21■□□□□ 0.35
CLPP-201ENST00000245816 CLDN5O00501 218 aa17.2■□□□□ 0.34
CLPP-201ENST00000245816 SLC16A3O15427 465 aaKnown RBP17.2■□□□□ 0.34
CLPP-201ENST00000245816 HRO43593 1189 aa17.2■□□□□ 0.34
CLPP-201ENST00000245816 STX10O60499 249 aa17.2■□□□□ 0.34
CLPP-201ENST00000245816 P4HA1P13674 534 aa17.2■□□□□ 0.34
CLPP-201ENST00000245816 PTMSP20962 102 aa17.2■□□□□ 0.34
CLPP-201ENST00000245816 RPL10AP62906 217 aaKnown RBP17.2■□□□□ 0.34
CLPP-201ENST00000245816 TNNC1P63316 161 aa17.2■□□□□ 0.34
CLPP-201ENST00000245816 BIRC3Q13489 604 aa17.2■□□□□ 0.34
CLPP-201ENST00000245816 NCOA4Q13772 614 aa17.2■□□□□ 0.34
CLPP-201ENST00000245816 ZNF77Q15935 545 aa17.2■□□□□ 0.34
CLPP-201ENST00000245816 TAF12Q16514 161 aa17.2■□□□□ 0.34
CLPP-201ENST00000245816 MDH1BQ5I0G3 518 aa17.2■□□□□ 0.34
CLPP-201ENST00000245816 ZC3H14Q6PJT7 736 aaKnown RBP17.2■□□□□ 0.34
CLPP-201ENST00000245816 SPEM1Q8N4L4 309 aa17.2■□□□□ 0.34
CLPP-201ENST00000245816 ARL14EPQ8N8R7 260 aaPredicted RBP17.2■□□□□ 0.34
CLPP-201ENST00000245816 MYCBPAPQ8TBZ2 947 aa17.2■□□□□ 0.34
CLPP-201ENST00000245816 RUBCNQ92622 972 aa17.2■□□□□ 0.34
CLPP-201ENST00000245816 MMS19Q96T76 1030 aa17.2■□□□□ 0.34
CLPP-201ENST00000245816 B3GNT5Q9BYG0 378 aa17.2■□□□□ 0.34
CLPP-201ENST00000245816 LINC00597Q9H2U6 94 aa17.2■□□□□ 0.34
CLPP-201ENST00000245816 SMYD3Q9H7B4 428 aa17.2■□□□□ 0.34
CLPP-201ENST00000245816 PARD6AQ9NPB6 346 aa17.2■□□□□ 0.34
CLPP-201ENST00000245816 KIAA1468Q9P260 1216 aa17.2■□□□□ 0.34
CLPP-201ENST00000245816 MAGEC2Q9UBF1 373 aaPredicted RBP17.2■□□□□ 0.34
CLPP-201ENST00000245816 ATG2BQ96BY7 2078 aa17.2■□□□□ 0.34
CLPP-201ENST00000245816 ZNF638Q14966 1978 aaKnown RBP17.2■□□□□ 0.34
CLPP-201ENST00000245816 CHURC1-FNTBB4DL54 471 aa17.19■□□□□ 0.34
CLPP-201ENST00000245816 EPB41P11171 864 aaKnown RBP17.19■□□□□ 0.34
CLPP-201ENST00000245816 PTPN1P18031 435 aaKnown RBP17.19■□□□□ 0.34
CLPP-201ENST00000245816 DDX6P26196 483 aaKnown RBP eCLIP17.19■□□□□ 0.34
CLPP-201ENST00000245816 GNL1P36915 607 aaPredicted RBP17.19■□□□□ 0.34
CLPP-201ENST00000245816 RAP1GAPP47736 663 aa17.19■□□□□ 0.34
CLPP-201ENST00000245816 FNTBP49356 437 aa17.19■□□□□ 0.34
CLPP-201ENST00000245816 USP4Q13107 963 aa17.19■□□□□ 0.34
CLPP-201ENST00000245816 RUNX3Q13761 415 aa17.19■□□□□ 0.34
CLPP-201ENST00000245816 ZNF268Q14587 947 aaPredicted RBP17.19■□□□□ 0.34
CLPP-201ENST00000245816 GAB4Q2WGN9 574 aa17.19■□□□□ 0.34
CLPP-201ENST00000245816 ITPRIPL2Q3MIP1 535 aa17.19■□□□□ 0.34
CLPP-201ENST00000245816 TMEM196Q5HYL7 178 aa17.19■□□□□ 0.34
CLPP-201ENST00000245816 ANKRD40Q6AI12 368 aa17.19■□□□□ 0.34
CLPP-201ENST00000245816 ERCC4Q92889 916 aaPredicted RBP17.19■□□□□ 0.34
CLPP-201ENST00000245816 SPATA17Q96L03 361 aa17.19■□□□□ 0.34
CLPP-201ENST00000245816 CEP63Q96MT8 703 aa17.19■□□□□ 0.34
CLPP-201ENST00000245816 ZNF518BQ9C0D4 1074 aa17.19■□□□□ 0.34
CLPP-201ENST00000245816 RNF38Q9H0F5 515 aa17.19■□□□□ 0.34
CLPP-201ENST00000245816 SMG5Q9UPR3 1016 aaKnown RBP17.19■□□□□ 0.34
CLPP-201ENST00000245816 BICDL2A1A5D9 508 aa17.18■□□□□ 0.34
CLPP-201ENST00000245816 SOBPA7XYQ1 873 aa17.18■□□□□ 0.34
CLPP-201ENST00000245816 F8VP50 259 aa17.18■□□□□ 0.34
CLPP-201ENST00000245816 PAPSS2O95340 614 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms