RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 KLHL23Q8NBE8 558 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 L3MBTL3Q96JM7 780 aaPredicted RBP12.03□□□□□ -0.48
SOX9-201ENST00000245479 PDGFCQ9NRA1 345 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 UBE4BO95155 1302 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 MCF2LO15068 1137 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 ITGB3P05106 788 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 PRKCBP05771 671 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 ZNF286BP0CG31 522 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 CDH6P55285 790 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 CCDC14Q49A88 953 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 HOMEZQ8IX15 550 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 ZNF606Q8WXB4 792 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 RBM41Q96IZ5 413 aaKnown RBP12.03□□□□□ -0.48
SOX9-201ENST00000245479 ZMAT2Q96NC0 199 aaKnown RBP12.03□□□□□ -0.48
SOX9-201ENST00000245479 FAM111AQ96PZ2 611 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 ARHGEF3Q9NR81 526 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 NDUFA13Q9P0J0 144 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 PCDHB2Q9Y5E7 798 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 MYH11P35749 1972 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 ZNF536O15090 1300 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 NPTXRO95502 500 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 CLPTM1O96005 669 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 KRT3P12035 628 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 JAM2P57087 298 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 ART3Q13508 389 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 XKR3Q5GH77 459 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 PCNX4Q63HM2 1172 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 DPP9Q86TI2 863 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 HACE1Q8IYU2 909 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 PSPC1Q8WXF1 523 aaKnown RBP12.03□□□□□ -0.48
SOX9-201ENST00000245479 PPP2R3CQ969Q6 453 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 AGAP3Q96P47 875 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 LPIN3Q9BQK8 851 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 SIKE1Q9BRV8 207 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 HERPUD2Q9BSE4 406 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 NINJ2Q9NZG7 142 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 IL1RAPL1Q9NZN1 696 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 SNX9Q9Y5X1 595 aa12.03□□□□□ -0.48
SOX9-201ENST00000245479 N4BP2Q86UW6 1770 aaPredicted RBP12.02□□□□□ -0.48
SOX9-201ENST00000245479 DHX15O43143 795 aaKnown RBP12.02□□□□□ -0.48
SOX9-201ENST00000245479 TPBGLP0DKB5 382 aa12.02□□□□□ -0.48
SOX9-201ENST00000245479 ATXN3P54252 364 aaPredicted RBP12.02□□□□□ -0.48
SOX9-201ENST00000245479 GAD2Q05329 585 aa12.02□□□□□ -0.48
SOX9-201ENST00000245479 CUL2Q13617 745 aa12.02□□□□□ -0.48
SOX9-201ENST00000245479 ZNF667Q5HYK9 610 aa12.02□□□□□ -0.48
SOX9-201ENST00000245479 ANO7Q6IWH7 933 aa12.02□□□□□ -0.48
SOX9-201ENST00000245479 IYDQ6PHW0 289 aa12.02□□□□□ -0.48
SOX9-201ENST00000245479 TMEM192Q8IY95 271 aa12.02□□□□□ -0.48
SOX9-201ENST00000245479 MCOLN2Q8IZK6 566 aa12.02□□□□□ -0.48
SOX9-201ENST00000245479 GALNT4Q8N4A0 578 aa12.02□□□□□ -0.48
SOX9-201ENST00000245479 TMEM120AQ9BXJ8 343 aa12.02□□□□□ -0.48
SOX9-201ENST00000245479 DENND2DQ9H6A0 471 aaPredicted RBP12.02□□□□□ -0.48
SOX9-201ENST00000245479 WFS1O76024 890 aa12.02□□□□□ -0.49
SOX9-201ENST00000245479 RFX1P22670 979 aa12.02□□□□□ -0.49
SOX9-201ENST00000245479 SFNP31947 248 aa12.02□□□□□ -0.49
SOX9-201ENST00000245479 DRG2P55039 364 aaKnown RBP12.02□□□□□ -0.49
SOX9-201ENST00000245479 LBRQ14739 615 aaKnown RBP12.02□□□□□ -0.49
SOX9-201ENST00000245479 RASA2Q15283 850 aa12.02□□□□□ -0.49
SOX9-201ENST00000245479 TAF5Q15542 800 aa12.02□□□□□ -0.49
SOX9-201ENST00000245479 PKN2Q16513 984 aaKnown RBP12.02□□□□□ -0.49
SOX9-201ENST00000245479 KIZQ2M2Z5 673 aa12.02□□□□□ -0.49
SOX9-201ENST00000245479 PAN2Q504Q3 1202 aaKnown RBP12.02□□□□□ -0.49
SOX9-201ENST00000245479 EFCAB12Q6NXP0 572 aa12.02□□□□□ -0.49
SOX9-201ENST00000245479 NPNTQ6UXI9 565 aa12.02□□□□□ -0.49
SOX9-201ENST00000245479 MYLK4Q86YV6 388 aaPredicted RBP12.02□□□□□ -0.49
SOX9-201ENST00000245479 DCLK2Q8N568 766 aa12.02□□□□□ -0.49
SOX9-201ENST00000245479 C12orf29Q8N999 325 aa12.02□□□□□ -0.49
SOX9-201ENST00000245479 UCMAQ8WVF2 138 aa12.02□□□□□ -0.49
SOX9-201ENST00000245479 ZNF516Q92618 1163 aa12.02□□□□□ -0.49
SOX9-201ENST00000245479 ALKBH8Q96BT7 664 aaKnown RBP12.02□□□□□ -0.49
SOX9-201ENST00000245479 THAP11Q96EK4 314 aa12.02□□□□□ -0.49
SOX9-201ENST00000245479 CCDC97Q96F63 343 aaPredicted RBP12.02□□□□□ -0.49
SOX9-201ENST00000245479 RPF1Q9H9Y2 349 aaKnown RBP12.02□□□□□ -0.49
SOX9-201ENST00000245479 ACSS2Q9NR19 701 aa12.02□□□□□ -0.49
SOX9-201ENST00000245479 SMYD2Q9NRG4 433 aa12.02□□□□□ -0.49
SOX9-201ENST00000245479 HNRNPRO43390 633 aaKnown RBP12.02□□□□□ -0.49
SOX9-201ENST00000245479 LCP1P13796 627 aa12.02□□□□□ -0.49
SOX9-201ENST00000245479 PTPRAP18433 802 aa12.02□□□□□ -0.49
SOX9-201ENST00000245479 MMRN1Q13201 1228 aa12.02□□□□□ -0.49
SOX9-201ENST00000245479 GEN1Q17RS7 908 aa12.02□□□□□ -0.49
SOX9-201ENST00000245479 C11orf63Q6NUN7 778 aa12.02□□□□□ -0.49
SOX9-201ENST00000245479 KLC3Q6P597 504 aa12.02□□□□□ -0.49
SOX9-201ENST00000245479 LRRC6Q86X45 466 aa12.02□□□□□ -0.49
SOX9-201ENST00000245479 GFM2Q969S9 779 aaKnown RBP12.02□□□□□ -0.49
SOX9-201ENST00000245479 UNKQ9C0B0 810 aaKnown RBP12.02□□□□□ -0.49
SOX9-201ENST00000245479 LRMDAQ9H2I8 198 aa12.02□□□□□ -0.49
SOX9-201ENST00000245479 XPNPEP1Q9NQW7 623 aa12.02□□□□□ -0.49
SOX9-201ENST00000245479 CISHQ9NSE2 258 aa12.02□□□□□ -0.49
SOX9-201ENST00000245479 HOXC10Q9NYD6 342 aa12.02□□□□□ -0.49
SOX9-201ENST00000245479 RNF181Q9P0P0 153 aa12.02□□□□□ -0.49
SOX9-201ENST00000245479 ZNF212Q9UDV6 495 aa12.02□□□□□ -0.49
SOX9-201ENST00000245479 FNDC3AQ9Y2H6 1198 aaKnown RBP12.02□□□□□ -0.49
SOX9-201ENST00000245479 PTPRJQ12913 1337 aa12.02□□□□□ -0.49
SOX9-201ENST00000245479 GIPC1O14908 333 aa12.01□□□□□ -0.49
SOX9-201ENST00000245479 AVILO75366 819 aa12.01□□□□□ -0.49
SOX9-201ENST00000245479 APRTP07741 180 aa12.01□□□□□ -0.49
SOX9-201ENST00000245479 EEF1DP3Q658K8 133 aa12.01□□□□□ -0.49
SOX9-201ENST00000245479 VSIG10LQ86VR7 867 aa12.01□□□□□ -0.49
SOX9-201ENST00000245479 TMEM35BQ8NCS4 154 aa12.01□□□□□ -0.49
SOX9-201ENST00000245479 FIZ1Q96SL8 496 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms