RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 NMRK1Q9NWW6 199 aa12.52□□□□□ -0.4
SEC61A1-201ENST00000243253 ZFP69BQ9UJL9 534 aa12.52□□□□□ -0.4
SEC61A1-201ENST00000243253 PTPRFP10586 1907 aa12.52□□□□□ -0.4
SEC61A1-201ENST00000243253 SPDYE5A6NIY4 337 aa12.52□□□□□ -0.4
SEC61A1-201ENST00000243253 VWA5AO00534 786 aa12.52□□□□□ -0.4
SEC61A1-201ENST00000243253 KRT1P04264 644 aa12.52□□□□□ -0.4
SEC61A1-201ENST00000243253 TSHRP16473 764 aa12.52□□□□□ -0.4
SEC61A1-201ENST00000243253 TBXAS1P24557 533 aaPredicted RBP12.52□□□□□ -0.4
SEC61A1-201ENST00000243253 HIF1AQ16665 826 aa12.52□□□□□ -0.4
SEC61A1-201ENST00000243253 PPP1R2P3Q6NXS1 205 aa12.52□□□□□ -0.4
SEC61A1-201ENST00000243253 BBS12Q6ZW61 710 aa12.52□□□□□ -0.4
SEC61A1-201ENST00000243253 LRRC6Q86X45 466 aa12.52□□□□□ -0.4
SEC61A1-201ENST00000243253 UNC45BQ8IWX7 931 aa12.52□□□□□ -0.4
SEC61A1-201ENST00000243253 MICALL2Q8IY33 904 aa12.52□□□□□ -0.4
SEC61A1-201ENST00000243253 DEPTORQ8TB45 409 aa12.52□□□□□ -0.4
SEC61A1-201ENST00000243253 XYLT2Q9H1B5 865 aa12.52□□□□□ -0.4
SEC61A1-201ENST00000243253 VPS37BQ9H9H4 285 aa12.52□□□□□ -0.4
SEC61A1-201ENST00000243253 HNRNPCL1O60812 293 aaKnown RBP12.52□□□□□ -0.41
SEC61A1-201ENST00000243253 GRAP2O75791 330 aa12.52□□□□□ -0.41
SEC61A1-201ENST00000243253 ASPAP45381 313 aa12.52□□□□□ -0.41
SEC61A1-201ENST00000243253 NUMBP49757 651 aa12.52□□□□□ -0.41
SEC61A1-201ENST00000243253 HIRAP54198 1017 aaPredicted RBP12.52□□□□□ -0.41
SEC61A1-201ENST00000243253 NRLP54845 237 aa12.52□□□□□ -0.41
SEC61A1-201ENST00000243253 CDO1Q16878 200 aa12.52□□□□□ -0.41
SEC61A1-201ENST00000243253 CDHR3Q6ZTQ4 885 aa12.52□□□□□ -0.41
SEC61A1-201ENST00000243253 FBXO36Q8NEA4 188 aa12.52□□□□□ -0.41
SEC61A1-201ENST00000243253 TAS2R1Q9NYW7 299 aa12.52□□□□□ -0.41
SEC61A1-201ENST00000243253 RBAKQ9NYW8 714 aaPredicted RBP12.52□□□□□ -0.41
SEC61A1-201ENST00000243253 LUC7L3O95232 432 aaKnown RBP12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 NR3C2P08235 984 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 RARBP10826 455 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 KRT15P19012 456 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 EIF4BP23588 611 aaKnown RBP12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 OVGP1Q12889 678 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 GRM1Q13255 1194 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 PIGHQ14442 188 aaPredicted RBP12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 KCNJ11Q14654 390 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 CIAPIN1Q6FI81 312 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 KBTBD2Q8IY47 623 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 NETO2Q8NC67 525 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 ACTL9Q8TC94 416 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 FAM167BQ9BTA0 163 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 MANSC1Q9H8J5 431 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 PNPLA8Q9NP80 782 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 FBXO6Q9NRD1 293 aaPredicted RBP12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 STRIP2Q9ULQ0 834 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 SPATA31C2B4DYI2 1134 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 TBX10O75333 385 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 NPTXRO95502 500 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 RFC1P35251 1148 aaPredicted RBP12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 TNFSF9P41273 254 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 MRPS5P82675 430 aaKnown RBP12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 OTUD4Q01804 1114 aaKnown RBP12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 OCRLQ01968 901 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 TARBP2Q15633 366 aaKnown RBP12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 SMYD5Q6GMV2 418 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 C3orf62Q6ZUJ4 267 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 FBXO27Q8NI29 283 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 OSBPL1AQ9BXW6 950 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 KRT82Q9NSB4 513 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 DDX56Q9NY93 547 aaKnown RBP12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 BRCA1P38398 1863 aaKnown RBP12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 INO80B-WBP1J3KQ70 363 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 GSRP00390 522 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 ACTR2P61160 394 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 EMC2Q15006 297 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 TEX44Q53QW1 395 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 PCGF5Q86SE9 256 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 TTC7BQ86TV6 843 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 CMASQ8NFW8 434 aaPredicted RBP12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 JOSD2Q8TAC2 188 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 CXorf38Q8TB03 319 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 FNIP1Q8TF40 1166 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 SLC44A1Q8WWI5 657 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 GATA6Q92908 595 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 INO80BQ9C086 356 aaPredicted RBP12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 ZNF518BQ9C0D4 1074 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 SLC24A3Q9HC58 644 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 MYOZ2Q9NPC6 264 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 TBC1D30Q9Y2I9 924 aa12.51□□□□□ -0.41
SEC61A1-201ENST00000243253 ZNF638Q14966 1978 aaKnown RBP12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 HMX2A2RU54 273 aa12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 PGK2P07205 417 aa12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 FESP07332 822 aa12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 KDELR1P24390 212 aa12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 NAMPTP43490 491 aa12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 RAP1GDS1P52306 607 aa12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 CDK16Q00536 496 aa12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 NCOA4Q13772 614 aa12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 PTPN20Q4JDL3 420 aa12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 GJC2Q5T442 439 aaPredicted RBP12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 ANGEL2Q5VTE6 544 aaKnown RBP12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 GADL1Q6ZQY3 521 aa12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 PCYT2Q99447 389 aa12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 MMADHCQ9H3L0 296 aaPredicted RBP12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 DDX43Q9NXZ2 648 aaKnown RBP12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 FBXO40Q9UH90 709 aa12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 ZNF214Q9UL59 606 aaPredicted RBP12.5□□□□□ -0.41
SEC61A1-201ENST00000243253 SYNJ2BP-COX16A0A087WUM0 186 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms