RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 OSBPP22059 807 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 CCDC60Q8IWA6 550 aaPredicted RBP13.35□□□□□ -0.27
VAMP4-201ENST00000236192 BBS5Q8N3I7 341 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 LCORLQ8N3X6 602 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 TOR1AIP2Q8NFQ8 470 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 PDCD6IPQ8WUM4 868 aaKnown RBP13.35□□□□□ -0.27
VAMP4-201ENST00000236192 GATA6Q92908 595 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 VTA1Q9NP79 307 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 ABCC3O15438 1527 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 POTEMA6NI47 508 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 CLDN25C9JDP6 229 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 UGT1A9O60656 530 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 UGT1A6P19224 532 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 UGT1A1P22309 533 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 UGT1A4P22310 534 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 UGT1A3P35503 534 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 UGT1A5P35504 534 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 SOX6P35712 828 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 GABPAQ06546 454 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 WDR45BQ5MNZ6 344 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 ARMC4Q5T2S8 1044 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 PRUNE1Q86TP1 453 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 TTC30BQ8N4P2 665 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 IP6K1Q92551 441 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 ANO3Q9BYT9 981 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 IRF2BPLQ9H1B7 796 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 SEMA6AQ9H2E6 1030 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 TMEM206Q9H813 350 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 UGT1A7Q9HAW7 530 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 UGT1A10Q9HAW8 530 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 UGT1A8Q9HAW9 530 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 THAP1Q9NVV9 213 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 STOML2Q9UJZ1 356 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 UNC13BO14795 1591 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 PNMA8CA0A1B0GUJ8 204 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 A0A1W2PQ72 361 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 GABBR2O75899 941 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 PDGFRBP09619 1106 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 FCGR1AP12314 374 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 MIIPQ5JXC2 388 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 PCYOX1LQ8NBM8 494 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 ATG4AQ8WYN0 398 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 ERLEC1Q96DZ1 483 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 PPP1R36Q96LQ0 422 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 BIRC8Q96P09 236 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 MTG1Q9BT17 334 aaPredicted RBP13.35□□□□□ -0.27
VAMP4-201ENST00000236192 TEX13BQ9BXU2 312 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 PSTPIP2Q9H939 334 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 CYP26B1Q9NR63 512 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 ABCB10Q9NRK6 738 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 PCDHB4Q9Y5E5 795 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 KRT20P35900 424 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 ENTPD1P49961 510 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 C6orf52Q5T4I8 152 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 PSMA8Q8TAA3 256 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 STARD8Q92502 1023 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 PHF8Q9UPP1 1060 aa13.35□□□□□ -0.27
VAMP4-201ENST00000236192 OR6B1O95007 311 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 TMEM191BP0C7N4 346 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 ABRAXAS1Q6UWZ7 409 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 TRABD2AQ86V40 505 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 OR8H2Q8N162 312 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 QKIQ96PU8 341 aaKnown RBP eCLIP13.34□□□□□ -0.27
VAMP4-201ENST00000236192 CALN1Q9BXU9 219 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 FUOMA2VDF0 154 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 CD19P15391 556 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 CD58P19256 250 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 PON1P27169 355 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 LRPAP1P30533 357 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 NEK10Q6ZWH5 1172 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 CYP4V2Q6ZWL3 525 aaPredicted RBP13.34□□□□□ -0.27
VAMP4-201ENST00000236192 ALYREFQ86V81 257 aaKnown RBP13.34□□□□□ -0.27
VAMP4-201ENST00000236192 C10orf82Q8WW14 230 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 USP13Q92995 863 aaPredicted RBP13.34□□□□□ -0.27
VAMP4-201ENST00000236192 HES6Q96HZ4 224 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 CLPTM1LQ96KA5 538 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 CDRT15Q96T59 188 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 ASPSCR1Q9BZE9 553 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 SEC31BQ9NQW1 1179 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 SYNPO2Q9UMS6 1093 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 DISP1Q96F81 1524 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 SNX2O60749 519 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 HLA-DOAP06340 250 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 IL12AP29459 219 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 POLD3Q15054 466 aaPredicted RBP13.34□□□□□ -0.27
VAMP4-201ENST00000236192 BROXQ5VW32 411 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 TAF2Q6P1X5 1199 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 RAB44Q7Z6P3 723 aaPredicted RBP13.34□□□□□ -0.27
VAMP4-201ENST00000236192 CCDC28AQ8IWP9 274 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 C17orf80Q9BSJ5 609 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 BBS2Q9BXC9 721 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 SENP2Q9HC62 589 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 CCDC59Q9P031 241 aaKnown RBP13.34□□□□□ -0.27
VAMP4-201ENST00000236192 PCDHA6Q9UN73 950 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 PCDHA8Q9Y5H6 950 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 TMEM221A6NGB7 291 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 TGDSO95455 350 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 NAMPTP43490 491 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 INHBEP58166 350 aa13.34□□□□□ -0.27
VAMP4-201ENST00000236192 TNFAIP2Q03169 654 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms