RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 C7orf31Q8N865 590 aa21.56■■□□□ 1.04
SNX3-201ENST00000230085 SH2D3AQ9BRG2 576 aa21.56■■□□□ 1.04
SNX3-201ENST00000230085 TBC1D10AQ9BXI6 508 aa21.56■■□□□ 1.04
SNX3-201ENST00000230085 TRABDQ9H4I3 376 aa21.56■■□□□ 1.04
SNX3-201ENST00000230085 KIAA1586Q9HCI6 787 aa21.56■■□□□ 1.04
SNX3-201ENST00000230085 MLXIPLQ9NP71 852 aa21.56■■□□□ 1.04
SNX3-201ENST00000230085 CHORDC1Q9UHD1 332 aaPredicted RBP21.56■■□□□ 1.04
SNX3-201ENST00000230085 R3HDM2Q9Y2K5 976 aaKnown RBP21.56■■□□□ 1.04
SNX3-201ENST00000230085 PCDHB2Q9Y5E7 798 aa21.56■■□□□ 1.04
SNX3-201ENST00000230085 EXOC1LA0A1B0GW35 172 aa21.56■■□□□ 1.04
SNX3-201ENST00000230085 ARVCFO00192 962 aa21.56■■□□□ 1.04
SNX3-201ENST00000230085 ZWINTO95229 277 aa21.56■■□□□ 1.04
SNX3-201ENST00000230085 IL1BP01584 269 aa21.56■■□□□ 1.04
SNX3-201ENST00000230085 SMIM10L2AP0DMW4 78 aa21.56■■□□□ 1.04
SNX3-201ENST00000230085 SMIM10L2BP0DMW5 78 aa21.56■■□□□ 1.04
SNX3-201ENST00000230085 SF3A3Q12874 501 aaKnown RBP eCLIP21.56■■□□□ 1.04
SNX3-201ENST00000230085 HIC1Q14526 733 aa21.56■■□□□ 1.04
SNX3-201ENST00000230085 FAM91A1Q658Y4 838 aa21.56■■□□□ 1.04
SNX3-201ENST00000230085 MON1BQ7L1V2 547 aa21.56■■□□□ 1.04
SNX3-201ENST00000230085 C4orf19Q8IY42 314 aa21.56■■□□□ 1.04
SNX3-201ENST00000230085 SLC43A3Q8NBI5 491 aa21.56■■□□□ 1.04
SNX3-201ENST00000230085 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.56■■□□□ 1.04
SNX3-201ENST00000230085 MICAL1Q8TDZ2 1067 aa21.56■■□□□ 1.04
SNX3-201ENST00000230085 KCNN1Q92952 543 aa21.56■■□□□ 1.04
SNX3-201ENST00000230085 OSBPL8Q9BZF1 889 aa21.56■■□□□ 1.04
SNX3-201ENST00000230085 SETD4Q9NVD3 440 aa21.56■■□□□ 1.04
SNX3-201ENST00000230085 NKX1-2Q9UD57 310 aaPredicted RBP21.56■■□□□ 1.04
SNX3-201ENST00000230085 SHOC2Q9UQ13 582 aa21.56■■□□□ 1.04
SNX3-201ENST00000230085 TRIP12Q14669 1992 aaPredicted RBP21.55■■□□□ 1.04
SNX3-201ENST00000230085 ALOX15BO15296 676 aa21.55■■□□□ 1.04
SNX3-201ENST00000230085 OATP04181 439 aa21.55■■□□□ 1.04
SNX3-201ENST00000230085 LINGO3P0C6S8 592 aa21.55■■□□□ 1.04
SNX3-201ENST00000230085 INSRRP14616 1297 aa21.55■■□□□ 1.04
SNX3-201ENST00000230085 CDK7P50613 346 aa21.55■■□□□ 1.04
SNX3-201ENST00000230085 CLDN10P78369 228 aa21.55■■□□□ 1.04
SNX3-201ENST00000230085 MCL1Q07820 350 aa21.55■■□□□ 1.04
SNX3-201ENST00000230085 LRRC38Q5VT99 294 aa21.55■■□□□ 1.04
SNX3-201ENST00000230085 ANO7Q6IWH7 933 aa21.55■■□□□ 1.04
SNX3-201ENST00000230085 ANO5Q75V66 913 aa21.55■■□□□ 1.04
SNX3-201ENST00000230085 SMC6Q96SB8 1091 aa21.55■■□□□ 1.04
SNX3-201ENST00000230085 SH3GL3Q99963 347 aa21.55■■□□□ 1.04
SNX3-201ENST00000230085 HBP1O60381 514 aa21.54■■□□□ 1.04
SNX3-201ENST00000230085 RALAP11233 206 aa21.54■■□□□ 1.04
SNX3-201ENST00000230085 YWHABP31946 246 aaKnown RBP21.54■■□□□ 1.04
SNX3-201ENST00000230085 ZNF200P98182 395 aaPredicted RBP21.54■■□□□ 1.04
SNX3-201ENST00000230085 TMED2Q15363 201 aa21.54■■□□□ 1.04
SNX3-201ENST00000230085 LRRC26Q2I0M4 334 aa21.54■■□□□ 1.04
SNX3-201ENST00000230085 TSNAXIP1Q2TAA8 658 aa21.54■■□□□ 1.04
SNX3-201ENST00000230085 XKR3Q5GH77 459 aa21.54■■□□□ 1.04
SNX3-201ENST00000230085 EFHC2Q5JST6 749 aa21.54■■□□□ 1.04
SNX3-201ENST00000230085 LRRC8CQ8TDW0 803 aa21.54■■□□□ 1.04
SNX3-201ENST00000230085 NTPCRQ9BSD7 190 aaKnown RBP21.54■■□□□ 1.04
SNX3-201ENST00000230085 C17orf75Q9HAS0 396 aa21.54■■□□□ 1.04
SNX3-201ENST00000230085 MRPL47Q9HD33 250 aaKnown RBP21.54■■□□□ 1.04
SNX3-201ENST00000230085 GTF2IRD1Q9UHL9 959 aa21.54■■□□□ 1.04
SNX3-201ENST00000230085 TISP43B9A030 160 aa21.53■■□□□ 1.04
SNX3-201ENST00000230085 DKC1O60832 514 aaKnown RBP eCLIP21.53■■□□□ 1.04
SNX3-201ENST00000230085 TSHRP16473 764 aa21.53■■□□□ 1.04
SNX3-201ENST00000230085 GM2AP17900 193 aa21.53■■□□□ 1.04
SNX3-201ENST00000230085 CETN2P41208 172 aa21.53■■□□□ 1.04
SNX3-201ENST00000230085 IGBP1P78318 339 aa21.53■■□□□ 1.04
SNX3-201ENST00000230085 OCRLQ01968 901 aa21.53■■□□□ 1.04
SNX3-201ENST00000230085 CTC1Q2NKJ3 1217 aa21.53■■□□□ 1.04
SNX3-201ENST00000230085 PLEKHA7Q6IQ23 1121 aa21.53■■□□□ 1.04
SNX3-201ENST00000230085 GDF6Q6KF10 455 aaPredicted RBP21.53■■□□□ 1.04
SNX3-201ENST00000230085 PHF13Q86YI8 300 aaPredicted RBP21.53■■□□□ 1.04
SNX3-201ENST00000230085 TRAPPC12Q8WVT3 735 aa21.53■■□□□ 1.04
SNX3-201ENST00000230085 SPIRE2Q8WWL2 714 aa21.53■■□□□ 1.04
SNX3-201ENST00000230085 ALKBH8Q96BT7 664 aaKnown RBP21.53■■□□□ 1.04
SNX3-201ENST00000230085 NUDCD1Q96RS6 583 aa21.53■■□□□ 1.04
SNX3-201ENST00000230085 DHRS4Q9BTZ2 278 aa21.53■■□□□ 1.04
SNX3-201ENST00000230085 OSBPL1AQ9BXW6 950 aa21.53■■□□□ 1.04
SNX3-201ENST00000230085 MMADHCQ9H3L0 296 aaPredicted RBP21.53■■□□□ 1.04
SNX3-201ENST00000230085 NRBP2Q9NSY0 501 aa21.53■■□□□ 1.04
SNX3-201ENST00000230085 ANKEF1Q9NU02 776 aa21.53■■□□□ 1.04
SNX3-201ENST00000230085 SEPT9Q9UHD8 586 aaPredicted RBP21.53■■□□□ 1.04
SNX3-201ENST00000230085 ZBTB42B2RXF5 422 aa21.53■■□□□ 1.04
SNX3-201ENST00000230085 DNAJC6O75061 913 aa21.53■■□□□ 1.04
SNX3-201ENST00000230085 CBLBQ13191 982 aa21.53■■□□□ 1.04
SNX3-201ENST00000230085 DNAJC3Q13217 504 aa21.53■■□□□ 1.04
SNX3-201ENST00000230085 SNX17Q15036 470 aa21.53■■□□□ 1.04
SNX3-201ENST00000230085 PLA2G4FQ68DD2 849 aa21.53■■□□□ 1.04
SNX3-201ENST00000230085 NAIF1Q69YI7 327 aaPredicted RBP21.53■■□□□ 1.04
SNX3-201ENST00000230085 SESTD1Q86VW0 696 aa21.53■■□□□ 1.04
SNX3-201ENST00000230085 CBWD2Q8IUF1 395 aa21.53■■□□□ 1.04
SNX3-201ENST00000230085 RBBP8NLQ8NC74 664 aaPredicted RBP21.53■■□□□ 1.04
SNX3-201ENST00000230085 ZBTB10Q96DT7 871 aa21.53■■□□□ 1.04
SNX3-201ENST00000230085 FAM167AQ96KS9 214 aa21.53■■□□□ 1.04
SNX3-201ENST00000230085 C9orf72Q96LT7 481 aa21.53■■□□□ 1.04
SNX3-201ENST00000230085 ACP6Q9NPH0 428 aa21.53■■□□□ 1.04
SNX3-201ENST00000230085 TRMT13Q9NUP7 481 aaKnown RBP21.53■■□□□ 1.04
SNX3-201ENST00000230085 TBK1Q9UHD2 729 aa21.53■■□□□ 1.04
SNX3-201ENST00000230085 SCINQ9Y6U3 715 aa21.53■■□□□ 1.04
SNX3-201ENST00000230085 NRCAMQ92823 1304 aa21.52■■□□□ 1.04
SNX3-201ENST00000230085 LIASO43766 372 aa21.52■■□□□ 1.04
SNX3-201ENST00000230085 ABCD1P33897 745 aa21.52■■□□□ 1.04
SNX3-201ENST00000230085 RAD23BP54727 409 aa21.52■■□□□ 1.04
SNX3-201ENST00000230085 GRIK4Q16099 956 aa21.52■■□□□ 1.04
SNX3-201ENST00000230085 TRIM60Q495X7 471 aa21.52■■□□□ 1.04
SNX3-201ENST00000230085 LIN9Q5TKA1 542 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms