RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 CYP2C18P33260 490 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 PURAQ00577 322 aaKnown RBP9.83□□□□□ -0.84
CCDC113-201ENST00000219299 PIGHQ14442 188 aaPredicted RBP9.83□□□□□ -0.84
CCDC113-201ENST00000219299 TMCO4Q5TGY1 634 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 NUGGCQ68CJ6 796 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 EMC1Q8N766 993 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 TTC13Q8NBP0 860 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 CXorf38Q8TB03 319 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 MORC4Q8TE76 937 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 PDCD6IPQ8WUM4 868 aaKnown RBP9.83□□□□□ -0.84
CCDC113-201ENST00000219299 C18orf25Q96B23 403 aaPredicted RBP9.83□□□□□ -0.84
CCDC113-201ENST00000219299 PAWRQ96IZ0 340 aaKnown RBP9.83□□□□□ -0.84
CCDC113-201ENST00000219299 RNPC3Q96LT9 517 aaKnown RBP9.83□□□□□ -0.84
CCDC113-201ENST00000219299 PSD3Q9NYI0 1048 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 ANAPC5Q9UJX4 755 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 SLC8A2Q9UPR5 921 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 Q9Y3F1 56 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 C2CD2Q9Y426 696 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 TSPAN1O60635 241 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 F2P00734 622 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 CALCAP01258 141 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 CKMP06732 381 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 ESRRAP11474 423 aaPredicted RBP9.83□□□□□ -0.84
CCDC113-201ENST00000219299 IRF2BP1Q8IU81 584 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 LRGUKQ96M69 825 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 LACRTQ9GZZ8 138 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 GTF2IRD1Q9UHL9 959 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 HPCAL4Q9UM19 191 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 F5H423 210 aaPredicted RBP9.83□□□□□ -0.84
CCDC113-201ENST00000219299 H3BRJ5 948 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 MX2P20592 715 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 RECQLP46063 649 aaPredicted RBP9.83□□□□□ -0.84
CCDC113-201ENST00000219299 TPI1P60174 286 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 RPL10AP62906 217 aaKnown RBP9.83□□□□□ -0.84
CCDC113-201ENST00000219299 SATB1Q01826 763 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 TMED2Q15363 201 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 BBS9Q3SYG4 887 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 C1orf54Q8WWF1 131 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 BTBD6Q96KE9 485 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 CHST12Q9NRB3 414 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 ZMYND8Q9ULU4 1186 aaPredicted RBP9.83□□□□□ -0.84
CCDC113-201ENST00000219299 SHANK3Q9BYB0 1731 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 SMIM28A0A1B0GU29 152 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 M0QYT0 321 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 TTC4O95801 387 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 GPD1P21695 349 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 EDNRBP24530 442 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 GARSP41250 739 aaKnown RBP9.83□□□□□ -0.84
CCDC113-201ENST00000219299 SLC1A1P43005 524 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 TSHZ1Q6ZSZ6 1077 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 SDCCAG3Q96C92 435 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 NTPCRQ9BSD7 190 aaKnown RBP9.83□□□□□ -0.84
CCDC113-201ENST00000219299 EFHD1Q9BUP0 239 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 LSM7Q9UK45 103 aaKnown RBP9.83□□□□□ -0.84
CCDC113-201ENST00000219299 SNX24Q9Y343 169 aa9.83□□□□□ -0.84
CCDC113-201ENST00000219299 TCHHQ07283 1943 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 CTIFO43310 598 aaKnown RBP9.82□□□□□ -0.84
CCDC113-201ENST00000219299 LGR5O75473 907 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 GZMAP12544 262 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 SAT1P21673 171 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 KLRC2P26717 231 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 SLCO1A2P46721 670 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 TM4SF4P48230 202 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 ASPHQ12797 758 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 MAPK7Q13164 816 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 GDF6Q6KF10 455 aaPredicted RBP9.82□□□□□ -0.84
CCDC113-201ENST00000219299 MAMDC4Q6UXC1 1216 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 PDZD8Q8NEN9 1154 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 ZNF558Q96NG5 402 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 PDZD7Q9H5P4 517 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 VIPAS39Q9H9C1 493 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 GIT1Q9Y2X7 761 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 TELO2Q9Y4R8 837 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 ARVCFO00192 962 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 EPHB6O15197 1021 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 NFKBIAP25963 317 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 MBTD1Q05BQ5 628 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 ACCSLQ4AC99 568 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 MIIPQ5JXC2 388 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 COG1Q8WTW3 980 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 ST6GALNAC4Q9H4F1 302 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 TARSL2A2RTX5 802 aaKnown RBP9.82□□□□□ -0.84
CCDC113-201ENST00000219299 RASSF10A6NK89 507 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 F8W8V4 182 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 MEFVO15553 781 aaPredicted RBP9.82□□□□□ -0.84
CCDC113-201ENST00000219299 BDNFP23560 247 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 BRCC3P46736 316 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 TKTL1P51854 596 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 ZNF449Q6P9G9 518 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 C7orf61Q8IZ16 206 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 CDKL2Q92772 493 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 ACSF2Q96CM8 615 aaPredicted RBP9.82□□□□□ -0.84
CCDC113-201ENST00000219299 DDX56Q9NY93 547 aaKnown RBP9.82□□□□□ -0.84
CCDC113-201ENST00000219299 PCDHB5Q9Y5E4 795 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 PRRC2BQ5JSZ5 2229 aaKnown RBP9.82□□□□□ -0.84
CCDC113-201ENST00000219299 PPP2R2AP63151 447 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 MCL1Q07820 350 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 AP1B1Q10567 949 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 SLC39A12Q504Y0 691 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 ZNF618Q5T7W0 954 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms