RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 TRIM6Q9C030 488 aaPredicted RBP18.08■□□□□ 0.48
USB1-201ENST00000219281 PHACTR1Q9C0D0 580 aa18.08■□□□□ 0.48
USB1-201ENST00000219281 DENND2DQ9H6A0 471 aaPredicted RBP18.08■□□□□ 0.48
USB1-201ENST00000219281 BTBD7Q9P203 1132 aa18.08■□□□□ 0.48
USB1-201ENST00000219281 CHMP2BQ9UQN3 213 aa18.08■□□□□ 0.48
USB1-201ENST00000219281 ADM5C9JUS6 153 aa18.07■□□□□ 0.48
USB1-201ENST00000219281 ENTPD5O75356 428 aa18.07■□□□□ 0.48
USB1-201ENST00000219281 NEBLO76041 1014 aa18.07■□□□□ 0.48
USB1-201ENST00000219281 STXBP2Q15833 593 aa18.07■□□□□ 0.48
USB1-201ENST00000219281 WASHC2DQ5SRD0 308 aa18.07■□□□□ 0.48
USB1-201ENST00000219281 ZPBP2Q6X784 338 aa18.07■□□□□ 0.48
USB1-201ENST00000219281 THNSL1Q8IYQ7 743 aa18.07■□□□□ 0.48
USB1-201ENST00000219281 KCTD6Q8NC69 237 aa18.07■□□□□ 0.48
USB1-201ENST00000219281 ZNF398Q8TD17 642 aa18.07■□□□□ 0.48
USB1-201ENST00000219281 PRPF31Q8WWY3 499 aaKnown RBP18.07■□□□□ 0.48
USB1-201ENST00000219281 VPS11Q9H270 941 aa18.07■□□□□ 0.48
USB1-201ENST00000219281 SAR1AQ9NR31 198 aa18.07■□□□□ 0.48
USB1-201ENST00000219281 LNPEPQ9UIQ6 1025 aa18.07■□□□□ 0.48
USB1-201ENST00000219281 MT-ND3P03897 115 aa18.07■□□□□ 0.48
USB1-201ENST00000219281 RFC5P40937 340 aa18.07■□□□□ 0.48
USB1-201ENST00000219281 ABL2P42684 1182 aa18.07■□□□□ 0.48
USB1-201ENST00000219281 ASPAP45381 313 aa18.07■□□□□ 0.48
USB1-201ENST00000219281 EIF3EP60228 445 aaKnown RBP18.07■□□□□ 0.48
USB1-201ENST00000219281 PSMC1P62191 440 aaKnown RBP18.07■□□□□ 0.48
USB1-201ENST00000219281 TAF5Q15542 800 aa18.07■□□□□ 0.48
USB1-201ENST00000219281 TRIM68Q6AZZ1 485 aa18.07■□□□□ 0.48
USB1-201ENST00000219281 IGDCC3Q8IVU1 814 aa18.07■□□□□ 0.48
USB1-201ENST00000219281 PCYT2Q99447 389 aa18.07■□□□□ 0.48
USB1-201ENST00000219281 FRMD8P1Q9BZ68 369 aaPredicted RBP18.07■□□□□ 0.48
USB1-201ENST00000219281 HEY2Q9UBP5 337 aa18.07■□□□□ 0.48
USB1-201ENST00000219281 NXF1Q9UBU9 619 aaKnown RBP18.07■□□□□ 0.48
USB1-201ENST00000219281 POLIQ9UNA4 740 aa18.07■□□□□ 0.48
USB1-201ENST00000219281 MYH9P35579 1960 aaKnown RBP18.07■□□□□ 0.48
USB1-201ENST00000219281 EIF4E1BA6NMX2 242 aaKnown RBP18.06■□□□□ 0.48
USB1-201ENST00000219281 E7ENQ6 273 aa18.06■□□□□ 0.48
USB1-201ENST00000219281 MSCO60682 206 aa18.06■□□□□ 0.48
USB1-201ENST00000219281 LPXNO60711 386 aa18.06■□□□□ 0.48
USB1-201ENST00000219281 TOM1L1O75674 476 aa18.06■□□□□ 0.48
USB1-201ENST00000219281 POLR2BP30876 1174 aaKnown RBP18.06■□□□□ 0.48
USB1-201ENST00000219281 RAP1GAPP47736 663 aa18.06■□□□□ 0.48
USB1-201ENST00000219281 YWHAEP62258 255 aaKnown RBP18.06■□□□□ 0.48
USB1-201ENST00000219281 GRM1Q13255 1194 aa18.06■□□□□ 0.48
USB1-201ENST00000219281 FAM182AQ5T1J6 154 aa18.06■□□□□ 0.48
USB1-201ENST00000219281 MICAL1Q8TDZ2 1067 aa18.06■□□□□ 0.48
USB1-201ENST00000219281 HSPH1Q92598 858 aa18.06■□□□□ 0.48
USB1-201ENST00000219281 ALKBH8Q96BT7 664 aaKnown RBP18.06■□□□□ 0.48
USB1-201ENST00000219281 MIPEPQ99797 713 aa18.06■□□□□ 0.48
USB1-201ENST00000219281 MRPL4Q9BYD3 311 aaKnown RBP18.06■□□□□ 0.48
USB1-201ENST00000219281 R3HDMLQ9H3Y0 253 aa18.06■□□□□ 0.48
USB1-201ENST00000219281 TLE6Q9H808 572 aa18.06■□□□□ 0.48
USB1-201ENST00000219281 METTL5Q9NRN9 209 aaKnown RBP18.06■□□□□ 0.48
USB1-201ENST00000219281 LRRC42Q9Y546 428 aa18.06■□□□□ 0.48
USB1-201ENST00000219281 CFAP69A5D8W1 941 aa18.06■□□□□ 0.48
USB1-201ENST00000219281 SMNDC1O75940 238 aaKnown RBP eCLIP18.06■□□□□ 0.482e-6■■■■□ 22.6
USB1-201ENST00000219281 SRGAP2CP0DJJ0 459 aa18.06■□□□□ 0.48
USB1-201ENST00000219281 MARK3P27448 753 aa18.06■□□□□ 0.48
USB1-201ENST00000219281 ELK3P41970 407 aa18.06■□□□□ 0.48
USB1-201ENST00000219281 ORC1Q13415 861 aa18.06■□□□□ 0.48
USB1-201ENST00000219281 DPYSL3Q14195 570 aa18.06■□□□□ 0.48
USB1-201ENST00000219281 TAZQ16635 292 aa18.06■□□□□ 0.48
USB1-201ENST00000219281 SYCP2LQ5T4T6 812 aa18.06■□□□□ 0.48
USB1-201ENST00000219281 ENDOVQ8N8Q3 282 aaKnown RBP18.06■□□□□ 0.48
USB1-201ENST00000219281 CHST13Q8NET6 341 aa18.06■□□□□ 0.48
USB1-201ENST00000219281 SERAC1Q96JX3 654 aa18.06■□□□□ 0.48
USB1-201ENST00000219281 ANKRD27Q96NW4 1050 aa18.06■□□□□ 0.48
USB1-201ENST00000219281 TSSK1BQ9BXA7 367 aa18.06■□□□□ 0.48
USB1-201ENST00000219281 TRIM55Q9BYV6 548 aa18.06■□□□□ 0.48
USB1-201ENST00000219281 ADARB2Q9NS39 739 aaKnown RBP18.06■□□□□ 0.48
USB1-201ENST00000219281 NRBP2Q9NSY0 501 aa18.06■□□□□ 0.48
USB1-201ENST00000219281 LCTP09848 1927 aa18.06■□□□□ 0.48
USB1-201ENST00000219281 DICER1Q9UPY3 1922 aaKnown RBP18.06■□□□□ 0.48
USB1-201ENST00000219281 SIP14410 1827 aa18.05■□□□□ 0.48
USB1-201ENST00000219281 OGTO15294 1046 aa18.05■□□□□ 0.48
USB1-201ENST00000219281 PTK7Q13308 1070 aa18.05■□□□□ 0.48
USB1-201ENST00000219281 BLMHQ13867 455 aa18.05■□□□□ 0.48
USB1-201ENST00000219281 TARBP2Q15633 366 aaKnown RBP18.05■□□□□ 0.48
USB1-201ENST00000219281 RFWD3Q6PCD5 774 aa18.05■□□□□ 0.48
USB1-201ENST00000219281 SPDL1Q96EA4 605 aa18.05■□□□□ 0.48
USB1-201ENST00000219281 CPXM1Q96SM3 734 aa18.05■□□□□ 0.48
USB1-201ENST00000219281 CYTH2Q99418 400 aa18.05■□□□□ 0.48
USB1-201ENST00000219281 ACO2Q99798 780 aaKnown RBP18.05■□□□□ 0.48
USB1-201ENST00000219281 XYLT2Q9H1B5 865 aa18.05■□□□□ 0.48
USB1-201ENST00000219281 SYNCQ9H7C4 482 aa18.05■□□□□ 0.48
USB1-201ENST00000219281 ARL8BQ9NVJ2 186 aa18.05■□□□□ 0.48
USB1-201ENST00000219281 IGKV6D-21A0A0A0MT36 114 aa18.05■□□□□ 0.48
USB1-201ENST00000219281 IRF6O14896 467 aa18.05■□□□□ 0.48
USB1-201ENST00000219281 HAUS5O94927 633 aa18.05■□□□□ 0.48
USB1-201ENST00000219281 LUC7L3O95232 432 aaKnown RBP18.05■□□□□ 0.48
USB1-201ENST00000219281 RBP3P10745 1247 aa18.05■□□□□ 0.48
USB1-201ENST00000219281 ICAM3P32942 547 aa18.05■□□□□ 0.48
USB1-201ENST00000219281 ARFIP2P53365 341 aa18.05■□□□□ 0.48
USB1-201ENST00000219281 OSTNP61366 133 aa18.05■□□□□ 0.48
USB1-201ENST00000219281 DNERQ8NFT8 737 aa18.05■□□□□ 0.48
USB1-201ENST00000219281 TTC17Q96AE7 1141 aa18.05■□□□□ 0.48
USB1-201ENST00000219281 FAM111AQ96PZ2 611 aa18.05■□□□□ 0.48
USB1-201ENST00000219281 CALN1Q9BXU9 219 aa18.05■□□□□ 0.48
USB1-201ENST00000219281 CADM1Q9BY67 442 aaKnown RBP18.05■□□□□ 0.48
USB1-201ENST00000219281 MAF1Q9H063 256 aa18.05■□□□□ 0.48
USB1-201ENST00000219281 CPSF3Q9UKF6 684 aaKnown RBP18.05■□□□□ 0.48
USB1-201ENST00000219281 SBF1O95248 1867 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms