RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 PCYOX1Q9UHG3 505 aa10.48□□□□□ -0.73
USP11-201ENST00000218348 GRIN2DO15399 1336 aa10.48□□□□□ -0.73
USP11-201ENST00000218348 SGK1O00141 431 aa10.47□□□□□ -0.73
USP11-201ENST00000218348 PODXLO00592 558 aa10.47□□□□□ -0.73
USP11-201ENST00000218348 EIF3HO15372 352 aaKnown RBP eCLIP10.47□□□□□ -0.73
USP11-201ENST00000218348 RGS16O15492 202 aaPredicted RBP10.47□□□□□ -0.73
USP11-201ENST00000218348 MICAL2O94851 1124 aa10.47□□□□□ -0.73
USP11-201ENST00000218348 MMP3P08254 477 aa10.47□□□□□ -0.73
USP11-201ENST00000218348 HSPA1AP0DMV8 641 aaKnown RBP10.47□□□□□ -0.73
USP11-201ENST00000218348 HSPA1BP0DMV9 641 aaKnown RBP10.47□□□□□ -0.73
USP11-201ENST00000218348 IGFBP6P24592 240 aaPredicted RBP10.47□□□□□ -0.73
USP11-201ENST00000218348 IL1R2P27930 398 aa10.47□□□□□ -0.73
USP11-201ENST00000218348 MAGEA8P43361 318 aa10.47□□□□□ -0.73
USP11-201ENST00000218348 MNX1P50219 401 aaPredicted RBP10.47□□□□□ -0.73
USP11-201ENST00000218348 YARSP54577 528 aaKnown RBP10.47□□□□□ -0.73
USP11-201ENST00000218348 PTPN11Q06124 597 aaPredicted RBP10.47□□□□□ -0.73
USP11-201ENST00000218348 MMRN1Q13201 1228 aa10.47□□□□□ -0.73
USP11-201ENST00000218348 MARCH8Q5T0T0 291 aa10.47□□□□□ -0.73
USP11-201ENST00000218348 RUFY4Q6ZNE9 571 aa10.47□□□□□ -0.73
USP11-201ENST00000218348 SLC4A11Q8NBS3 891 aa10.47□□□□□ -0.73
USP11-201ENST00000218348 PPTC7Q8NI37 304 aa10.47□□□□□ -0.73
USP11-201ENST00000218348 B3GNT5Q9BYG0 378 aa10.47□□□□□ -0.73
USP11-201ENST00000218348 RNF39Q9H2S5 420 aa10.47□□□□□ -0.73
USP11-201ENST00000218348 CDC42EP4Q9H3Q1 356 aaKnown RBP10.47□□□□□ -0.73
USP11-201ENST00000218348 SCINQ9Y6U3 715 aa10.47□□□□□ -0.73
USP11-201ENST00000218348 GAS8O95995 478 aa10.47□□□□□ -0.73
USP11-201ENST00000218348 CTSHP09668 335 aa10.47□□□□□ -0.73
USP11-201ENST00000218348 PROZP22891 400 aa10.47□□□□□ -0.73
USP11-201ENST00000218348 RAB27AP51159 221 aa10.47□□□□□ -0.73
USP11-201ENST00000218348 GAD2Q05329 585 aa10.47□□□□□ -0.73
USP11-201ENST00000218348 MTMR3Q13615 1198 aa10.47□□□□□ -0.73
USP11-201ENST00000218348 HIC1Q14526 733 aa10.47□□□□□ -0.73
USP11-201ENST00000218348 SLC5A9Q2M3M2 681 aa10.47□□□□□ -0.73
USP11-201ENST00000218348 ZNF484Q5JVG2 852 aa10.47□□□□□ -0.73
USP11-201ENST00000218348 LHX8Q68G74 356 aa10.47□□□□□ -0.73
USP11-201ENST00000218348 ANKRD42Q8N9B4 389 aa10.47□□□□□ -0.73
USP11-201ENST00000218348 OR6B3Q8NGW1 331 aa10.47□□□□□ -0.73
USP11-201ENST00000218348 MAGEB5Q9BZ81 275 aa10.47□□□□□ -0.73
USP11-201ENST00000218348 PABPC3Q9H361 631 aaKnown RBP10.47□□□□□ -0.73
USP11-201ENST00000218348 IP6K2Q9UHH9 426 aa10.47□□□□□ -0.73
USP11-201ENST00000218348 PIN4Q9Y237 131 aaKnown RBP10.47□□□□□ -0.73
USP11-201ENST00000218348 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.47□□□□□ -0.73
USP11-201ENST00000218348 PTCH2Q9Y6C5 1203 aa10.47□□□□□ -0.73
USP11-201ENST00000218348 TREHO43280 583 aa10.46□□□□□ -0.73
USP11-201ENST00000218348 B4GALT4O60513 344 aa10.46□□□□□ -0.73
USP11-201ENST00000218348 PPFIA4O75335 1185 aa10.46□□□□□ -0.73
USP11-201ENST00000218348 CYP2C9P11712 490 aa10.46□□□□□ -0.73
USP11-201ENST00000218348 ADORA2BP29275 332 aa10.46□□□□□ -0.73
USP11-201ENST00000218348 ZNF132P52740 706 aa10.46□□□□□ -0.73
USP11-201ENST00000218348 PRMT2P55345 433 aa10.46□□□□□ -0.73
USP11-201ENST00000218348 C1QBPQ07021 282 aaKnown RBP10.46□□□□□ -0.73
USP11-201ENST00000218348 GPS1Q13098 491 aa10.46□□□□□ -0.73
USP11-201ENST00000218348 CRYMQ14894 314 aa10.46□□□□□ -0.73
USP11-201ENST00000218348 ZNF618Q5T7W0 954 aa10.46□□□□□ -0.73
USP11-201ENST00000218348 IZUMO3Q5VZ72 239 aa10.46□□□□□ -0.73
USP11-201ENST00000218348 TRIM72Q6ZMU5 477 aa10.46□□□□□ -0.73
USP11-201ENST00000218348 ZC3H18Q86VM9 953 aaKnown RBP10.46□□□□□ -0.73
USP11-201ENST00000218348 SCUBE3Q8IX30 993 aa10.46□□□□□ -0.73
USP11-201ENST00000218348 RNF169Q8NCN4 708 aa10.46□□□□□ -0.73
USP11-201ENST00000218348 NDRG1Q92597 394 aaKnown RBP10.46□□□□□ -0.73
USP11-201ENST00000218348 MRPL45Q9BRJ2 306 aaKnown RBP10.46□□□□□ -0.73
USP11-201ENST00000218348 CENPOQ9BU64 300 aa10.46□□□□□ -0.73
USP11-201ENST00000218348 NGRNQ9NPE2 291 aaKnown RBP10.46□□□□□ -0.73
USP11-201ENST00000218348 TRIP11Q15643 1979 aa10.46□□□□□ -0.73
USP11-201ENST00000218348 HMGB1P1B2RPK0 211 aaPredicted RBP10.46□□□□□ -0.73
USP11-201ENST00000218348 MDH1P40925 334 aaKnown RBP10.46□□□□□ -0.73
USP11-201ENST00000218348 SLC1A1P43005 524 aa10.46□□□□□ -0.73
USP11-201ENST00000218348 ARSEP51690 589 aa10.46□□□□□ -0.73
USP11-201ENST00000218348 DGKDQ16760 1214 aa10.46□□□□□ -0.73
USP11-201ENST00000218348 FAM47CQ5HY64 1035 aa10.46□□□□□ -0.73
USP11-201ENST00000218348 C16orf87Q6PH81 154 aa10.46□□□□□ -0.73
USP11-201ENST00000218348 NPNTQ6UXI9 565 aa10.46□□□□□ -0.73
USP11-201ENST00000218348 TMEM40Q8WWA1 233 aa10.46□□□□□ -0.73
USP11-201ENST00000218348 TMEM176AQ96HP8 235 aa10.46□□□□□ -0.73
USP11-201ENST00000218348 FAM81BQ96LP2 452 aa10.46□□□□□ -0.73
USP11-201ENST00000218348 ABHD16BQ9H3Z7 469 aa10.46□□□□□ -0.73
USP11-201ENST00000218348 KCNK9Q9NPC2 374 aa10.46□□□□□ -0.73
USP11-201ENST00000218348 PAK6Q9NQU5 681 aaPredicted RBP10.46□□□□□ -0.73
USP11-201ENST00000218348 ATP8B3O60423 1300 aa10.46□□□□□ -0.74
USP11-201ENST00000218348 E5RJQ4 531 aa10.46□□□□□ -0.74
USP11-201ENST00000218348 GAS2O43903 313 aaKnown RBP10.46□□□□□ -0.74
USP11-201ENST00000218348 CST8O60676 142 aa10.46□□□□□ -0.74
USP11-201ENST00000218348 ADAMTS4O75173 837 aa10.46□□□□□ -0.74
USP11-201ENST00000218348 CALB1P05937 261 aa10.46□□□□□ -0.74
USP11-201ENST00000218348 SLC26A2P50443 739 aa10.46□□□□□ -0.74
USP11-201ENST00000218348 FOXD4Q12950 439 aaPredicted RBP10.46□□□□□ -0.74
USP11-201ENST00000218348 FASTKD3Q14CZ7 662 aaKnown RBP10.46□□□□□ -0.74
USP11-201ENST00000218348 SMAD1Q15797 465 aaKnown RBP10.46□□□□□ -0.74
USP11-201ENST00000218348 RNF187Q5TA31 235 aaPredicted RBP10.46□□□□□ -0.74
USP11-201ENST00000218348 ANKMY2Q8IV38 441 aa10.46□□□□□ -0.74
USP11-201ENST00000218348 EZH1Q92800 747 aaPredicted RBP10.46□□□□□ -0.74
USP11-201ENST00000218348 SLITRK1Q96PX8 696 aa10.46□□□□□ -0.74
USP11-201ENST00000218348 DPEP3Q9H4B8 488 aa10.46□□□□□ -0.74
USP11-201ENST00000218348 LRRC19Q9H756 370 aa10.46□□□□□ -0.74
USP11-201ENST00000218348 TSPAN16Q9UKR8 245 aa10.46□□□□□ -0.74
USP11-201ENST00000218348 MRPL42Q9Y6G3 142 aaKnown RBP10.46□□□□□ -0.74
USP11-201ENST00000218348 RIPK2O43353 540 aa10.45□□□□□ -0.74
USP11-201ENST00000218348 CYP3A5P20815 502 aa10.45□□□□□ -0.74
USP11-201ENST00000218348 CCND3P30281 292 aaPredicted RBP10.45□□□□□ -0.74
USP11-201ENST00000218348 HOXC8P31273 242 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms