RNA–Protein interactions for RNA: ENST00000217999.2

RHOXF1-201, Transcript of Rhox homeobox family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHOXF1, Length 769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF1-201ENST00000217999 CCL26Q9Y258 94 aa15.27■□□□□ 0.04
RHOXF1-201ENST00000217999 PTPRZ1P23471 2315 aaPredicted RBP15.27■□□□□ 0.03
RHOXF1-201ENST00000217999 GREB1Q4ZG55 1949 aa15.27■□□□□ 0.03
RHOXF1-201ENST00000217999 GVINP1Q7Z2Y8 2422 aa15.26■□□□□ 0.03
RHOXF1-201ENST00000217999 F8VP50 259 aa15.26■□□□□ 0.03
RHOXF1-201ENST00000217999 RTN3O95197 1032 aaPredicted RBP15.26■□□□□ 0.03
RHOXF1-201ENST00000217999 CHRNB1P11230 501 aa15.26■□□□□ 0.03
RHOXF1-201ENST00000217999 IFNAR2P48551 515 aa15.26■□□□□ 0.03
RHOXF1-201ENST00000217999 VAMP7P51809 220 aa15.26■□□□□ 0.03
RHOXF1-201ENST00000217999 ENPEPQ07075 957 aa15.26■□□□□ 0.03
RHOXF1-201ENST00000217999 TNK2Q07912 1038 aa15.26■□□□□ 0.03
RHOXF1-201ENST00000217999 GRSF1Q12849 480 aaKnown RBP eCLIP15.26■□□□□ 0.03
RHOXF1-201ENST00000217999 FZD5Q13467 585 aa15.26■□□□□ 0.03
RHOXF1-201ENST00000217999 RUNX3Q13761 415 aa15.26■□□□□ 0.03
RHOXF1-201ENST00000217999 PON2Q15165 354 aa15.26■□□□□ 0.03
RHOXF1-201ENST00000217999 ZACNQ401N2 412 aa15.26■□□□□ 0.03
RHOXF1-201ENST00000217999 FAM186BQ8IYM0 893 aa15.26■□□□□ 0.03
RHOXF1-201ENST00000217999 ZNF687Q8N1G0 1237 aa15.26■□□□□ 0.03
RHOXF1-201ENST00000217999 PDZD8Q8NEN9 1154 aa15.26■□□□□ 0.03
RHOXF1-201ENST00000217999 PLEKHO2Q8TD55 490 aa15.26■□□□□ 0.03
RHOXF1-201ENST00000217999 SMARCD1Q96GM5 515 aa15.26■□□□□ 0.03
RHOXF1-201ENST00000217999 LRRC3BQ96PB8 259 aa15.26■□□□□ 0.03
RHOXF1-201ENST00000217999 MED10Q9BTT4 135 aa15.26■□□□□ 0.03
RHOXF1-201ENST00000217999 TTLL2Q9BWV7 592 aa15.26■□□□□ 0.03
RHOXF1-201ENST00000217999 GDPD2Q9HCC8 539 aa15.26■□□□□ 0.03
RHOXF1-201ENST00000217999 RAB23Q9ULC3 237 aa15.26■□□□□ 0.03
RHOXF1-201ENST00000217999 USP34Q70CQ2 3546 aa15.26■□□□□ 0.03
RHOXF1-201ENST00000217999 STX10O60499 249 aa15.25■□□□□ 0.03
RHOXF1-201ENST00000217999 C4BPAP04003 597 aaKnown RBP15.25■□□□□ 0.03
RHOXF1-201ENST00000217999 PSMC2P35998 433 aaKnown RBP15.25■□□□□ 0.03
RHOXF1-201ENST00000217999 CXCL12P48061 93 aa15.25■□□□□ 0.03
RHOXF1-201ENST00000217999 NR1H3Q13133 447 aa15.25■□□□□ 0.03
RHOXF1-201ENST00000217999 ZNF77Q15935 545 aa15.25■□□□□ 0.03
RHOXF1-201ENST00000217999 EDRF1Q3B7T1 1238 aa15.25■□□□□ 0.03
RHOXF1-201ENST00000217999 FAM35AQ86V20 835 aa15.25■□□□□ 0.03
RHOXF1-201ENST00000217999 DDX42Q86XP3 938 aaKnown RBP eCLIP15.25■□□□□ 0.03
RHOXF1-201ENST00000217999 ARL14EPQ8N8R7 260 aaPredicted RBP15.25■□□□□ 0.03
RHOXF1-201ENST00000217999 ZBTB44Q8NCP5 570 aa15.25■□□□□ 0.03
RHOXF1-201ENST00000217999 RUBCNQ92622 972 aa15.25■□□□□ 0.03
RHOXF1-201ENST00000217999 FAM83CQ9BQN1 747 aa15.25■□□□□ 0.03
RHOXF1-201ENST00000217999 ZNF518BQ9C0D4 1074 aa15.25■□□□□ 0.03
RHOXF1-201ENST00000217999 DPEP3Q9H4B8 488 aa15.25■□□□□ 0.03
RHOXF1-201ENST00000217999 EBF3Q9H4W6 596 aa15.25■□□□□ 0.03
RHOXF1-201ENST00000217999 DMAP1Q9NPF5 467 aaPredicted RBP15.25■□□□□ 0.03
RHOXF1-201ENST00000217999 DUS2Q9NX74 493 aaKnown RBP15.25■□□□□ 0.03
RHOXF1-201ENST00000217999 NCDNQ9UBB6 729 aa15.25■□□□□ 0.03
RHOXF1-201ENST00000217999 ARHGAP26Q9UNA1 814 aa15.25■□□□□ 0.03
RHOXF1-201ENST00000217999 ANAPC1Q9H1A4 1944 aa15.25■□□□□ 0.03
RHOXF1-201ENST00000217999 SMC2O95347 1197 aa15.24■□□□□ 0.03
RHOXF1-201ENST00000217999 VNN1O95497 513 aa15.24■□□□□ 0.03
RHOXF1-201ENST00000217999 NFATC1O95644 943 aa15.24■□□□□ 0.03
RHOXF1-201ENST00000217999 EPB41P11171 864 aaKnown RBP15.24■□□□□ 0.03
RHOXF1-201ENST00000217999 TCF3P15923 654 aa15.24■□□□□ 0.03
RHOXF1-201ENST00000217999 HDCP19113 662 aa15.24■□□□□ 0.03
RHOXF1-201ENST00000217999 RAP1GAPP47736 663 aa15.24■□□□□ 0.03
RHOXF1-201ENST00000217999 DLG4P78352 724 aa15.24■□□□□ 0.03
RHOXF1-201ENST00000217999 IFRD2Q12894 506 aaPredicted RBP15.24■□□□□ 0.03
RHOXF1-201ENST00000217999 TXNDC11Q6PKC3 985 aa15.24■□□□□ 0.03
RHOXF1-201ENST00000217999 SV2AQ7L0J3 742 aa15.24■□□□□ 0.03
RHOXF1-201ENST00000217999 UNC93AQ86WB7 457 aa15.24■□□□□ 0.03
RHOXF1-201ENST00000217999 SH3RF2Q8TEC5 729 aa15.24■□□□□ 0.03
RHOXF1-201ENST00000217999 OSCP1Q8WVF1 389 aa15.24■□□□□ 0.03
RHOXF1-201ENST00000217999 OVCA2Q8WZ82 227 aa15.24■□□□□ 0.03
RHOXF1-201ENST00000217999 FBXO32Q969P5 355 aa15.24■□□□□ 0.03
RHOXF1-201ENST00000217999 TSG101Q99816 390 aa15.24■□□□□ 0.03
RHOXF1-201ENST00000217999 KRT82Q9NSB4 513 aa15.24■□□□□ 0.03
RHOXF1-201ENST00000217999 SMG5Q9UPR3 1016 aaKnown RBP15.24■□□□□ 0.03
RHOXF1-201ENST00000217999 MAPK8IP1Q9UQF2 711 aa15.24■□□□□ 0.03
RHOXF1-201ENST00000217999 MYO15AQ9UKN7 3530 aa15.23■□□□□ 0.03
RHOXF1-201ENST00000217999 C2orf78A6NCI8 922 aa15.23■□□□□ 0.03
RHOXF1-201ENST00000217999 ATG13O75143 517 aa15.23■□□□□ 0.03
RHOXF1-201ENST00000217999 PAPSS2O95340 614 aaPredicted RBP15.23■□□□□ 0.03
RHOXF1-201ENST00000217999 ABL1P00519 1130 aa15.23■□□□□ 0.03
RHOXF1-201ENST00000217999 ASS1P00966 412 aaKnown RBP15.23■□□□□ 0.03
RHOXF1-201ENST00000217999 HLA-DRAP01903 254 aa15.23■□□□□ 0.03
RHOXF1-201ENST00000217999 YWHAQP27348 245 aa15.23■□□□□ 0.03
RHOXF1-201ENST00000217999 ADAM9Q13443 819 aa15.23■□□□□ 0.03
RHOXF1-201ENST00000217999 CCINQ13939 588 aa15.23■□□□□ 0.03
RHOXF1-201ENST00000217999 TRIM68Q6AZZ1 485 aa15.23■□□□□ 0.03
RHOXF1-201ENST00000217999 TSSK4Q6SA08 328 aa15.23■□□□□ 0.03
RHOXF1-201ENST00000217999 NUP93Q8N1F7 819 aa15.23■□□□□ 0.03
RHOXF1-201ENST00000217999 KIAA1958Q8N8K9 716 aa15.23■□□□□ 0.03
RHOXF1-201ENST00000217999 CCDC26Q8TAB7 109 aa15.23■□□□□ 0.03
RHOXF1-201ENST00000217999 NELL1Q92832 810 aa15.23■□□□□ 0.03
RHOXF1-201ENST00000217999 B3GNT5Q9BYG0 378 aa15.23■□□□□ 0.03
RHOXF1-201ENST00000217999 EPC1Q9H2F5 836 aa15.23■□□□□ 0.03
RHOXF1-201ENST00000217999 HPS4Q9NQG7 708 aa15.23■□□□□ 0.03
RHOXF1-201ENST00000217999 RBM12Q9NTZ6 932 aaKnown RBP15.23■□□□□ 0.03
RHOXF1-201ENST00000217999 GCNT4Q9P109 453 aa15.23■□□□□ 0.03
RHOXF1-201ENST00000217999 VPS13AQ96RL7 3174 aa15.23■□□□□ 0.03
RHOXF1-201ENST00000217999 ZNF840PA6NDX5 716 aa15.22■□□□□ 0.03
RHOXF1-201ENST00000217999 SLC9A3R1O14745 358 aaPredicted RBP15.22■□□□□ 0.03
RHOXF1-201ENST00000217999 CETN3O15182 167 aa15.22■□□□□ 0.03
RHOXF1-201ENST00000217999 LILRB5O75023 590 aa15.22■□□□□ 0.03
RHOXF1-201ENST00000217999 AP1G2O75843 785 aa15.22■□□□□ 0.03
RHOXF1-201ENST00000217999 AKAP3O75969 853 aa15.22■□□□□ 0.03
RHOXF1-201ENST00000217999 TRIM49P0CI25 452 aa15.22■□□□□ 0.03
RHOXF1-201ENST00000217999 TRIM49CP0CI26 452 aa15.22■□□□□ 0.03
RHOXF1-201ENST00000217999 ARSAP15289 507 aa15.22■□□□□ 0.03
RHOXF1-201ENST00000217999 DRD1P21728 446 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms