RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 NUDCD1Q96RS6 583 aa13.92□□□□□ -0.18
SRP54-201ENST00000216774 C2orf40Q9H1Z8 148 aa13.92□□□□□ -0.18
SRP54-201ENST00000216774 C10orf88Q9H8K7 445 aa13.92□□□□□ -0.18
SRP54-201ENST00000216774 RSAD1Q9HA92 442 aa13.92□□□□□ -0.18
SRP54-201ENST00000216774 CYTH4Q9UIA0 394 aa13.92□□□□□ -0.18
SRP54-201ENST00000216774 LRRC42Q9Y546 428 aa13.92□□□□□ -0.18
SRP54-201ENST00000216774 TCRBV7S3A2A0A539 114 aa13.92□□□□□ -0.18
SRP54-201ENST00000216774 IL1BP01584 269 aa13.92□□□□□ -0.18
SRP54-201ENST00000216774 GM2AP17900 193 aa13.92□□□□□ -0.18
SRP54-201ENST00000216774 PROZP22891 400 aa13.92□□□□□ -0.18
SRP54-201ENST00000216774 MARK3P27448 753 aa13.92□□□□□ -0.18
SRP54-201ENST00000216774 PSMC4P43686 418 aa13.92□□□□□ -0.18
SRP54-201ENST00000216774 LAMTOR4Q0VGL1 99 aa13.92□□□□□ -0.18
SRP54-201ENST00000216774 DPYSL3Q14195 570 aa13.92□□□□□ -0.18
SRP54-201ENST00000216774 CMPK2Q5EBM0 449 aa13.92□□□□□ -0.18
SRP54-201ENST00000216774 TSHZ1Q6ZSZ6 1077 aa13.92□□□□□ -0.18
SRP54-201ENST00000216774 RFX6Q8HWS3 928 aa13.92□□□□□ -0.18
SRP54-201ENST00000216774 EXOC8Q8IYI6 725 aa13.92□□□□□ -0.18
SRP54-201ENST00000216774 APOPT1Q96IL0 206 aa13.92□□□□□ -0.18
SRP54-201ENST00000216774 BCO2Q9BYV7 579 aa13.92□□□□□ -0.18
SRP54-201ENST00000216774 SYNCQ9H7C4 482 aa13.92□□□□□ -0.18
SRP54-201ENST00000216774 SLC17A7Q9P2U7 560 aa13.92□□□□□ -0.18
SRP54-201ENST00000216774 LPXNO60711 386 aa13.91□□□□□ -0.18
SRP54-201ENST00000216774 CCDC22O60826 627 aa13.91□□□□□ -0.18
SRP54-201ENST00000216774 DNAJC6O75061 913 aa13.91□□□□□ -0.18
SRP54-201ENST00000216774 RNF8O76064 485 aa13.91□□□□□ -0.18
SRP54-201ENST00000216774 CD48P09326 243 aa13.91□□□□□ -0.18
SRP54-201ENST00000216774 RBP3P10745 1247 aa13.91□□□□□ -0.18
SRP54-201ENST00000216774 NEK3P51956 506 aa13.91□□□□□ -0.18
SRP54-201ENST00000216774 BASP1P80723 227 aaKnown RBP13.91□□□□□ -0.18
SRP54-201ENST00000216774 SLC18A2Q05940 514 aa13.91□□□□□ -0.18
SRP54-201ENST00000216774 FSTL1Q12841 308 aa13.91□□□□□ -0.18
SRP54-201ENST00000216774 TAF11Q15544 211 aa13.91□□□□□ -0.18
SRP54-201ENST00000216774 MPZL3Q6UWV2 235 aa13.91□□□□□ -0.18
SRP54-201ENST00000216774 SLC44A1Q8WWI5 657 aa13.91□□□□□ -0.18
SRP54-201ENST00000216774 CPXM1Q96SM3 734 aa13.91□□□□□ -0.18
SRP54-201ENST00000216774 TSSK1BQ9BXA7 367 aa13.91□□□□□ -0.18
SRP54-201ENST00000216774 METTL5Q9NRN9 209 aaKnown RBP13.91□□□□□ -0.18
SRP54-201ENST00000216774 KANSL3Q9P2N6 904 aa13.91□□□□□ -0.18
SRP54-201ENST00000216774 IKBKGQ9Y6K9 419 aa13.91□□□□□ -0.18
SRP54-201ENST00000216774 WDR91A4D1P6 747 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 TRUB2O95900 331 aaKnown RBP13.9□□□□□ -0.18
SRP54-201ENST00000216774 MIPP30301 263 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 PCK1P35558 622 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 ETV4P43268 484 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 GABRB2P47870 512 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 RAD23BP54727 409 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 ZNF200P98182 395 aaPredicted RBP13.9□□□□□ -0.18
SRP54-201ENST00000216774 ROR1Q01973 937 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 CNTN2Q02246 1040 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 PTK7Q13308 1070 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.9□□□□□ -0.18
SRP54-201ENST00000216774 TEX9Q8N6V9 391 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 RFWD2Q8NHY2 731 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 SPATA18Q8TC71 538 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 SEPT1Q8WYJ6 367 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 MCRS1Q96EZ8 462 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 NAF1Q96HR8 494 aaKnown RBP13.9□□□□□ -0.18
SRP54-201ENST00000216774 TRIM6Q9C030 488 aaPredicted RBP13.9□□□□□ -0.18
SRP54-201ENST00000216774 TJP2Q9UDY2 1190 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 DCTN4Q9UJW0 460 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 USP18Q9UMW8 372 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 MTO1Q9Y2Z2 717 aaKnown RBP13.9□□□□□ -0.18
SRP54-201ENST00000216774 TCRBV9S1A1TA0A576 114 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 GOLGA8RI6L899 631 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 FAM155BO75949 473 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 HAUS5O94927 633 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 IL18RAPO95256 599 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 ERBB2P04626 1255 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 SRGAP2CP0DJJ0 459 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 TGFB3P10600 412 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 EDNRBP24530 442 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 ELK3P41970 407 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 BLMHQ13867 455 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 SH2D5Q6ZV89 423 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 SAMD7Q7Z3H4 446 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 MICALL2Q8IY33 904 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 KIRREL3Q8IZU9 778 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 EMC1Q8N766 993 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 SLC4A11Q8NBS3 891 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 RNF149Q8NC42 400 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 PTCD3Q96EY7 689 aaKnown RBP13.9□□□□□ -0.18
SRP54-201ENST00000216774 FRMD8Q9BZ67 464 aaPredicted RBP13.9□□□□□ -0.18
SRP54-201ENST00000216774 DENND2DQ9H6A0 471 aaPredicted RBP13.9□□□□□ -0.18
SRP54-201ENST00000216774 DCLRE1BQ9H816 532 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 PTPRHQ9HD43 1115 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 PNPLA8Q9NP80 782 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 ASNSD1Q9NWL6 643 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 NXF1Q9UBU9 619 aaKnown RBP13.9□□□□□ -0.18
SRP54-201ENST00000216774 POLIQ9UNA4 740 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 CHMP2BQ9UQN3 213 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 TEX264Q9Y6I9 313 aa13.9□□□□□ -0.18
SRP54-201ENST00000216774 KLF11O14901 512 aa13.89□□□□□ -0.19
SRP54-201ENST00000216774 CHADO15335 359 aa13.89□□□□□ -0.19
SRP54-201ENST00000216774 PIAS1O75925 651 aa13.89□□□□□ -0.19
SRP54-201ENST00000216774 INHBAP08476 426 aa13.89□□□□□ -0.19
SRP54-201ENST00000216774 TCF7P36402 384 aaPredicted RBP13.89□□□□□ -0.19
SRP54-201ENST00000216774 KCNJ11Q14654 390 aa13.89□□□□□ -0.19
SRP54-201ENST00000216774 PRKD1Q15139 912 aaPredicted RBP13.89□□□□□ -0.19
SRP54-201ENST00000216774 NOMO1Q15155 1222 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms