RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 CCDC89Q8N998 374 aa18.28■□□□□ 0.52
VRK1-201ENST00000216639 BBOF1Q8ND07 529 aa18.28■□□□□ 0.52
VRK1-201ENST00000216639 FBXO25Q8TCJ0 367 aa18.28■□□□□ 0.52
VRK1-201ENST00000216639 CCHCR1Q8TD31 782 aa18.28■□□□□ 0.52
VRK1-201ENST00000216639 RXFP2Q8WXD0 754 aa18.28■□□□□ 0.52
VRK1-201ENST00000216639 PIK3R5Q8WYR1 880 aa18.28■□□□□ 0.52
VRK1-201ENST00000216639 ART4Q93070 314 aa18.28■□□□□ 0.52
VRK1-201ENST00000216639 SNF8Q96H20 258 aa18.28■□□□□ 0.52
VRK1-201ENST00000216639 GAD1Q99259 594 aa18.28■□□□□ 0.52
VRK1-201ENST00000216639 FAM204AQ9H8W3 233 aa18.28■□□□□ 0.52
VRK1-201ENST00000216639 GOLGA6AQ9NYA3 693 aa18.28■□□□□ 0.52
VRK1-201ENST00000216639 USP18Q9UMW8 372 aa18.28■□□□□ 0.52
VRK1-201ENST00000216639 PIK3R2O00459 728 aa18.27■□□□□ 0.52
VRK1-201ENST00000216639 DPYSL4O14531 572 aa18.27■□□□□ 0.52
VRK1-201ENST00000216639 ZNF623O75123 536 aa18.27■□□□□ 0.52
VRK1-201ENST00000216639 CAND2O75155 1236 aa18.27■□□□□ 0.52
VRK1-201ENST00000216639 ATF2P15336 505 aa18.27■□□□□ 0.52
VRK1-201ENST00000216639 LMO2P25791 158 aa18.27■□□□□ 0.52
VRK1-201ENST00000216639 ADORA2BP29275 332 aa18.27■□□□□ 0.52
VRK1-201ENST00000216639 MIPP30301 263 aa18.27■□□□□ 0.52
VRK1-201ENST00000216639 CD52P31358 61 aa18.27■□□□□ 0.52
VRK1-201ENST00000216639 RPL9P32969 192 aaKnown RBP18.27■□□□□ 0.52
VRK1-201ENST00000216639 ACLYP53396 1101 aa18.27■□□□□ 0.52
VRK1-201ENST00000216639 SLMAPQ14BN4 828 aa18.27■□□□□ 0.52
VRK1-201ENST00000216639 OLFML1Q6UWY5 402 aa18.27■□□□□ 0.52
VRK1-201ENST00000216639 GSTA5Q7RTV2 222 aa18.27■□□□□ 0.52
VRK1-201ENST00000216639 ANKS1BQ7Z6G8 1248 aa18.27■□□□□ 0.52
VRK1-201ENST00000216639 ARFGAP1Q8N6T3 406 aa18.27■□□□□ 0.52
VRK1-201ENST00000216639 TTC13Q8NBP0 860 aa18.27■□□□□ 0.52
VRK1-201ENST00000216639 PGBD4Q96DM1 585 aa18.27■□□□□ 0.52
VRK1-201ENST00000216639 GLT1D1Q96MS3 346 aa18.27■□□□□ 0.52
VRK1-201ENST00000216639 FRMD8P1Q9BZ68 369 aaPredicted RBP18.27■□□□□ 0.52
VRK1-201ENST00000216639 TSPYL1Q9H0U9 437 aa18.27■□□□□ 0.52
VRK1-201ENST00000216639 AGO3Q9H9G7 860 aaKnown RBP18.27■□□□□ 0.52
VRK1-201ENST00000216639 ATP8A1Q9Y2Q0 1164 aa18.27■□□□□ 0.52
VRK1-201ENST00000216639 SQORQ9Y6N5 450 aa18.27■□□□□ 0.52
VRK1-201ENST00000216639 ARL5CA6NH57 179 aa18.26■□□□□ 0.51
VRK1-201ENST00000216639 MOXD2PA6NHM9 499 aa18.26■□□□□ 0.51
VRK1-201ENST00000216639 TRUB2O95900 331 aaKnown RBP18.26■□□□□ 0.51
VRK1-201ENST00000216639 GHRP10912 638 aa18.26■□□□□ 0.51
VRK1-201ENST00000216639 CCDC130P13994 396 aa18.26■□□□□ 0.51
VRK1-201ENST00000216639 KDELR1P24390 212 aa18.26■□□□□ 0.51
VRK1-201ENST00000216639 SCNN1AP37088 669 aa18.26■□□□□ 0.51
VRK1-201ENST00000216639 BYSLQ13895 437 aaKnown RBP18.26■□□□□ 0.51
VRK1-201ENST00000216639 ARHGEF6Q15052 776 aa18.26■□□□□ 0.51
VRK1-201ENST00000216639 KCTD19Q17RG1 926 aaPredicted RBP18.26■□□□□ 0.51
VRK1-201ENST00000216639 FAM26DQ5JW98 314 aa18.26■□□□□ 0.51
VRK1-201ENST00000216639 TMEM86AQ8N2M4 240 aa18.26■□□□□ 0.51
VRK1-201ENST00000216639 KCTD6Q8NC69 237 aa18.26■□□□□ 0.51
VRK1-201ENST00000216639 B3GALNT2Q8NCR0 500 aa18.26■□□□□ 0.51
VRK1-201ENST00000216639 FAM76AQ8TAV0 307 aa18.26■□□□□ 0.51
VRK1-201ENST00000216639 HSFY1Q96LI6 401 aa18.26■□□□□ 0.51
VRK1-201ENST00000216639 UBN1Q9NPG3 1134 aa18.26■□□□□ 0.51
VRK1-201ENST00000216639 PRDM10Q9NQV6 1147 aa18.26■□□□□ 0.51
VRK1-201ENST00000216639 PCSK1NQ9UHG2 260 aa18.26■□□□□ 0.51
VRK1-201ENST00000216639 THSD7BQ9C0I4 1608 aa18.26■□□□□ 0.51
VRK1-201ENST00000216639 TULP2O00295 520 aa18.26■□□□□ 0.51
VRK1-201ENST00000216639 LIASO43766 372 aa18.26■□□□□ 0.51
VRK1-201ENST00000216639 IL1R2P27930 398 aa18.26■□□□□ 0.51
VRK1-201ENST00000216639 SDC4P31431 198 aa18.26■□□□□ 0.51
VRK1-201ENST00000216639 ADCY8P40145 1251 aa18.26■□□□□ 0.51
VRK1-201ENST00000216639 PMS2P54278 862 aa18.26■□□□□ 0.51
VRK1-201ENST00000216639 UAP1Q16222 522 aaPredicted RBP18.26■□□□□ 0.51
VRK1-201ENST00000216639 SMTNL2Q2TAL5 461 aa18.26■□□□□ 0.51
VRK1-201ENST00000216639 ZNF618Q5T7W0 954 aa18.26■□□□□ 0.51
VRK1-201ENST00000216639 GSTCDQ8NEC7 633 aa18.26■□□□□ 0.51
VRK1-201ENST00000216639 CMASQ8NFW8 434 aaPredicted RBP18.26■□□□□ 0.51
VRK1-201ENST00000216639 SLC2A14Q8TDB8 520 aa18.26■□□□□ 0.51
VRK1-201ENST00000216639 LPPQ93052 612 aa18.26■□□□□ 0.51
VRK1-201ENST00000216639 ACSF2Q96CM8 615 aaPredicted RBP18.26■□□□□ 0.51
VRK1-201ENST00000216639 TXLNGYQ9BZA5 131 aa18.26■□□□□ 0.51
VRK1-201ENST00000216639 PSD3Q9NYI0 1048 aa18.26■□□□□ 0.51
VRK1-201ENST00000216639 DRG1Q9Y295 367 aaKnown RBP18.26■□□□□ 0.51
VRK1-201ENST00000216639 C3orf70A6NLC5 250 aaPredicted RBP18.25■□□□□ 0.51
VRK1-201ENST00000216639 MEIS3P2A8K0S8 358 aa18.25■□□□□ 0.51
VRK1-201ENST00000216639 HCRTO43612 131 aa18.25■□□□□ 0.51
VRK1-201ENST00000216639 PRPSAP2O60256 369 aa18.25■□□□□ 0.51
VRK1-201ENST00000216639 KRT14P02533 472 aa18.25■□□□□ 0.51
VRK1-201ENST00000216639 LHX1P48742 406 aa18.25■□□□□ 0.51
VRK1-201ENST00000216639 GYS2P54840 703 aa18.25■□□□□ 0.51
VRK1-201ENST00000216639 EIF3BP55884 814 aaKnown RBP18.25■□□□□ 0.51
VRK1-201ENST00000216639 LPIN1Q14693 890 aa18.25■□□□□ 0.51
VRK1-201ENST00000216639 KCNT1Q5JUK3 1230 aa18.25■□□□□ 0.51
VRK1-201ENST00000216639 CEP85LQ5SZL2 805 aa18.25■□□□□ 0.51
VRK1-201ENST00000216639 AGMOQ6ZNB7 445 aa18.25■□□□□ 0.51
VRK1-201ENST00000216639 SCUBE3Q8IX30 993 aa18.25■□□□□ 0.51
VRK1-201ENST00000216639 SENP8Q96LD8 212 aa18.25■□□□□ 0.51
VRK1-201ENST00000216639 HNRNPABQ99729 332 aaKnown RBP18.25■□□□□ 0.51
VRK1-201ENST00000216639 TSEN34Q9BSV6 310 aaKnown RBP18.25■□□□□ 0.51
VRK1-201ENST00000216639 RSAD1Q9HA92 442 aa18.25■□□□□ 0.51
VRK1-201ENST00000216639 TRMT13Q9NUP7 481 aaKnown RBP18.25■□□□□ 0.51
VRK1-201ENST00000216639 ZNF148Q9UQR1 794 aa18.25■□□□□ 0.51
VRK1-201ENST00000216639 A0A0U1RQF3 1178 aa18.24■□□□□ 0.51
VRK1-201ENST00000216639 PAPSS1O43252 624 aaPredicted RBP18.24■□□□□ 0.51
VRK1-201ENST00000216639 GRAP2O75791 330 aa18.24■□□□□ 0.51
VRK1-201ENST00000216639 RPL34P49207 117 aaKnown RBP18.24■□□□□ 0.51
VRK1-201ENST00000216639 DSC3Q14574 896 aa18.24■□□□□ 0.51
VRK1-201ENST00000216639 WSCD1Q658N2 575 aa18.24■□□□□ 0.51
VRK1-201ENST00000216639 DSTYKQ6XUX3 929 aa18.24■□□□□ 0.51
VRK1-201ENST00000216639 OSTM1Q86WC4 334 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms