RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 ATP8B4Q8TF62 1192 aa14.06□□□□□ -0.16
SF3A1-201ENST00000215793 SPHKAPQ2M3C7 1700 aa14.06□□□□□ -0.16
SF3A1-201ENST00000215793 LSM8O95777 96 aaKnown RBP14.06□□□□□ -0.16
SF3A1-201ENST00000215793 ALBP02768 609 aa14.06□□□□□ -0.16
SF3A1-201ENST00000215793 THRAP10827 490 aa14.06□□□□□ -0.16
SF3A1-201ENST00000215793 CDH18Q13634 790 aa14.06□□□□□ -0.16
SF3A1-201ENST00000215793 GIT2Q14161 759 aa14.06□□□□□ -0.16
SF3A1-201ENST00000215793 CLEC16AQ2KHT3 1053 aa14.06□□□□□ -0.16
SF3A1-201ENST00000215793 LRRC34Q8IZ02 419 aa14.06□□□□□ -0.16
SF3A1-201ENST00000215793 CGRRF1Q99675 332 aa14.06□□□□□ -0.16
SF3A1-201ENST00000215793 LBHD1Q9BQE6 289 aaPredicted RBP14.06□□□□□ -0.16
SF3A1-201ENST00000215793 ABI2Q9NYB9 513 aaPredicted RBP14.06□□□□□ -0.16
SF3A1-201ENST00000215793 PHTF1Q9UMS5 762 aa14.06□□□□□ -0.16
SF3A1-201ENST00000215793 PRG3Q9Y2Y8 225 aaPredicted RBP14.06□□□□□ -0.16
SF3A1-201ENST00000215793 BCORL1Q5H9F3 1711 aa14.06□□□□□ -0.16
SF3A1-201ENST00000215793 C17orf102A2RUQ5 167 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 RSPH10B2B2RC85 870 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 B3GAT3O94766 335 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 SUPT7LO94864 414 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 SUPT20HL2P0C7V6 817 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 RSPH10BP0C881 870 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 DEFA1P59665 94 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 DEFA3P59666 94 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 SLC30A9Q6PML9 568 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 LAYNQ6UX15 382 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 PLEKHM3Q6ZWE6 761 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 MDM1Q8TC05 714 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 GMCL1Q96IK5 515 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 WWOXQ9NZC7 414 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 EIF3LQ9Y262 564 aaKnown RBP14.05□□□□□ -0.16
SF3A1-201ENST00000215793 DLC1Q96QB1 1528 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 RPLP2P05387 115 aaKnown RBP14.05□□□□□ -0.16
SF3A1-201ENST00000215793 CNTFP26441 200 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 SERPINB8P50452 374 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 SKIV2LQ15477 1246 aaKnown RBP14.05□□□□□ -0.16
SF3A1-201ENST00000215793 SGO1Q5FBB7 561 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 EXD1Q8NHP7 514 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 SGF29Q96ES7 293 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 CNPY3Q9BT09 278 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 SLC40A1Q9NP59 571 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 EXOSC4Q9NPD3 245 aaKnown RBP14.05□□□□□ -0.16
SF3A1-201ENST00000215793 DGKIO75912 1065 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 CD44P16070 742 aaKnown RBP14.05□□□□□ -0.16
SF3A1-201ENST00000215793 BCAT1P54687 386 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 PRAMEF18Q5VWM3 479 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 RNF180Q86T96 592 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 MICU2Q8IYU8 434 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 FBXO36Q8NEA4 188 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 SLC16A10Q8TF71 515 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 MTMR12Q9C0I1 747 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 EFCAB1Q9HAE3 211 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 SPASTQ9UBP0 616 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 TFR2Q9UP52 801 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 DOLKQ9UPQ8 538 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 CAPN6Q9Y6Q1 641 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 MADDQ8WXG6 1647 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 GPR182O15218 404 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 VPS26AO75436 327 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 NUDT2P50583 147 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 ATXN3P54252 364 aaPredicted RBP14.05□□□□□ -0.16
SF3A1-201ENST00000215793 MRPL28Q13084 256 aaKnown RBP14.05□□□□□ -0.16
SF3A1-201ENST00000215793 ITIH4Q14624 930 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 TMEM132BQ14DG7 1078 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 FAXCQ5TGI0 409 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 CACHD1Q5VU97 1274 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 ZFYVE19Q96K21 471 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 CBWD1Q9BRT8 395 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 IL1RL2Q9HB29 575 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 CYP3A43Q9HB55 503 aa14.05□□□□□ -0.16
SF3A1-201ENST00000215793 KANSL1LA0AUZ9 987 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 ZBTB39O15060 712 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 PROSCO94903 275 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 STAG3L1P0CL83 205 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 PSMA4P25789 261 aaKnown RBP14.04□□□□□ -0.16
SF3A1-201ENST00000215793 CPA2P48052 419 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 POLD3Q15054 466 aaPredicted RBP14.04□□□□□ -0.16
SF3A1-201ENST00000215793 ARHGAP15Q53QZ3 475 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 NLRP9Q7RTR0 991 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 PGBD3Q8N328 593 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 TUBGCP3Q96CW5 907 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 MAGEB18Q96M61 343 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 ZDHHC15Q96MV8 337 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 EHD4Q9H223 541 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 FBXO21O94952 628 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 VCAM1P19320 739 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 MMP14P50281 582 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 PMS1P54277 932 aaKnown RBP14.04□□□□□ -0.16
SF3A1-201ENST00000215793 CORO7P57737 925 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 CSTF3Q12996 717 aaKnown RBP14.04□□□□□ -0.16
SF3A1-201ENST00000215793 TP53BP2Q13625 1128 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 TRIM60Q495X7 471 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 SDE2Q6IQ49 451 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 KIAA2013Q8IYS2 634 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 ACSF2Q96CM8 615 aaPredicted RBP14.04□□□□□ -0.16
SF3A1-201ENST00000215793 KCTD10Q9H3F6 313 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 GPRC5CQ9NQ84 441 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 HEY2Q9UBP5 337 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 DTNAQ9Y4J8 743 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 PCDHB7Q9Y5E2 793 aa14.04□□□□□ -0.16
SF3A1-201ENST00000215793 hCG_2014768A0A024R1R8 64 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms