RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 ARHGEF18Q6ZSZ5 1173 aa13.77□□□□□ -0.21
CTNS-201ENST00000046640 ZC3H18Q86VM9 953 aaKnown RBP13.77□□□□□ -0.21
CTNS-201ENST00000046640 ALLCQ8N6M5 410 aa13.77□□□□□ -0.21
CTNS-201ENST00000046640 ERP27Q96DN0 273 aa13.77□□□□□ -0.21
CTNS-201ENST00000046640 MYLK2Q9H1R3 596 aa13.77□□□□□ -0.21
CTNS-201ENST00000046640 C12orf65Q9H3J6 166 aaKnown RBP13.77□□□□□ -0.21
CTNS-201ENST00000046640 BRCA2P51587 3418 aa13.77□□□□□ -0.21
CTNS-201ENST00000046640 DNALI1O14645 258 aaPredicted RBP13.77□□□□□ -0.21
CTNS-201ENST00000046640 TAC1P20366 129 aa13.77□□□□□ -0.21
CTNS-201ENST00000046640 NDST1P52848 882 aa13.77□□□□□ -0.21
CTNS-201ENST00000046640 WDR4P57081 412 aaKnown RBP13.77□□□□□ -0.21
CTNS-201ENST00000046640 GRM1Q13255 1194 aa13.77□□□□□ -0.21
CTNS-201ENST00000046640 ANKRD22Q5VYY1 191 aa13.77□□□□□ -0.21
CTNS-201ENST00000046640 NPNTQ6UXI9 565 aa13.77□□□□□ -0.21
CTNS-201ENST00000046640 XYLT1Q86Y38 959 aa13.77□□□□□ -0.21
CTNS-201ENST00000046640 RFX6Q8HWS3 928 aa13.77□□□□□ -0.21
CTNS-201ENST00000046640 CCDC33Q8N5R6 958 aa13.77□□□□□ -0.21
CTNS-201ENST00000046640 KCNN1Q92952 543 aa13.77□□□□□ -0.21
CTNS-201ENST00000046640 TMEM176AQ96HP8 235 aa13.77□□□□□ -0.21
CTNS-201ENST00000046640 RXFP1Q9HBX9 757 aa13.77□□□□□ -0.21
CTNS-201ENST00000046640 ALG13Q9NP73 1137 aaKnown RBP13.77□□□□□ -0.21
CTNS-201ENST00000046640 FAM49BQ9NUQ9 324 aa13.77□□□□□ -0.21
CTNS-201ENST00000046640 NOP53Q9NZM5 478 aaKnown RBP13.77□□□□□ -0.21
CTNS-201ENST00000046640 PCDHGC3Q9UN70 934 aa13.77□□□□□ -0.21
CTNS-201ENST00000046640 CCDC189A1A4V9 331 aa13.76□□□□□ -0.21
CTNS-201ENST00000046640 SIGLEC16A6NMB1 481 aa13.76□□□□□ -0.21
CTNS-201ENST00000046640 HCRTO43612 131 aa13.76□□□□□ -0.21
CTNS-201ENST00000046640 GAS2O43903 313 aaKnown RBP13.76□□□□□ -0.21
CTNS-201ENST00000046640 MIPP30301 263 aa13.76□□□□□ -0.21
CTNS-201ENST00000046640 VCPP55072 806 aaKnown RBP13.76□□□□□ -0.21
CTNS-201ENST00000046640 CAV1Q03135 178 aa13.76□□□□□ -0.21
CTNS-201ENST00000046640 PPIL2Q13356 520 aa13.76□□□□□ -0.21
CTNS-201ENST00000046640 PKN2Q16513 984 aaKnown RBP13.76□□□□□ -0.21
CTNS-201ENST00000046640 SCYL2Q6P3W7 929 aa13.76□□□□□ -0.21
CTNS-201ENST00000046640 ILDR2Q71H61 639 aa13.76□□□□□ -0.21
CTNS-201ENST00000046640 FAM71DQ8N9W8 422 aa13.76□□□□□ -0.21
CTNS-201ENST00000046640 ANKLE1Q8NAG6 615 aa13.76□□□□□ -0.21
CTNS-201ENST00000046640 SLC10A4Q96EP9 437 aa13.76□□□□□ -0.21
CTNS-201ENST00000046640 L3MBTL3Q96JM7 780 aaPredicted RBP13.76□□□□□ -0.21
CTNS-201ENST00000046640 ZNF570Q96NI8 536 aa13.76□□□□□ -0.21
CTNS-201ENST00000046640 APOL6Q9BWW8 343 aa13.76□□□□□ -0.21
CTNS-201ENST00000046640 ZNF518BQ9C0D4 1074 aa13.76□□□□□ -0.21
CTNS-201ENST00000046640 PRMT7Q9NVM4 692 aaPredicted RBP13.76□□□□□ -0.21
CTNS-201ENST00000046640 KCNH4Q9UQ05 1017 aa13.76□□□□□ -0.21
CTNS-201ENST00000046640 MGAMO43451 1857 aa13.76□□□□□ -0.21
CTNS-201ENST00000046640 C3orf70A6NLC5 250 aaPredicted RBP13.76□□□□□ -0.21
CTNS-201ENST00000046640 PPEF2O14830 753 aa13.76□□□□□ -0.21
CTNS-201ENST00000046640 YBX3P16989 372 aaKnown RBP eCLIP13.76□□□□□ -0.21
CTNS-201ENST00000046640 SLC25A11Q02978 314 aaKnown RBP13.76□□□□□ -0.21
CTNS-201ENST00000046640 OR6B2Q6IFH4 312 aa13.76□□□□□ -0.21
CTNS-201ENST00000046640 TAPT1Q6NXT6 567 aa13.76□□□□□ -0.21
CTNS-201ENST00000046640 FASTKD5Q7L8L6 764 aaKnown RBP13.76□□□□□ -0.21
CTNS-201ENST00000046640 ZCCHC9Q8N567 271 aaKnown RBP13.76□□□□□ -0.21
CTNS-201ENST00000046640 MICAL1Q8TDZ2 1067 aa13.76□□□□□ -0.21
CTNS-201ENST00000046640 KIF12Q96FN5 646 aa13.76□□□□□ -0.21
CTNS-201ENST00000046640 CCDC77Q9BR77 488 aa13.76□□□□□ -0.21
CTNS-201ENST00000046640 ADPGKQ9BRR6 497 aa13.76□□□□□ -0.21
CTNS-201ENST00000046640 MROH8Q9H579 483 aa13.76□□□□□ -0.21
CTNS-201ENST00000046640 GPATCH2LQ9NWQ4 482 aa13.76□□□□□ -0.21
CTNS-201ENST00000046640 TCRBV7S3A2A0A539 114 aa13.75□□□□□ -0.21
CTNS-201ENST00000046640 H3BRB1 525 aa13.75□□□□□ -0.21
CTNS-201ENST00000046640 GOLGA8RI6L899 631 aa13.75□□□□□ -0.21
CTNS-201ENST00000046640 MED7O43513 233 aa13.75□□□□□ -0.21
CTNS-201ENST00000046640 CDH16O75309 829 aa13.75□□□□□ -0.21
CTNS-201ENST00000046640 EPHX2P34913 555 aa13.75□□□□□ -0.21
CTNS-201ENST00000046640 TMEM132DQ14C87 1099 aa13.75□□□□□ -0.21
CTNS-201ENST00000046640 EFTUD2Q15029 972 aaKnown RBP eCLIP13.75□□□□□ -0.21
CTNS-201ENST00000046640 OASLQ15646 514 aaKnown RBP13.75□□□□□ -0.21
CTNS-201ENST00000046640 UNC45BQ8IWX7 931 aa13.75□□□□□ -0.21
CTNS-201ENST00000046640 MAGEB18Q96M61 343 aa13.75□□□□□ -0.21
CTNS-201ENST00000046640 KLF6Q99612 283 aaPredicted RBP13.75□□□□□ -0.21
CTNS-201ENST00000046640 TUT1Q9H6E5 874 aaKnown RBP13.75□□□□□ -0.21
CTNS-201ENST00000046640 EBF2Q9HAK2 575 aa13.75□□□□□ -0.21
CTNS-201ENST00000046640 SETD4Q9NVD3 440 aa13.75□□□□□ -0.21
CTNS-201ENST00000046640 NKX1-2Q9UD57 310 aaPredicted RBP13.75□□□□□ -0.21
CTNS-201ENST00000046640 STRIP2Q9ULQ0 834 aa13.75□□□□□ -0.21
CTNS-201ENST00000046640 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.75□□□□□ -0.21
CTNS-201ENST00000046640 CLEC11AQ9Y240 323 aa13.75□□□□□ -0.21
CTNS-201ENST00000046640 OTOFQ9HC10 1997 aa13.75□□□□□ -0.21
CTNS-201ENST00000046640 A0A1W2PPM1 405 aa13.75□□□□□ -0.21
CTNS-201ENST00000046640 E5RJQ4 531 aa13.75□□□□□ -0.21
CTNS-201ENST00000046640 CILPO75339 1184 aa13.75□□□□□ -0.21
CTNS-201ENST00000046640 KDELR1P24390 212 aa13.75□□□□□ -0.21
CTNS-201ENST00000046640 SSTR1P30872 391 aa13.75□□□□□ -0.21
CTNS-201ENST00000046640 PEX19P40855 299 aa13.75□□□□□ -0.21
CTNS-201ENST00000046640 CTCFP49711 727 aaPredicted RBP13.75□□□□□ -0.21
CTNS-201ENST00000046640 IL9RQ01113 521 aa13.75□□□□□ -0.21
CTNS-201ENST00000046640 LMNB2Q03252 620 aa13.75□□□□□ -0.21
CTNS-201ENST00000046640 MSS51Q4VC12 460 aa13.75□□□□□ -0.21
CTNS-201ENST00000046640 BBOF1Q8ND07 529 aa13.75□□□□□ -0.21
CTNS-201ENST00000046640 RSAD2Q8WXG1 361 aa13.75□□□□□ -0.21
CTNS-201ENST00000046640 BCO2Q9BYV7 579 aa13.75□□□□□ -0.21
CTNS-201ENST00000046640 DPP3Q9NY33 737 aa13.75□□□□□ -0.21
CTNS-201ENST00000046640 PHTF1Q9UMS5 762 aa13.75□□□□□ -0.21
CTNS-201ENST00000046640 KAT6AQ92794 2004 aa13.75□□□□□ -0.21
CTNS-201ENST00000046640 ASB14A6NK59 587 aa13.74□□□□□ -0.21
CTNS-201ENST00000046640 IL18RAPO95256 599 aa13.74□□□□□ -0.21
CTNS-201ENST00000046640 CBX6O95503 412 aa13.74□□□□□ -0.21
CTNS-201ENST00000046640 CYP3A5P20815 502 aa13.74□□□□□ -0.21
CTNS-201ENST00000046640 CDH5P33151 784 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms