RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 WDR3Q9UNX4 943 aaKnown RBP eCLIP24.05■■□□□ 1.44
TARBP1-201ENST00000040877 LOC102724159A0A0B4J2E5 919 aa24.05■■□□□ 1.44
TARBP1-201ENST00000040877 TRIM66O15016 1216 aa24.05■■□□□ 1.44
TARBP1-201ENST00000040877 URODP06132 367 aa24.05■■□□□ 1.44
TARBP1-201ENST00000040877 CDH2P19022 906 aaPredicted RBP24.05■■□□□ 1.44
TARBP1-201ENST00000040877 C1QBPQ07021 282 aaKnown RBP24.05■■□□□ 1.44
TARBP1-201ENST00000040877 PWP2Q15269 919 aaKnown RBP24.05■■□□□ 1.44
TARBP1-201ENST00000040877 CTXN3Q4LDR2 81 aa24.05■■□□□ 1.44
TARBP1-201ENST00000040877 ZRANB3Q5FWF4 1079 aa24.05■■□□□ 1.44
TARBP1-201ENST00000040877 APOBEC3HQ6NTF7 200 aaKnown RBP24.05■■□□□ 1.44
TARBP1-201ENST00000040877 LRRC6Q86X45 466 aa24.05■■□□□ 1.44
TARBP1-201ENST00000040877 WHRNQ9P202 907 aa24.05■■□□□ 1.44
TARBP1-201ENST00000040877 DPP7Q9UHL4 492 aa24.05■■□□□ 1.44
TARBP1-201ENST00000040877 PGBD3Q8N328 593 aa24.05■■□□□ 1.44
TARBP1-201ENST00000040877 ACTRT1Q8TDG2 376 aa24.05■■□□□ 1.44
TARBP1-201ENST00000040877 E2F7Q96AV8 911 aa24.05■■□□□ 1.44
TARBP1-201ENST00000040877 ZIM3Q96PE6 472 aa24.05■■□□□ 1.44
TARBP1-201ENST00000040877 CDK5RAP1Q96SZ6 601 aaKnown RBP24.05■■□□□ 1.44
TARBP1-201ENST00000040877 PABPC3Q9H361 631 aaKnown RBP24.05■■□□□ 1.44
TARBP1-201ENST00000040877 STARD7Q9NQZ5 370 aa24.05■■□□□ 1.44
TARBP1-201ENST00000040877 RHOBTB1O94844 696 aa24.04■■□□□ 1.44
TARBP1-201ENST00000040877 FOXD4Q12950 439 aaPredicted RBP24.04■■□□□ 1.44
TARBP1-201ENST00000040877 TMEM119Q4V9L6 283 aa24.04■■□□□ 1.44
TARBP1-201ENST00000040877 C6orf10Q5SRN2 563 aa24.04■■□□□ 1.44
TARBP1-201ENST00000040877 INSRRP14616 1297 aa24.04■■□□□ 1.44
TARBP1-201ENST00000040877 KDSRQ06136 332 aa24.04■■□□□ 1.44
TARBP1-201ENST00000040877 NOA1Q8NC60 698 aaKnown RBP24.04■■□□□ 1.44
TARBP1-201ENST00000040877 FAM172AQ8WUF8 416 aa24.04■■□□□ 1.44
TARBP1-201ENST00000040877 HEATR9A2RTY3 570 aa24.04■■□□□ 1.44
TARBP1-201ENST00000040877 SPDYE5A6NIY4 337 aa24.04■■□□□ 1.44
TARBP1-201ENST00000040877 C5orf58C9J3I9 102 aa24.04■■□□□ 1.44
TARBP1-201ENST00000040877 ENO1P06733 434 aaKnown RBP24.04■■□□□ 1.44
TARBP1-201ENST00000040877 MAP3K10Q02779 954 aa24.04■■□□□ 1.44
TARBP1-201ENST00000040877 SPDYE7PQ495Y7 208 aa24.04■■□□□ 1.44
TARBP1-201ENST00000040877 CPA4Q9UI42 421 aa24.04■■□□□ 1.44
TARBP1-201ENST00000040877 NCAM2O15394 837 aa24.04■■□□□ 1.44
TARBP1-201ENST00000040877 CHRM3P20309 590 aa24.04■■□□□ 1.44
TARBP1-201ENST00000040877 YY1P25490 414 aa24.04■■□□□ 1.44
TARBP1-201ENST00000040877 PLA2G4AP47712 749 aa24.04■■□□□ 1.44
TARBP1-201ENST00000040877 ALDH5A1P51649 535 aaPredicted RBP24.04■■□□□ 1.44
TARBP1-201ENST00000040877 VCPP55072 806 aaKnown RBP24.04■■□□□ 1.44
TARBP1-201ENST00000040877 ZNF410Q86VK4 478 aa24.04■■□□□ 1.44
TARBP1-201ENST00000040877 REPS2Q8NFH8 660 aa24.04■■□□□ 1.44
TARBP1-201ENST00000040877 KLC4Q9NSK0 619 aa24.04■■□□□ 1.44
TARBP1-201ENST00000040877 SCHIP1Q9P0W5 487 aaPredicted RBP24.04■■□□□ 1.44
TARBP1-201ENST00000040877 FRMPD4Q14CM0 1322 aa24.04■■□□□ 1.44
TARBP1-201ENST00000040877 FAM95CA0A1B0GW59 222 aa24.03■■□□□ 1.44
TARBP1-201ENST00000040877 CYP3A4P08684 503 aa24.03■■□□□ 1.44
TARBP1-201ENST00000040877 MYL6P60660 151 aa24.03■■□□□ 1.44
TARBP1-201ENST00000040877 SLC29A2Q14542 456 aa24.03■■□□□ 1.44
TARBP1-201ENST00000040877 GRIK4Q16099 956 aa24.03■■□□□ 1.44
TARBP1-201ENST00000040877 AMHR2Q16671 573 aa24.03■■□□□ 1.44
TARBP1-201ENST00000040877 PKN3Q6P5Z2 889 aa24.03■■□□□ 1.44
TARBP1-201ENST00000040877 TGM2P21980 687 aa24.03■■□□□ 1.44
TARBP1-201ENST00000040877 OTOP1Q7RTM1 612 aa24.03■■□□□ 1.44
TARBP1-201ENST00000040877 ADCK2Q7Z695 626 aa24.03■■□□□ 1.44
TARBP1-201ENST00000040877 CCDC126Q96EE4 140 aa24.03■■□□□ 1.44
TARBP1-201ENST00000040877 SLC39A10Q9ULF5 831 aa24.03■■□□□ 1.44
TARBP1-201ENST00000040877 TIMM44O43615 452 aa24.03■■□□□ 1.44
TARBP1-201ENST00000040877 CLEC16AQ2KHT3 1053 aa24.03■■□□□ 1.44
TARBP1-201ENST00000040877 C11orf63Q6NUN7 778 aa24.03■■□□□ 1.44
TARBP1-201ENST00000040877 LVRNQ6Q4G3 990 aa24.03■■□□□ 1.44
TARBP1-201ENST00000040877 DDX42Q86XP3 938 aaKnown RBP eCLIP24.03■■□□□ 1.44
TARBP1-201ENST00000040877 ZDHHC17Q8IUH5 632 aa24.03■■□□□ 1.44
TARBP1-201ENST00000040877 GID8Q9NWU2 228 aa24.03■■□□□ 1.44
TARBP1-201ENST00000040877 ABRAQ8N0Z2 381 aa24.02■■□□□ 1.44
TARBP1-201ENST00000040877 TAGAPQ8N103 731 aa24.02■■□□□ 1.44
TARBP1-201ENST00000040877 VPS37AQ8NEZ2 397 aa24.02■■□□□ 1.44
TARBP1-201ENST00000040877 L3MBTL3Q96JM7 780 aaPredicted RBP24.02■■□□□ 1.44
TARBP1-201ENST00000040877 SDR42E2A6NKP2 422 aa24.02■■□□□ 1.44
TARBP1-201ENST00000040877 TRPC5OSA6NMA1 111 aa24.02■■□□□ 1.44
TARBP1-201ENST00000040877 RAD23BP54727 409 aa24.02■■□□□ 1.44
TARBP1-201ENST00000040877 FBXW4P57775 412 aa24.02■■□□□ 1.44
TARBP1-201ENST00000040877 AGAP9Q5VTM2 703 aa24.02■■□□□ 1.44
TARBP1-201ENST00000040877 PAPD7Q5XG87 772 aaKnown RBP24.02■■□□□ 1.44
TARBP1-201ENST00000040877 UBE2OQ9C0C9 1292 aaKnown RBP24.02■■□□□ 1.44
TARBP1-201ENST00000040877 GAKO14976 1311 aa24.02■■□□□ 1.44
TARBP1-201ENST00000040877 PMPCBO75439 489 aa24.02■■□□□ 1.44
TARBP1-201ENST00000040877 SRP72O76094 671 aaKnown RBP24.02■■□□□ 1.44
TARBP1-201ENST00000040877 GCNT1Q02742 428 aa24.02■■□□□ 1.44
TARBP1-201ENST00000040877 MED21Q13503 144 aa24.02■■□□□ 1.44
TARBP1-201ENST00000040877 VCPIP1Q96JH7 1222 aa24.02■■□□□ 1.44
TARBP1-201ENST00000040877 MANSC1Q9H8J5 431 aa24.02■■□□□ 1.44
TARBP1-201ENST00000040877 BARX2Q9UMQ3 279 aaPredicted RBP24.02■■□□□ 1.44
TARBP1-201ENST00000040877 H2AFYO75367 372 aaKnown RBP24.02■■□□□ 1.44
TARBP1-201ENST00000040877 AKR1A1P14550 325 aa24.02■■□□□ 1.44
TARBP1-201ENST00000040877 SNX31Q8N9S9 440 aa24.02■■□□□ 1.44
TARBP1-201ENST00000040877 TBCBQ99426 244 aa24.02■■□□□ 1.44
TARBP1-201ENST00000040877 NEUROG2Q9H2A3 272 aa24.02■■□□□ 1.44
TARBP1-201ENST00000040877 DRG1Q9Y295 367 aaKnown RBP24.02■■□□□ 1.44
TARBP1-201ENST00000040877 RRM1P23921 792 aa24.01■■□□□ 1.43
TARBP1-201ENST00000040877 SLC27A1Q6PCB7 646 aa24.01■■□□□ 1.43
TARBP1-201ENST00000040877 LRRC40Q9H9A6 602 aa24.01■■□□□ 1.43
TARBP1-201ENST00000040877 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.01■■□□□ 1.43
TARBP1-201ENST00000040877 DOLKQ9UPQ8 538 aa24.01■■□□□ 1.43
TARBP1-201ENST00000040877 RPS6KL1Q9Y6S9 549 aa24.01■■□□□ 1.43
TARBP1-201ENST00000040877 TRIM49D1C9J1S8 452 aa24.01■■□□□ 1.43
TARBP1-201ENST00000040877 GLRA3O75311 464 aa24.01■■□□□ 1.43
TARBP1-201ENST00000040877 DDNO94850 711 aaPredicted RBP24.01■■□□□ 1.43
TARBP1-201ENST00000040877 SLITRK3O94933 977 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms