RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 RBM12Q9NTZ6 932 aaKnown RBP23.23■■□□□ 1.31
HOXC8-201ENST00000040584 COG5Q9UP83 839 aa23.23■■□□□ 1.31
HOXC8-201ENST00000040584 PTPRSQ13332 1948 aa23.23■■□□□ 1.31
HOXC8-201ENST00000040584 MYBL1P10243 752 aa23.22■■□□□ 1.31
HOXC8-201ENST00000040584 HADHBP55084 474 aaKnown RBP23.22■■□□□ 1.31
HOXC8-201ENST00000040584 C1QBPQ07021 282 aaKnown RBP23.22■■□□□ 1.31
HOXC8-201ENST00000040584 FUT10Q6P4F1 479 aa23.22■■□□□ 1.31
HOXC8-201ENST00000040584 CEP57Q86XR8 500 aa23.22■■□□□ 1.31
HOXC8-201ENST00000040584 OR10T2Q8NGX3 314 aa23.22■■□□□ 1.31
HOXC8-201ENST00000040584 TPCN2Q8NHX9 752 aa23.22■■□□□ 1.31
HOXC8-201ENST00000040584 ACBD6Q9BR61 282 aa23.22■■□□□ 1.31
HOXC8-201ENST00000040584 HESX1Q9UBX0 185 aa23.22■■□□□ 1.31
HOXC8-201ENST00000040584 CNOT8Q9UFF9 292 aaKnown RBP23.22■■□□□ 1.31
HOXC8-201ENST00000040584 SF3B1O75533 1304 aaKnown RBP eCLIP23.22■■□□□ 1.31
HOXC8-201ENST00000040584 CLDN5O00501 218 aa23.22■■□□□ 1.31
HOXC8-201ENST00000040584 HSF2BPO75031 334 aa23.22■■□□□ 1.31
HOXC8-201ENST00000040584 RRM1P23921 792 aa23.22■■□□□ 1.31
HOXC8-201ENST00000040584 PKDCCQ504Y2 493 aa23.22■■□□□ 1.31
HOXC8-201ENST00000040584 ERICH1Q86X53 443 aa23.22■■□□□ 1.31
HOXC8-201ENST00000040584 CMTR2Q8IYT2 770 aaKnown RBP23.22■■□□□ 1.31
HOXC8-201ENST00000040584 FUKQ8N0W3 1084 aa23.22■■□□□ 1.31
HOXC8-201ENST00000040584 THEM5Q8N1Q8 247 aa23.22■■□□□ 1.31
HOXC8-201ENST00000040584 LRRC57Q8N9N7 239 aa23.22■■□□□ 1.31
HOXC8-201ENST00000040584 FAM76AQ8TAV0 307 aa23.22■■□□□ 1.31
HOXC8-201ENST00000040584 HDAC7Q8WUI4 952 aa23.22■■□□□ 1.31
HOXC8-201ENST00000040584 B3GALT6Q96L58 329 aa23.22■■□□□ 1.31
HOXC8-201ENST00000040584 TMEM209Q96SK2 561 aa23.22■■□□□ 1.31
HOXC8-201ENST00000040584 AVENQ9NQS1 362 aaPredicted RBP23.22■■□□□ 1.31
HOXC8-201ENST00000040584 MRPL42Q9Y6G3 142 aaKnown RBP23.22■■□□□ 1.31
HOXC8-201ENST00000040584 MYH10P35580 1976 aa23.21■■□□□ 1.31
HOXC8-201ENST00000040584 AGPSO00116 658 aa23.21■■□□□ 1.31
HOXC8-201ENST00000040584 MTA2O94776 668 aa23.21■■□□□ 1.31
HOXC8-201ENST00000040584 PTPN20Q4JDL3 420 aa23.21■■□□□ 1.31
HOXC8-201ENST00000040584 RUFY1Q96T51 708 aa23.21■■□□□ 1.31
HOXC8-201ENST00000040584 PSMB7Q99436 277 aa23.21■■□□□ 1.31
HOXC8-201ENST00000040584 LBHD1Q9BQE6 289 aaPredicted RBP23.21■■□□□ 1.31
HOXC8-201ENST00000040584 TSPYL1Q9H0U9 437 aa23.21■■□□□ 1.31
HOXC8-201ENST00000040584 CTTNBP2NLQ9P2B4 639 aa23.21■■□□□ 1.31
HOXC8-201ENST00000040584 TJP2Q9UDY2 1190 aa23.21■■□□□ 1.31
HOXC8-201ENST00000040584 TULP2O00295 520 aa23.2■■□□□ 1.3
HOXC8-201ENST00000040584 SYN3O14994 580 aa23.2■■□□□ 1.3
HOXC8-201ENST00000040584 GJB5O95377 273 aa23.2■■□□□ 1.3
HOXC8-201ENST00000040584 KCNT2Q6UVM3 1135 aa23.2■■□□□ 1.3
HOXC8-201ENST00000040584 PAQR9Q6ZVX9 377 aa23.2■■□□□ 1.3
HOXC8-201ENST00000040584 ANKRD52Q8NB46 1076 aa23.2■■□□□ 1.3
HOXC8-201ENST00000040584 ACTRT1Q8TDG2 376 aa23.2■■□□□ 1.3
HOXC8-201ENST00000040584 CALR3Q96L12 384 aaKnown RBP23.2■■□□□ 1.3
HOXC8-201ENST00000040584 CPXM1Q96SM3 734 aa23.2■■□□□ 1.3
HOXC8-201ENST00000040584 HNRNPABQ99729 332 aaKnown RBP23.2■■□□□ 1.3
HOXC8-201ENST00000040584 SH3GL2Q99962 352 aa23.2■■□□□ 1.3
HOXC8-201ENST00000040584 B3GNT5Q9BYG0 378 aa23.2■■□□□ 1.3
HOXC8-201ENST00000040584 OAZ2O95190 189 aa23.19■■□□□ 1.3
HOXC8-201ENST00000040584 FTCDO95954 541 aa23.19■■□□□ 1.3
HOXC8-201ENST00000040584 PDE4CQ08493 712 aa23.19■■□□□ 1.3
HOXC8-201ENST00000040584 PDCLQ13371 301 aa23.19■■□□□ 1.3
HOXC8-201ENST00000040584 INTS6LQ5JSJ4 861 aaKnown RBP23.19■■□□□ 1.3
HOXC8-201ENST00000040584 VARS2Q5ST30 1063 aaKnown RBP23.19■■□□□ 1.3
HOXC8-201ENST00000040584 CYP4A22Q5TCH4 519 aa23.19■■□□□ 1.3
HOXC8-201ENST00000040584 LIN9Q5TKA1 542 aa23.19■■□□□ 1.3
HOXC8-201ENST00000040584 TAS1R1Q7RTX1 841 aa23.19■■□□□ 1.3
HOXC8-201ENST00000040584 MYCBPAPQ8TBZ2 947 aa23.19■■□□□ 1.3
HOXC8-201ENST00000040584 HERVK_113Q902F9 699 aa23.19■■□□□ 1.3
HOXC8-201ENST00000040584 PCED1BQ96HM7 432 aa23.19■■□□□ 1.3
HOXC8-201ENST00000040584 MED10Q9BTT4 135 aa23.19■■□□□ 1.3
HOXC8-201ENST00000040584 NUP85Q9BW27 656 aa23.19■■□□□ 1.3
HOXC8-201ENST00000040584 UVRAGQ9P2Y5 699 aa23.19■■□□□ 1.3
HOXC8-201ENST00000040584 TMEM59LQ9UK28 342 aa23.19■■□□□ 1.3
HOXC8-201ENST00000040584 LAMA2P24043 3122 aaKnown RBP23.19■■□□□ 1.3
HOXC8-201ENST00000040584 GOLGA6CA6NDK9 693 aa23.19■■□□□ 1.3
HOXC8-201ENST00000040584 GOLGA6DP0CG33 693 aa23.19■■□□□ 1.3
HOXC8-201ENST00000040584 FGFR3P22607 806 aa23.19■■□□□ 1.3
HOXC8-201ENST00000040584 SLC7A5Q01650 507 aa23.19■■□□□ 1.3
HOXC8-201ENST00000040584 SLFN11Q7Z7L1 901 aa23.19■■□□□ 1.3
HOXC8-201ENST00000040584 LRRTM3Q86VH5 581 aa23.19■■□□□ 1.3
HOXC8-201ENST00000040584 MREGQ8N565 214 aa23.19■■□□□ 1.3
HOXC8-201ENST00000040584 SLC35F5Q8WV83 523 aa23.19■■□□□ 1.3
HOXC8-201ENST00000040584 IGSF21Q96ID5 467 aa23.19■■□□□ 1.3
HOXC8-201ENST00000040584 MS4A14Q96JA4 679 aa23.19■■□□□ 1.3
HOXC8-201ENST00000040584 ZBED2Q9BTP6 218 aa23.19■■□□□ 1.3
HOXC8-201ENST00000040584 GOLGA6AQ9NYA3 693 aa23.19■■□□□ 1.3
HOXC8-201ENST00000040584 VWA8A3KMH1 1905 aa23.18■■□□□ 1.3
HOXC8-201ENST00000040584 CALB1P05937 261 aa23.18■■□□□ 1.3
HOXC8-201ENST00000040584 RGS7P49802 495 aa23.18■■□□□ 1.3
HOXC8-201ENST00000040584 ELAVL2Q12926 359 aaKnown RBP23.18■■□□□ 1.3
HOXC8-201ENST00000040584 PMF1Q6P1K2 205 aa23.18■■□□□ 1.3
HOXC8-201ENST00000040584 FAM171BQ6P995 826 aa23.18■■□□□ 1.3
HOXC8-201ENST00000040584 GSPT2Q8IYD1 628 aaKnown RBP23.18■■□□□ 1.3
HOXC8-201ENST00000040584 ZNF558Q96NG5 402 aa23.18■■□□□ 1.3
HOXC8-201ENST00000040584 SYNCQ9H7C4 482 aa23.18■■□□□ 1.3
HOXC8-201ENST00000040584 TMLHEQ9NVH6 421 aa23.18■■□□□ 1.3
HOXC8-201ENST00000040584 SLC4A7Q9Y6M7 1214 aa23.18■■□□□ 1.3
HOXC8-201ENST00000040584 PIK3R2O00459 728 aa23.17■■□□□ 1.3
HOXC8-201ENST00000040584 BUB1BO60566 1050 aaPredicted RBP23.17■■□□□ 1.3
HOXC8-201ENST00000040584 ERBB2P04626 1255 aa23.17■■□□□ 1.3
HOXC8-201ENST00000040584 BCAT1P54687 386 aa23.17■■□□□ 1.3
HOXC8-201ENST00000040584 TSPY1Q01534 308 aa23.17■■□□□ 1.3
HOXC8-201ENST00000040584 BST2Q10589 180 aaKnown RBP23.17■■□□□ 1.3
HOXC8-201ENST00000040584 C18orf8Q96DM3 657 aa23.17■■□□□ 1.3
HOXC8-201ENST00000040584 PKMYT1Q99640 499 aa23.17■■□□□ 1.3
HOXC8-201ENST00000040584 GOLPH3Q9H4A6 298 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms