RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 HSFY1Q96LI6 401 aa15.04■□□□□ -0
RTFDC1-201ENST00000023939 GAD1Q99259 594 aa15.04■□□□□ -0
RTFDC1-201ENST00000023939 HNRNPABQ99729 332 aaKnown RBP15.04■□□□□ -0
RTFDC1-201ENST00000023939 VPS18Q9P253 973 aa15.04■□□□□ -0
RTFDC1-201ENST00000023939 DRG1Q9Y295 367 aaKnown RBP15.04■□□□□ -0
RTFDC1-201ENST00000023939 A0A0U1RQF3 1178 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 LRRD1A4D1F6 860 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 PI4K2BG5E9Z4 385 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 H0YGN5 161 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 TULP2O00295 520 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 CYB561D2O14569 222 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 LIASO43766 372 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 GABBR2O75899 941 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 TRUB2O95900 331 aaKnown RBP15.03■□□□□ -0
RTFDC1-201ENST00000023939 SKIP12755 728 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 ITIH2P19823 946 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 IVDP26440 423 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 MIPP30301 263 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 PLTPP55058 493 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 DHX9Q08211 1270 aaKnown RBP15.03■□□□□ -0
RTFDC1-201ENST00000023939 LLGL1Q15334 1064 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 ODF2Q5BJF6 829 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 TRNP1Q6NT89 227 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 OSTM1Q86WC4 334 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 TMEM86AQ8N2M4 240 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 SPATA18Q8TC71 538 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 FBXO25Q8TCJ0 367 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 RXFP2Q8WXD0 754 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 RIN2Q8WYP3 895 aaPredicted RBP15.03■□□□□ -0
RTFDC1-201ENST00000023939 NKD2Q969F2 451 aaPredicted RBP15.03■□□□□ -0
RTFDC1-201ENST00000023939 UBN1Q9NPG3 1134 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 KLHL11Q9NVR0 708 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 PSD3Q9NYI0 1048 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 MTRF1LQ9UGC7 380 aaKnown RBP15.03■□□□□ -0
RTFDC1-201ENST00000023939 ADAM21Q9UKJ8 722 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 PTPN22Q9Y2R2 807 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 NFS1Q9Y697 457 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 ARL5CA6NH57 179 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 MEIS3P2A8K0S8 358 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 INPPL1O15357 1258 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 PAPSS1O43252 624 aaPredicted RBP15.03■□□□□ -0
RTFDC1-201ENST00000023939 TRPA1O75762 1119 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 ENDOD1O94919 500 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 PDGFRBP09619 1106 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 PDGFRAP16234 1089 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 KDELR1P24390 212 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 CD52P31358 61 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 CAV1Q03135 178 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 ADCY2Q08462 1091 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 SNX1Q13596 522 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 ZNF618Q5T7W0 954 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 BBS12Q6ZW61 710 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 SLC26A9Q7LBE3 791 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 SLC43A3Q8NBI5 491 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 B3GALNT2Q8NCR0 500 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 RAET1EQ8TD07 263 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 CCHCR1Q8TD31 782 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 USP18Q9UMW8 372 aa15.03■□□□□ -0
RTFDC1-201ENST00000023939 TP73O15350 636 aa15.02□□□□□ -0.01
RTFDC1-201ENST00000023939 HCRTO43612 131 aa15.02□□□□□ -0.01
RTFDC1-201ENST00000023939 GHRP10912 638 aa15.02□□□□□ -0.01
RTFDC1-201ENST00000023939 KRT10P13645 584 aa15.02□□□□□ -0.01
RTFDC1-201ENST00000023939 RGS7P49802 495 aa15.02□□□□□ -0.01
RTFDC1-201ENST00000023939 PRMT2P55345 433 aa15.02□□□□□ -0.01
RTFDC1-201ENST00000023939 CALCOCO2Q13137 446 aa15.02□□□□□ -0.01
RTFDC1-201ENST00000023939 ZFYVE27Q5T4F4 411 aa15.02□□□□□ -0.01
RTFDC1-201ENST00000023939 RHBDF2Q6PJF5 856 aa15.02□□□□□ -0.01
RTFDC1-201ENST00000023939 VSIG1Q86XK7 387 aa15.02□□□□□ -0.01
RTFDC1-201ENST00000023939 CCDC89Q8N998 374 aa15.02□□□□□ -0.01
RTFDC1-201ENST00000023939 TTC13Q8NBP0 860 aa15.02□□□□□ -0.01
RTFDC1-201ENST00000023939 BBOF1Q8ND07 529 aa15.02□□□□□ -0.01
RTFDC1-201ENST00000023939 PGBD4Q96DM1 585 aa15.02□□□□□ -0.01
RTFDC1-201ENST00000023939 SNF8Q96H20 258 aa15.02□□□□□ -0.01
RTFDC1-201ENST00000023939 PIWIL1Q96J94 861 aaKnown RBP15.02□□□□□ -0.01
RTFDC1-201ENST00000023939 SENP8Q96LD8 212 aa15.02□□□□□ -0.01
RTFDC1-201ENST00000023939 OSBPL7Q9BZF2 842 aa15.02□□□□□ -0.01
RTFDC1-201ENST00000023939 TSPYL1Q9H0U9 437 aa15.02□□□□□ -0.01
RTFDC1-201ENST00000023939 MIOSQ9NXC5 875 aa15.02□□□□□ -0.01
RTFDC1-201ENST00000023939 PLAAQ9Y263 795 aa15.02□□□□□ -0.01
RTFDC1-201ENST00000023939 XPO1O14980 1071 aaKnown RBP15.01□□□□□ -0.01
RTFDC1-201ENST00000023939 MGEA5O60502 916 aa15.01□□□□□ -0.01
RTFDC1-201ENST00000023939 CCDC130P13994 396 aa15.01□□□□□ -0.01
RTFDC1-201ENST00000023939 PTPN9P43378 593 aa15.01□□□□□ -0.01
RTFDC1-201ENST00000023939 LHX1P48742 406 aa15.01□□□□□ -0.01
RTFDC1-201ENST00000023939 APLP1P51693 650 aa15.01□□□□□ -0.01
RTFDC1-201ENST00000023939 SLMAPQ14BN4 828 aa15.01□□□□□ -0.01
RTFDC1-201ENST00000023939 ARHGEF6Q15052 776 aa15.01□□□□□ -0.01
RTFDC1-201ENST00000023939 CCDC14Q49A88 953 aa15.01□□□□□ -0.01
RTFDC1-201ENST00000023939 WSCD1Q658N2 575 aa15.01□□□□□ -0.01
RTFDC1-201ENST00000023939 LHX8Q68G74 356 aa15.01□□□□□ -0.01
RTFDC1-201ENST00000023939 CYP4V2Q6ZWL3 525 aaPredicted RBP15.01□□□□□ -0.01
RTFDC1-201ENST00000023939 SLAIN1Q8ND83 568 aa15.01□□□□□ -0.01
RTFDC1-201ENST00000023939 SLC35B2Q8TB61 432 aa15.01□□□□□ -0.01
RTFDC1-201ENST00000023939 SLC2A14Q8TDB8 520 aa15.01□□□□□ -0.01
RTFDC1-201ENST00000023939 TEKT4Q8WW24 435 aa15.01□□□□□ -0.01
RTFDC1-201ENST00000023939 GLT1D1Q96MS3 346 aa15.01□□□□□ -0.01
RTFDC1-201ENST00000023939 TBCBQ99426 244 aa15.01□□□□□ -0.01
RTFDC1-201ENST00000023939 ZWILCHQ9H900 591 aa15.01□□□□□ -0.01
RTFDC1-201ENST00000023939 TRMT13Q9NUP7 481 aaKnown RBP15.01□□□□□ -0.01
RTFDC1-201ENST00000023939 NOD1Q9Y239 953 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms