RNA–Protein interactions for RNA: ENSMUST00000173727.7

Lig3-212, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-212ENSMUST00000173727 Rasgrf1P27671 1262 aa11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Stmn1P54227 149 aaKnown RBP11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Gm5168Q4KL04 211 aa11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Scube3Q66PY1 993 aa11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Ntrk3Q6VNS1 825 aa11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 March4Q80TE3 409 aa11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Fbxw21Q8BI38 468 aa11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Anapc5Q8BTZ4 740 aa11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Q8BZE1 841 aa11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Pcdhb2Q91Y00 799 aa11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Mcrs1Q99L90 462 aa11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Fuca1Q99LJ1 452 aa11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Slc25a11Q9CR62 314 aaKnown RBP11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 CactinQ9CS00 772 aaKnown RBP11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Ddx24Q9ESV0 857 aaKnown RBP11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Stat2Q9WVL2 923 aa11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Zc3h4Q6ZPZ3 1304 aaKnown RBP11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Gm3383J3QQ59 259 aa11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Ppm1jQ149T7 507 aa11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Vps51Q3UVL4 782 aa11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Fsd1lQ8BYN5 507 aa11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Zswim3Q8CFL8 695 aa11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Sdcbp2Q99JZ0 292 aa11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Acbd6Q9D061 282 aa11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Rabl3Q9D4V7 236 aa11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Slc40a1Q9JHI9 570 aa11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Cetn2Q9R1K9 172 aa11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Zdbf2Q5SS00 2493 aaKnown RBP11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Edil3O35474 480 aa11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Gdap1O88741 358 aa11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 IvlP48997 467 aa11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Q3TQQ9 903 aa11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Phactr4Q501J7 694 aa11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Tcf4Q60722 670 aa11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Pick1Q62083 416 aa11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Olfr1105Q7TR58 312 aa11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Rassf6Q80UQ2 353 aa11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Arhgap11aQ80Y19 987 aa11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Zdhhc19Q810M5 347 aa11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Pak4Q8BTW9 593 aa11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Pak2Q8CIN4 524 aa11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 NamptQ99KQ4 491 aa11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Fuca2Q99KR8 461 aa11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Fbxo17Q9QZM8 286 aa11.32□□□□□ -0.6
Lig3-212ENSMUST00000173727 Casp8ap2Q9WUF3 1962 aa11.31□□□□□ -0.6
Lig3-212ENSMUST00000173727 Bpifb9bA2AJD1 591 aa11.31□□□□□ -0.6
Lig3-212ENSMUST00000173727 Gm6583E9Q8Z1 469 aa11.31□□□□□ -0.6
Lig3-212ENSMUST00000173727 Myl1P05977 188 aa11.31□□□□□ -0.6
Lig3-212ENSMUST00000173727 Lamp2P17047 415 aa11.31□□□□□ -0.6
Lig3-212ENSMUST00000173727 Yy1Q00899 414 aa11.31□□□□□ -0.6
Lig3-212ENSMUST00000173727 Crhr2Q60748 411 aa11.31□□□□□ -0.6
Lig3-212ENSMUST00000173727 Bpifb9aQ80XI7 591 aa11.31□□□□□ -0.6
Lig3-212ENSMUST00000173727 Ankrd45Q810N6 248 aa11.31□□□□□ -0.6
Lig3-212ENSMUST00000173727 Snx14Q8BHY8 964 aa11.31□□□□□ -0.6
Lig3-212ENSMUST00000173727 Lrrc42Q8R2U7 421 aa11.31□□□□□ -0.6
Lig3-212ENSMUST00000173727 Afg3l1Q920A7 789 aaKnown RBP11.31□□□□□ -0.6
Lig3-212ENSMUST00000173727 Krt16Q9Z2K1 469 aa11.31□□□□□ -0.6
Lig3-212ENSMUST00000173727 Lipo2D3YY49 398 aa11.31□□□□□ -0.6
Lig3-212ENSMUST00000173727 Eftud2O08810 971 aaKnown RBP11.31□□□□□ -0.6
Lig3-212ENSMUST00000173727 Gdf6P43028 454 aa11.31□□□□□ -0.6
Lig3-212ENSMUST00000173727 Opa1P58281 960 aa11.31□□□□□ -0.6
Lig3-212ENSMUST00000173727 Acsbg2Q2XU92 667 aa11.31□□□□□ -0.6
Lig3-212ENSMUST00000173727 TraddQ3U0V2 310 aa11.31□□□□□ -0.6
Lig3-212ENSMUST00000173727 P3h1Q3V1T4 739 aa11.31□□□□□ -0.6
Lig3-212ENSMUST00000173727 Cyth4Q80YW0 393 aa11.31□□□□□ -0.6
Lig3-212ENSMUST00000173727 Senp2Q91ZX6 588 aa11.31□□□□□ -0.6
Lig3-212ENSMUST00000173727 Cpb2Q9JHH6 422 aa11.31□□□□□ -0.6
Lig3-212ENSMUST00000173727 Psmg1Q9JK23 289 aa11.31□□□□□ -0.6
Lig3-212ENSMUST00000173727 Nr1h3Q9Z0Y9 445 aa11.31□□□□□ -0.6
Lig3-212ENSMUST00000173727 Grik3B1AS29 919 aa11.3□□□□□ -0.6
Lig3-212ENSMUST00000173727 Gm8369E9PZI3 166 aa11.3□□□□□ -0.6
Lig3-212ENSMUST00000173727 XntrpcF8VQM8 1264 aa11.3□□□□□ -0.6
Lig3-212ENSMUST00000173727 DffaO54786 331 aa11.3□□□□□ -0.6
Lig3-212ENSMUST00000173727 Uchl4P58321 233 aa11.3□□□□□ -0.6
Lig3-212ENSMUST00000173727 RalaP63321 206 aa11.3□□□□□ -0.6
Lig3-212ENSMUST00000173727 Sppl2bQ3TD49 578 aa11.3□□□□□ -0.6
Lig3-212ENSMUST00000173727 Ndufaf2Q59J78 168 aa11.3□□□□□ -0.6
Lig3-212ENSMUST00000173727 Oca2Q62052 833 aa11.3□□□□□ -0.6
Lig3-212ENSMUST00000173727 Kiaa1841Q68FF0 718 aa11.3□□□□□ -0.6
Lig3-212ENSMUST00000173727 GmipQ6PGG2 971 aa11.3□□□□□ -0.6
Lig3-212ENSMUST00000173727 Prl3a1Q78Y73 227 aa11.3□□□□□ -0.6
Lig3-212ENSMUST00000173727 Polr2eQ80UW8 210 aaKnown RBP11.3□□□□□ -0.6
Lig3-212ENSMUST00000173727 Nipal1Q8BMW7 416 aa11.3□□□□□ -0.6
Lig3-212ENSMUST00000173727 Ppm1kQ8BXN7 372 aa11.3□□□□□ -0.6
Lig3-212ENSMUST00000173727 Cfap36Q8C6E0 343 aa11.3□□□□□ -0.6
Lig3-212ENSMUST00000173727 Actl9Q8CG27 415 aa11.3□□□□□ -0.6
Lig3-212ENSMUST00000173727 Kat14Q8CID0 779 aa11.3□□□□□ -0.6
Lig3-212ENSMUST00000173727 Ace2Q8R0I0 805 aa11.3□□□□□ -0.6
Lig3-212ENSMUST00000173727 Itgbl1Q8VDV0 494 aa11.3□□□□□ -0.6
Lig3-212ENSMUST00000173727 Pcdhb1Q91Y08 818 aa11.3□□□□□ -0.6
Lig3-212ENSMUST00000173727 Ubxn11Q9D572 484 aa11.3□□□□□ -0.6
Lig3-212ENSMUST00000173727 Ftsj3Q9DBE9 838 aaKnown RBP11.3□□□□□ -0.6
Lig3-212ENSMUST00000173727 Pck1Q9Z2V4 622 aa11.3□□□□□ -0.6
Lig3-212ENSMUST00000173727 Zfp236S4R299 1847 aa11.3□□□□□ -0.6
Lig3-212ENSMUST00000173727 Plxna1P70206 1894 aa11.3□□□□□ -0.6
Lig3-212ENSMUST00000173727 Rasal2E9PW37 1286 aa11.3□□□□□ -0.6
Lig3-212ENSMUST00000173727 MycP01108 439 aa11.3□□□□□ -0.6
Lig3-212ENSMUST00000173727 Krt19P19001 403 aa11.3□□□□□ -0.6
Lig3-212ENSMUST00000173727 FpgsP48760 587 aa11.3□□□□□ -0.6
Lig3-212ENSMUST00000173727 B3gat3P58158 335 aa11.3□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 20.1 ms