RNA–Protein interactions for RNA: ENSMUST00000111438.1

Ddx55-202, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

TSL 2 BASIC

Gene Ddx55, Length 2,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-202ENSMUST00000111438 Unc5bQ8K1S3 945 aa12.89□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Fam151aQ8QZW3 608 aa12.89□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Ssr1Q9CY50 286 aaKnown RBP12.89□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Syf2Q9D198 242 aaKnown RBP12.89□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Cul2Q9D4H8 745 aa12.89□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Ccdc91Q9D8L5 442 aa12.89□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Nup210Q9QY81 1886 aaKnown RBP12.89□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Btbd18A0A0A6YY25 723 aa12.88□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Kcng1A2BDX4 514 aa12.88□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Calhm3J3QMI4 347 aa12.88□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Itm2bO89051 266 aa12.88□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Mybl1P51960 751 aa12.88□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Gabrb2P63137 512 aa12.88□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Smarcad1Q04692 1021 aa12.88□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Rnf40Q3U319 1001 aa12.88□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Scube3Q66PY1 993 aa12.88□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Mvb12bQ6KAU4 317 aa12.88□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Snd1Q78PY7 910 aaKnown RBP12.88□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Prl3a1Q78Y73 227 aa12.88□□□□□ -0.35
Ddx55-202ENSMUST00000111438 GancQ8BVW0 898 aa12.88□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Arhgef33Q8BW86 850 aa12.88□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Commd10Q8JZY2 202 aa12.88□□□□□ -0.35
Ddx55-202ENSMUST00000111438 D8Ertd738eQ8R1F0 94 aa12.88□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Tcf25Q8R3L2 676 aaKnown RBP12.88□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Pcdhb2Q91Y00 799 aa12.88□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Pcdhb19Q91Y01 801 aa12.88□□□□□ -0.35
Ddx55-202ENSMUST00000111438 AdarQ99MU3 1178 aaKnown RBP12.88□□□□□ -0.35
Ddx55-202ENSMUST00000111438 KynuQ9CXF0 464 aa12.88□□□□□ -0.35
Ddx55-202ENSMUST00000111438 St6galnac4Q9R2B6 360 aa12.88□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Anapc7Q9WVM3 565 aa12.88□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Gcom1E9PZ54 550 aa12.88□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Kdelc2G5E897 503 aa12.88□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Mup13L7N222 235 aa12.88□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Ap1g2O88512 791 aa12.88□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Itgb1P09055 798 aaKnown RBP12.88□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Cul4aQ3TCH7 759 aa12.88□□□□□ -0.35
Ddx55-202ENSMUST00000111438 MyzapQ3UIJ9 466 aa12.88□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Tmc8Q7TN58 722 aa12.88□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Ppfibp1Q8C8U0 969 aaKnown RBP12.88□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Tmem132cQ8CEF9 1099 aa12.88□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Fam114a2Q8VE88 497 aa12.88□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Rsph1Q8VIG3 301 aa12.88□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Osbpl1aQ91XL9 950 aa12.88□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Bbs5Q9CZQ9 341 aa12.88□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Cnot8Q9D8X5 292 aa12.88□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Mta2Q9R190 668 aa12.88□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Zfp384E9Q1A5 584 aaKnown RBP12.87□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Vmn2r77L7N2B7 854 aa12.87□□□□□ -0.35
Ddx55-202ENSMUST00000111438 BhmtO35490 407 aaKnown RBP12.87□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Trappc3O55013 180 aa12.87□□□□□ -0.35
Ddx55-202ENSMUST00000111438 TertO70372 1122 aa12.87□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Myl1P05977 188 aa12.87□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Enpp1P06802 906 aa12.87□□□□□ -0.35
Ddx55-202ENSMUST00000111438 MylpfP97457 169 aa12.87□□□□□ -0.35
Ddx55-202ENSMUST00000111438 LbrQ3U9G9 626 aaKnown RBP12.87□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Enpp3Q6DYE8 874 aa12.87□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Stk40Q7TNL3 435 aa12.87□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Tmem161aQ8VCA6 480 aa12.87□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Ccdc71Q8VEG0 433 aa12.87□□□□□ -0.35
Ddx55-202ENSMUST00000111438 DeraQ91YP3 318 aa12.87□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Ddx56Q9D0R4 546 aaKnown RBP12.87□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Tspan3Q9QY33 253 aa12.87□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Wdr54Q9R0D8 334 aa12.87□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Bnip3lQ9Z2F7 218 aa12.87□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Apol11aE9PZG0 334 aa12.87□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Gp6P0C191 313 aa12.87□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Zrsr2Q62377 462 aaKnown RBP12.87□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Pde1cQ64338 706 aa12.87□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Cdc23Q8BGZ4 597 aa12.87□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Rhpn2Q8BWR8 686 aa12.87□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Q8BZE1 841 aa12.87□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Ccdc186Q8C9S4 917 aa12.87□□□□□ -0.35
Ddx55-202ENSMUST00000111438 A430089I19RikQ8C9W1 407 aa12.87□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Krt222Q8CCX5 294 aa12.87□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Acvr1cQ8K348 493 aa12.87□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Prrg2Q8R182 198 aa12.87□□□□□ -0.35
Ddx55-202ENSMUST00000111438 SarafQ8R3Q0 334 aa12.87□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Trap1Q9CQN1 706 aaKnown RBP12.87□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Ly6kQ9CWP4 154 aa12.87□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Cfap57Q9D180 1249 aa12.87□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Spata17Q9D552 379 aa12.87□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Erap1Q9EQH2 930 aa12.87□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Trpv2Q9WTR1 756 aa12.87□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Zfp990B1AVN5 605 aa12.86□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Gm1661E9Q963 441 aa12.86□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Cacna2d1O08532 1103 aa12.86□□□□□ -0.35
Ddx55-202ENSMUST00000111438 CaluO35887 315 aa12.86□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Dmp1O55188 503 aa12.86□□□□□ -0.35
Ddx55-202ENSMUST00000111438 TktP40142 623 aaKnown RBP12.86□□□□□ -0.35
Ddx55-202ENSMUST00000111438 GssP51855 474 aa12.86□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Gsdmc2Q2KHK6 480 aa12.86□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Fubp3Q3TIX6 575 aaKnown RBP12.86□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Gsdmc4Q3TR54 480 aa12.86□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Pik3r6Q3U6Q4 756 aa12.86□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Ccdc125Q5U465 500 aa12.86□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Mapre1Q61166 268 aaKnown RBP12.86□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Csnk1g1Q8BTH8 459 aa12.86□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Gsdmc3Q8CB12 480 aa12.86□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Cyp2d26Q8CIM7 500 aa12.86□□□□□ -0.35
Ddx55-202ENSMUST00000111438 Mcoln2Q8K595 566 aa12.86□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 96.4 ms